Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475025

Identifier: 113475025

GI number: 113475025

Start: 1962194

End: 1962499

Strand: Reverse

Name: 113475025

Synonym: Tery_1279

Alternate gene names: NA

Gene position: 1962499-1962194 (Counterclockwise)

Preceding gene: 113475026

Following gene: 113475024

Centisome position: 25.32

GC content: 28.43

Gene sequence:

>306_bases
TTGACAGAAATAGAATTGATAGTTGATAGTACAGAACAGGATATATTCAGGCCAAAAAATGATGGAAAGCAGAAAAAATA
TTACTCAGGAAAGCAAAAAAGTCATAGGTTAAAAAATCAAATAATAATCACAGATAATGGAAAAAAAATAGTTGATGTAA
TAGTAGGAGAAAGAGGTCCAGAGAGTGATATAATTTTATTCAAAAAACAACAAAAAAAGTTTGATAAAGAACAAAGATTT
CAAGGAGATAAAGGTTATCAAGGTGGGTCAAGAATTGACAGGCCAAAGAAAAAAAATAAACCATAA

Upstream 100 bases:

>100_bases
TTTTCAGGCTTTGGAGCGATATTTTGATGGAATTATTACCATCTAGTTTACTAGAGGAATTCTCGGGAAAAAAAACGAAT
ATTTATGGATAAAAGAAGCT

Downstream 100 bases:

>100_bases
AATGTCATACAAAGTAAAGAAAGAGAATCAAAAAAAAGCTCAAAAAATAATATTTGTAGAACATGTAATAAGACTGATAA
AAATATTTAAAGTGGCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTEIELIVDSTEQDIFRPKNDGKQKKYYSGKQKSHRLKNQIIITDNGKKIVDVIVGERGPESDIILFKKQQKKFDKEQRF
QGDKGYQGGSRIDRPKKKNKP

Sequences:

>Translated_101_residues
MTEIELIVDSTEQDIFRPKNDGKQKKYYSGKQKSHRLKNQIIITDNGKKIVDVIVGERGPESDIILFKKQQKKFDKEQRF
QGDKGYQGGSRIDRPKKKNKP
>Mature_100_residues
TEIELIVDSTEQDIFRPKNDGKQKKYYSGKQKSHRLKNQIIITDNGKKIVDVIVGERGPESDIILFKKQQKKFDKEQRFQ
GDKGYQGGSRIDRPKKKNKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11779; Mature: 11647

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIELIVDSTEQDIFRPKNDGKQKKYYSGKQKSHRLKNQIIITDNGKKIVDVIVGERGP
CCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEEEECCCCC
ESDIILFKKQQKKFDKEQRFQGDKGYQGGSRIDRPKKKNKP
CCCEEEEECHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEIELIVDSTEQDIFRPKNDGKQKKYYSGKQKSHRLKNQIIITDNGKKIVDVIVGERGP
CCEEEEEECCCHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEEEECCCCC
ESDIILFKKQQKKFDKEQRFQGDKGYQGGSRIDRPKKKNKP
CCCEEEEECHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA