| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is psaI [H]
Identifier: 113474973
GI number: 113474973
Start: 1879465
End: 1879581
Strand: Direct
Name: psaI [H]
Synonym: Tery_1205
Alternate gene names: 113474973
Gene position: 1879465-1879581 (Clockwise)
Preceding gene: 113474972
Following gene: 113474974
Centisome position: 24.25
GC content: 35.04
Gene sequence:
>117_bases ATGACTGGTTCTTATGCAGCATCTTACTTACCTTGGATTTTAATTCCTGTAGTTACTTGGTTAATGCCAATTATAGTTAT GGGTTTATTGTTTGTCTATATTGAGAGCGATGCCTAG
Upstream 100 bases:
>100_bases TTTTTTAATCCCCTATTCAAGGGGAAATTTGATAGCTTGTTTTTCGGTAAAATTAGGCGATCGCTTAATTTGAAATTATG TAATTGAAGGAGAATTTGAA
Downstream 100 bases:
>100_bases TTTATTAATTAGTTATCAGTTATTAGTGATCAGTAAACAGTCATCCGAGTGAAGCTAAAAACTTGATAATAAAAAATCTA ATATTTTTGTTATTCCCTTA
Product: photosystem I reaction center subunit VIII
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 37
Protein sequence:
>38_residues MTGSYAASYLPWILIPVVTWLMPIIVMGLLFVYIESDA
Sequences:
>Translated_38_residues MTGSYAASYLPWILIPVVTWLMPIIVMGLLFVYIESDA >Mature_37_residues TGSYAASYLPWILIPVVTWLMPIIVMGLLFVYIESDA
Specific function: May help in the organization of the psaL subunit [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001302 [H]
Pfam domain/function: PF00796 PSI_8 [H]
EC number: NA
Molecular weight: Translated: 4275; Mature: 4144
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSYAASYLPWILIPVVTWLMPIIVMGLLFVYIESDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGSYAASYLPWILIPVVTWLMPIIVMGLLFVYIESDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA