Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474942

Identifier: 113474942

GI number: 113474942

Start: 1829938

End: 1830477

Strand: Reverse

Name: 113474942

Synonym: Tery_1169

Alternate gene names: NA

Gene position: 1830477-1829938 (Counterclockwise)

Preceding gene: 113474943

Following gene: 113474938

Centisome position: 23.62

GC content: 37.04

Gene sequence:

>540_bases
ATGAGTATAGAAAAAATTGTTGAACAAGCTCTACAAGATGGTTATTTAACTCCTTCTATGGAAGCAGAAGTAGGACGAAT
TTGTAATACAGCTTCTGAATTGTCTATTGAGGAGTATATGTCCCTTGATCGTTTAATGGGAGCTTTATTAACAGGAGAAG
TAGTTGTTTTACCTCGCAAACAATTTATTAATGTGATGGAAGAGTTAGTTCTATCTGAGGCGATCGCACGAGTAGCAGAG
AATGAAGGGAGTAGCGATCAAACTCTTGATGTGGGAGACATTGCAGCTTATGCTTTAAATAGACTCCCTCCTTTGTATGC
GACTACTGAAGAAGGTGCTCAGTTTCAAAGGTCTAAAGCTAAGGATGAGCTTCAACATTTGATTTCTAAACAGGTAAGTG
AAGCTATCGATCAGAATATTACTCGAAAACCAATTCACTCTAAAGTTTTGAGCAGTTTTTCTAATGATGTGAGCTCACAA
CTAAGTAGCTTGCTCAAATCTATGGCTAACGAATTTGAAGATACAACTCCTAATTCATAA

Upstream 100 bases:

>100_bases
AAACTCATCCCTGACTAAATTTCAGAATTTAGTAATGTCTGCTGAAAAATATTCGACTGCTATATTAGACAGTTATTATA
AATAAACTTACATAAAAGTT

Downstream 100 bases:

>100_bases
AATGCGAGGCGAGAGGTAAGGCAAGAAACAAAAGCCTTCAAAGGATTATTTTTTCAATCTTCTACATTTTCTAATACAAG
GTCAAGCTACAGTTAGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSIEKIVEQALQDGYLTPSMEAEVGRICNTASELSIEEYMSLDRLMGALLTGEVVVLPRKQFINVMEELVLSEAIARVAE
NEGSSDQTLDVGDIAAYALNRLPPLYATTEEGAQFQRSKAKDELQHLISKQVSEAIDQNITRKPIHSKVLSSFSNDVSSQ
LSSLLKSMANEFEDTTPNS

Sequences:

>Translated_179_residues
MSIEKIVEQALQDGYLTPSMEAEVGRICNTASELSIEEYMSLDRLMGALLTGEVVVLPRKQFINVMEELVLSEAIARVAE
NEGSSDQTLDVGDIAAYALNRLPPLYATTEEGAQFQRSKAKDELQHLISKQVSEAIDQNITRKPIHSKVLSSFSNDVSSQ
LSSLLKSMANEFEDTTPNS
>Mature_178_residues
SIEKIVEQALQDGYLTPSMEAEVGRICNTASELSIEEYMSLDRLMGALLTGEVVVLPRKQFINVMEELVLSEAIARVAEN
EGSSDQTLDVGDIAAYALNRLPPLYATTEEGAQFQRSKAKDELQHLISKQVSEAIDQNITRKPIHSKVLSSFSNDVSSQL
SSLLKSMANEFEDTTPNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19710; Mature: 19579

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEKIVEQALQDGYLTPSMEAEVGRICNTASELSIEEYMSLDRLMGALLTGEVVVLPRK
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECHH
QFINVMEELVLSEAIARVAENEGSSDQTLDVGDIAAYALNRLPPLYATTEEGAQFQRSKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KDELQHLISKQVSEAIDQNITRKPIHSKVLSSFSNDVSSQLSSLLKSMANEFEDTTPNS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIEKIVEQALQDGYLTPSMEAEVGRICNTASELSIEEYMSLDRLMGALLTGEVVVLPRK
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECHH
QFINVMEELVLSEAIARVAENEGSSDQTLDVGDIAAYALNRLPPLYATTEEGAQFQRSKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KDELQHLISKQVSEAIDQNITRKPIHSKVLSSFSNDVSSQLSSLLKSMANEFEDTTPNS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA