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The map label for this gene is tsf

Identifier: 113474933

GI number: 113474933

Start: 1820154

End: 1820813

Strand: Reverse

Name: tsf

Synonym: Tery_1160

Alternate gene names: 113474933

Gene position: 1820813-1820154 (Counterclockwise)

Preceding gene: 113474934

Following gene: 113474932

Centisome position: 23.49

GC content: 37.42

Gene sequence:

>660_bases
ATGGCGGAAATATCTGCAAAGTTGGTTAAAGAGTTGCGCGAAAAAACAGGCGCAGGTATGATGGACTGTAAAAAAGCTCT
GAAAGAAACTGATGGCAATATTGATAAAGCTACAGATTGGCTTAGACAAAAAGGTATTGCTTCTGCTGGAAAACTTGAGG
GTAAAGTAGCAACAGAGGGGTTGGTTGAGAGTTATATTCATACAGGTGGTAGGATAGGTGTTTTAGTAGAAGTAAACTGT
CAAACTGATTTTGTTGCCCGGAATGAATCATTTAAAGAATTAGTTAAGAATGTTGCTATGCAAATAGCCGCTTGCCCACA
GGTAGAATATGTGTCAGTTGATGATATTCCAACCGAGTTTGTAGAAAGTGAAAAGTCTATAGAAATGGGTAGAGAAGACC
TGAGTAACAAGCCAGAAAATATTAGGGAAAAGATAGTTCAAGGCCGAATAGGAAAGCGGTTAAAAGAATTAACTTTGATG
GATCAACCTTATATCCGAGACCAAAATAAGACAATAGAAGAGTTGATTAAGGAAACTAGTGCACAATTAGGCGAAAAAGT
ACAAGTACGTCGTTTTATTAGGTTTGTTTTGGGAGAAGGTTTGGAAAAACAAGAAAGTAATTTTGCTGAAGAAGTTGCGG
CACAAACTGGGAAGAAATAA

Upstream 100 bases:

>100_bases
GTAAATTATTTCTAAATATCCTACCTAAAGTCATAAAGCTAAAGTATGATTGTTTCCTAAAATGATATTGTATTAAAACT
AAAATAGGAAAGGAAAAAAG

Downstream 100 bases:

>100_bases
TTAATTTAATAAATTTCATAAAAACAATTAAAAATTAAAAATAGATAATTATGTTTATTTTTAATTTTTAATCGTTGATG
TATAAATATAATTTGGGTAT

Product: translation elongation factor Ts (EF-Ts)

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAEISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEGLVESYIHTGGRIGVLVEVNC
QTDFVARNESFKELVKNVAMQIAACPQVEYVSVDDIPTEFVESEKSIEMGREDLSNKPENIREKIVQGRIGKRLKELTLM
DQPYIRDQNKTIEELIKETSAQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK

Sequences:

>Translated_219_residues
MAEISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEGLVESYIHTGGRIGVLVEVNC
QTDFVARNESFKELVKNVAMQIAACPQVEYVSVDDIPTEFVESEKSIEMGREDLSNKPENIREKIVQGRIGKRLKELTLM
DQPYIRDQNKTIEELIKETSAQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK
>Mature_218_residues
AEISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEGLVESYIHTGGRIGVLVEVNCQ
TDFVARNESFKELVKNVAMQIAACPQVEYVSVDDIPTEFVESEKSIEMGREDLSNKPENIREKIVQGRIGKRLKELTLMD
QPYIRDQNKTIEELIKETSAQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084500, Length=151, Percent_Identity=34.4370860927152, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=43, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=43, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI171846268, Length=100, Percent_Identity=43, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1786366, Length=98, Percent_Identity=52.0408163265306, Blast_Score=104, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17561440, Length=209, Percent_Identity=28.7081339712919, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19921466, Length=109, Percent_Identity=36.697247706422, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_TRIEI (Q116Q3)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_720994.1
- ProteinModelPortal:   Q116Q3
- SMR:   Q116Q3
- STRING:   Q116Q3
- GeneID:   4245743
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_1160
- NMPDR:   fig|203124.1.peg.3479
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- BioCyc:   TERY203124:TERY_1160-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 24492; Mature: 24361

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHH
LVESYIHTGGRIGVLVEVNCQTDFVARNESFKELVKNVAMQIAACPQVEYVSVDDIPTEF
HHHHHHHCCCCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
VESEKSIEMGREDLSNKPENIREKIVQGRIGKRLKELTLMDQPYIRDQNKTIEELIKETS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEISAKLVKELREKTGAGMMDCKKALKETDGNIDKATDWLRQKGIASAGKLEGKVATEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHH
LVESYIHTGGRIGVLVEVNCQTDFVARNESFKELVKNVAMQIAACPQVEYVSVDDIPTEF
HHHHHHHCCCCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
VESEKSIEMGREDLSNKPENIREKIVQGRIGKRLKELTLMDQPYIRDQNKTIEELIKETS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AQLGEKVQVRRFIRFVLGEGLEKQESNFAEEVAAQTGKK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA