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The map label for this gene is ctpA [H]

Identifier: 113474912

GI number: 113474912

Start: 1793933

End: 1795171

Strand: Direct

Name: ctpA [H]

Synonym: Tery_1138

Alternate gene names: 113474912

Gene position: 1793933-1795171 (Clockwise)

Preceding gene: 113474907

Following gene: 113474914

Centisome position: 23.15

GC content: 39.79

Gene sequence:

>1239_bases
ATGAAAAAAAGATTTTTGCAAATTCCACTTCTATTAATACTACCAATTCTTCTGAGTTGGGGACTTTGGATATCTTCTGC
AACAGCATTAACTGAAGAACAGGGCTTATTGGGAGAAGCTTGGCGTATAGTCAATTTGGCTTATGTTGATGATTCTTTCA
ATCATCAAAACTGGTGGTTTGTGCGTCAAAATTTGATGAAGAAACCCCTGACAACTAGAGAAGAAACCTATAGCACTATT
CAAGAAATGTTAGCTAGCCTAGAAGACCCATTCACGCGACTTCTAAAACCACAGCAGTATCGTAATTTACAGGTTGATAC
TTCTGGAGAATTAACAGGAGTGGGTTTACAAATTGCCCTGGACTCTCAAACAGGAGAACTAATAGTTATTTCTCCCTTAG
AAGGTTCTCCTGCTGAAACTGCTGGTATCCAGGCAGGCGATCGCGTCGTCAAGATTGATGGCCATCCAACCACAGAGTTT
TCATTAGACGAAGCTGCAAATAGAATGCGGGGCACTGTTGGCTCTCCTGTGATACTAACAATTTTGAAAGAAAGTAGGGA
CCAACCCCAAGACATAACCATAATTCGGGATCAAATAGAGATTAATCCAGTTTACGCCAAGTTAAAGTCTAACTCTCAAG
CTGGACCTATCGGTTATATTCGTCTGAGTCAATTTAATGCTAACGCTACGGCAGAAATTAGCCAAGTAATAGAGAGTTTT
GAGCAGAAGGGAGCTATTGGCTATATACTTGATTTACGAAATAATCCAGGTGGACTATTACAAGCTGGTGTAGGAATTGC
TCGTCTGTGGTTAGACGACGGTACAATTGTTTACACGGTTAATAGACAAAGAGTTCTTGGTAGTTTTGAGGCTGTTGGTA
TTGCTATAACCAATGCCCCATTAGTTGTATTAACTAATAAGGGAACTGCGAGTGCTAGTGAAATTCTAGCTGGCGCACTC
CAGGATAATGGTCGTGCAATGCTTGTAGGAGAAAAAACTTTTGGCAAGGGTTTAATTCAATCTTTATTTGATCTATCTGA
TGGATCGGGATTAGCAGTTACCGTTGCCAAGTATGAAACGCCAAACCATATAGATATTAATAAGCAGGGGATTATCCCTG
ATGTTGTGATTAAACAAGACCCGATTTTGCCTAACCAAATTACCACAGAAGCTGACAAACAATATCAAGCCGCACTAGAA
CTTATAACATCTCAATTTGTATTAACAAATGCAGCTTAA

Upstream 100 bases:

>100_bases
TTGATATTCTCTATAATTTTTGTTTACCCTAGAAATTTAATCAAACGATTTAACTATATTGGCCAATTATCAAGGATTAA
TCATTCTATACTTTTGTTTC

Downstream 100 bases:

>100_bases
TTGACTCAGGCGGTGGTATACTCTTTCCCTGACCTATACCATAATAAAACTAACTTCCAATTAGCCGTTTCACTTTATTA
AGTTAGGTTAGGGTCATATG

Product: C-terminal processing peptidase-2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKKRFLQIPLLLILPILLSWGLWISSATALTEEQGLLGEAWRIVNLAYVDDSFNHQNWWFVRQNLMKKPLTTREETYSTI
QEMLASLEDPFTRLLKPQQYRNLQVDTSGELTGVGLQIALDSQTGELIVISPLEGSPAETAGIQAGDRVVKIDGHPTTEF
SLDEAANRMRGTVGSPVILTILKESRDQPQDITIIRDQIEINPVYAKLKSNSQAGPIGYIRLSQFNANATAEISQVIESF
EQKGAIGYILDLRNNPGGLLQAGVGIARLWLDDGTIVYTVNRQRVLGSFEAVGIAITNAPLVVLTNKGTASASEILAGAL
QDNGRAMLVGEKTFGKGLIQSLFDLSDGSGLAVTVAKYETPNHIDINKQGIIPDVVIKQDPILPNQITTEADKQYQAALE
LITSQFVLTNAA

Sequences:

>Translated_412_residues
MKKRFLQIPLLLILPILLSWGLWISSATALTEEQGLLGEAWRIVNLAYVDDSFNHQNWWFVRQNLMKKPLTTREETYSTI
QEMLASLEDPFTRLLKPQQYRNLQVDTSGELTGVGLQIALDSQTGELIVISPLEGSPAETAGIQAGDRVVKIDGHPTTEF
SLDEAANRMRGTVGSPVILTILKESRDQPQDITIIRDQIEINPVYAKLKSNSQAGPIGYIRLSQFNANATAEISQVIESF
EQKGAIGYILDLRNNPGGLLQAGVGIARLWLDDGTIVYTVNRQRVLGSFEAVGIAITNAPLVVLTNKGTASASEILAGAL
QDNGRAMLVGEKTFGKGLIQSLFDLSDGSGLAVTVAKYETPNHIDINKQGIIPDVVIKQDPILPNQITTEADKQYQAALE
LITSQFVLTNAA
>Mature_412_residues
MKKRFLQIPLLLILPILLSWGLWISSATALTEEQGLLGEAWRIVNLAYVDDSFNHQNWWFVRQNLMKKPLTTREETYSTI
QEMLASLEDPFTRLLKPQQYRNLQVDTSGELTGVGLQIALDSQTGELIVISPLEGSPAETAGIQAGDRVVKIDGHPTTEF
SLDEAANRMRGTVGSPVILTILKESRDQPQDITIIRDQIEINPVYAKLKSNSQAGPIGYIRLSQFNANATAEISQVIESF
EQKGAIGYILDLRNNPGGLLQAGVGIARLWLDDGTIVYTVNRQRVLGSFEAVGIAITNAPLVVLTNKGTASASEILAGAL
QDNGRAMLVGEKTFGKGLIQSLFDLSDGSGLAVTVAKYETPNHIDINKQGIIPDVVIKQDPILPNQITTEADKQYQAALE
LITSQFVLTNAA

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=329, Percent_Identity=28.2674772036474, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 44990; Mature: 44990

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFLQIPLLLILPILLSWGLWISSATALTEEQGLLGEAWRIVNLAYVDDSFNHQNWWF
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHH
VRQNLMKKPLTTREETYSTIQEMLASLEDPFTRLLKPQQYRNLQVDTSGELTGVGLQIAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCEEECCCCCEEEEEEEEEE
DSQTGELIVISPLEGSPAETAGIQAGDRVVKIDGHPTTEFSLDEAANRMRGTVGSPVILT
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEE
ILKESRDQPQDITIIRDQIEINPVYAKLKSNSQAGPIGYIRLSQFNANATAEISQVIESF
EEHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
EQKGAIGYILDLRNNPGGLLQAGVGIARLWLDDGTIVYTVNRQRVLGSFEAVGIAITNAP
HHCCCEEEEEEECCCCCCHHHHCCCEEEEEECCCEEEEEECHHHHHCCCEEEEEEEECCC
LVVLTNKGTASASEILAGALQDNGRAMLVGEKTFGKGLIQSLFDLSDGSGLAVTVAKYET
EEEEECCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PNHIDINKQGIIPDVVIKQDPILPNQITTEADKQYQAALELITSQFVLTNAA
CCEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MKKRFLQIPLLLILPILLSWGLWISSATALTEEQGLLGEAWRIVNLAYVDDSFNHQNWWF
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHH
VRQNLMKKPLTTREETYSTIQEMLASLEDPFTRLLKPQQYRNLQVDTSGELTGVGLQIAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCEEECCCCCEEEEEEEEEE
DSQTGELIVISPLEGSPAETAGIQAGDRVVKIDGHPTTEFSLDEAANRMRGTVGSPVILT
ECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEE
ILKESRDQPQDITIIRDQIEINPVYAKLKSNSQAGPIGYIRLSQFNANATAEISQVIESF
EEHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
EQKGAIGYILDLRNNPGGLLQAGVGIARLWLDDGTIVYTVNRQRVLGSFEAVGIAITNAP
HHCCCEEEEEEECCCCCCHHHHCCCEEEEEECCCEEEEEECHHHHHCCCEEEEEEEECCC
LVVLTNKGTASASEILAGALQDNGRAMLVGEKTFGKGLIQSLFDLSDGSGLAVTVAKYET
EEEEECCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCC
PNHIDINKQGIIPDVVIKQDPILPNQITTEADKQYQAALELITSQFVLTNAA
CCEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]