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The map label for this gene is clpS [H]

Identifier: 113474895

GI number: 113474895

Start: 1763965

End: 1764252

Strand: Direct

Name: clpS [H]

Synonym: Tery_1121

Alternate gene names: 113474895

Gene position: 1763965-1764252 (Clockwise)

Preceding gene: 113474891

Following gene: 113474896

Centisome position: 22.76

GC content: 39.24

Gene sequence:

>288_bases
GTGTCTATAGAGACTATAGAAAAACCTACCACTTCCACAGTCCGTAAAACTGCACCCCATTATCGTGTTTTACTCCATAA
TGATGATTTTAACAGCATGGAGTATGTGGTGCAAACTTTGATGAAAACAGTACCAAGCTTGACTCAACCCCAAGCTGTTA
ACATAATGATGGAAGCTCACTCAAATGGTATTGCATTGGTAATTATCTGTGCTTTAGAACCTGCAGAGTTCTACTGCGAA
AATTTGAAAAACCATGGACTAACCAGCACCATAGAACCTGATGAGTAA

Upstream 100 bases:

>100_bases
ATCTGATTTTTTATTGATTTTTTTAGTTTAATGTTAAGTTTTATGTTATGTGTATACTATAACGTAATATTTAATTTATT
TAAGTAAGCAGGATAGAATA

Downstream 100 bases:

>100_bases
TTTTGTTCTAATTATAGATACCGGGCTTCTTTAGTTGGAAACTCGGTTTCTCCATCTCTTGTGGTTCTTGGCAATGTCTA
ATTTATTATTACTTCAGAAA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSIETIEKPTTSTVRKTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAHSNGIALVIICALEPAEFYCE
NLKNHGLTSTIEPDE

Sequences:

>Translated_95_residues
MSIETIEKPTTSTVRKTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAHSNGIALVIICALEPAEFYCE
NLKNHGLTSTIEPDE
>Mature_94_residues
SIETIEKPTTSTVRKTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAHSNGIALVIICALEPAEFYCEN
LKNHGLTSTIEPDE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10662; Mature: 10531

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIETIEKPTTSTVRKTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAH
CCCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
SNGIALVIICALEPAEFYCENLKNHGLTSTIEPDE
CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SIETIEKPTTSTVRKTAPHYRVLLHNDDFNSMEYVVQTLMKTVPSLTQPQAVNIMMEAH
CCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
SNGIALVIICALEPAEFYCENLKNHGLTSTIEPDE
CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA