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The map label for this gene is tldD [C]

Identifier: 113474883

GI number: 113474883

Start: 1740339

End: 1741796

Strand: Reverse

Name: tldD [C]

Synonym: Tery_1106

Alternate gene names: 113474883

Gene position: 1741796-1740339 (Counterclockwise)

Preceding gene: 113474884

Following gene: 113474882

Centisome position: 22.47

GC content: 41.43

Gene sequence:

>1458_bases
ATGCCCATATCACTAACTGAAGCCAAAAATCTATTGTCTGACCTACTCAGTGATTATAGCTCTCAAGTAGATTACTTGGC
TATTCGCTTAGAAAAGTCGGAAGAAACAGATATTCTTTTGCGAGGCCACAAAATAGAAACTCTGAGTGAAGGTATTTCTA
TTGGCGGTCAAGTACGAGCCTGCTATAAAGGAGCTTGGGGTTTTGCCAGTTTTAATCAAATATATACTTTGAAAGATAGA
ATAGAAGAGGCGATCGCTGCGGCTAAACTAATTGGGAAAGAAGAAACTATTCTAGCTCCTATACCAATTATTCAAGAAAC
TCATGTGGTTTCTCTCACAGGAAAAAACCCTCGTTACATAAGTTTAGCTAGTAAAAAAGAACTATGCGAACATTATGGCC
AGGTGCTGCGGAGTGTAGATCCTCGAATTACTAATGTGTCTGTGCGTTATGGGGATAGTACCCAAAAAACTATTCTAGCT
ACTTCGGAAGGAACGATATTAGAACAATCTTGGACAGATATGGAAATGCGCTTTGCTGCTACTGCTAGAAATGGGGATAC
TGTACAAACGGGTAGAGAAACTACTGGTTCTCGCAAGGCTTATGAAGATTTAACTAATTTGGATGCACAAGTTCGTAGTG
CTGCTCAGAGAGCTGTTAATTCTCTAGCTTTACCCATAGTTCAAGGTAATGCTTATACTGTAGTTATTGACCCTATTCTG
ACAGGTTTATTTGTTCACGAAGCTTTTGGTCATCTCTCGGAAGCGGATATGGCATACGAAAATCCTGATCTACTGGAAGT
GATGACAATTGGTCGAGTATTTGGTCCGGAAAATTTACAAATATTTGATGGTGCGAAGGTAGAGCCTTTATTAGGTGGGG
CTGGGGAAGAAGTTCATCGGGGTAGTTATGTTTATGATGATGAAGGTACTTTAGCAACTACCACTCAGTTGATTCAGGAT
GGGGTTTTAGTAGGGCGCTTACATTCACGGGAGACTGCTGGAAAGCTGGGGGAGGCACCTACGGGTAATGCACGTTGTCT
TGACTACCGTTATCCACCTATTGTGAGGATGACTAACACTTGGATAGCACAAGGAAATACTCCTGTTTCAGATTTATTTG
CTGATATTAAGGAGGGAGTTTATGCTTGTAACTGGTTTGGTGGCATGACTAATGGGGAAATATTTACTTTTAGTGCTGGA
GAAGCTTGGATGATTAGAAATGGTGAGTTAGCTGAACCGGTTAGGGATGTGACTCTTTCTGGAAATGTGTTTAATACTTT
GGCAGATATTGAAGCGATCGGTGATGATTTTCATTGGGATGAGTCTGGCGGTTGCGGTAAAGGTGAGCAAAATGGTTTAC
CTGTTGGTTGTGGAGGTCCGAGTTTGCGTATTGGGAATGTTGTTGTTGGTGGAGATACTTCTGAGGTCAGAAAGCGGGAA
ATTAGAAGTCAGAAGTGA

Upstream 100 bases:

>100_bases
ATCATCAGAGTAGCTCTAATAGTTAAATAACTACCAAAAAAAACCTTACATTCAAAGTTGATGTTGTACAAATATTAATC
ATAAAACTATTGGAATATAA

Downstream 100 bases:

>100_bases
AGTTCTCAATACTGATAAGTAGGGTTGACACCAATTTTTAAGGTTGTGGTCAACTTAGAAAACTATTTGTATCAGTAAGT
TCAGTTTTCAGAAATTTTAA

Product: peptidase U62, modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MPISLTEAKNLLSDLLSDYSSQVDYLAIRLEKSEETDILLRGHKIETLSEGISIGGQVRACYKGAWGFASFNQIYTLKDR
IEEAIAAAKLIGKEETILAPIPIIQETHVVSLTGKNPRYISLASKKELCEHYGQVLRSVDPRITNVSVRYGDSTQKTILA
TSEGTILEQSWTDMEMRFAATARNGDTVQTGRETTGSRKAYEDLTNLDAQVRSAAQRAVNSLALPIVQGNAYTVVIDPIL
TGLFVHEAFGHLSEADMAYENPDLLEVMTIGRVFGPENLQIFDGAKVEPLLGGAGEEVHRGSYVYDDEGTLATTTQLIQD
GVLVGRLHSRETAGKLGEAPTGNARCLDYRYPPIVRMTNTWIAQGNTPVSDLFADIKEGVYACNWFGGMTNGEIFTFSAG
EAWMIRNGELAEPVRDVTLSGNVFNTLADIEAIGDDFHWDESGGCGKGEQNGLPVGCGGPSLRIGNVVVGGDTSEVRKRE
IRSQK

Sequences:

>Translated_485_residues
MPISLTEAKNLLSDLLSDYSSQVDYLAIRLEKSEETDILLRGHKIETLSEGISIGGQVRACYKGAWGFASFNQIYTLKDR
IEEAIAAAKLIGKEETILAPIPIIQETHVVSLTGKNPRYISLASKKELCEHYGQVLRSVDPRITNVSVRYGDSTQKTILA
TSEGTILEQSWTDMEMRFAATARNGDTVQTGRETTGSRKAYEDLTNLDAQVRSAAQRAVNSLALPIVQGNAYTVVIDPIL
TGLFVHEAFGHLSEADMAYENPDLLEVMTIGRVFGPENLQIFDGAKVEPLLGGAGEEVHRGSYVYDDEGTLATTTQLIQD
GVLVGRLHSRETAGKLGEAPTGNARCLDYRYPPIVRMTNTWIAQGNTPVSDLFADIKEGVYACNWFGGMTNGEIFTFSAG
EAWMIRNGELAEPVRDVTLSGNVFNTLADIEAIGDDFHWDESGGCGKGEQNGLPVGCGGPSLRIGNVVVGGDTSEVRKRE
IRSQK
>Mature_484_residues
PISLTEAKNLLSDLLSDYSSQVDYLAIRLEKSEETDILLRGHKIETLSEGISIGGQVRACYKGAWGFASFNQIYTLKDRI
EEAIAAAKLIGKEETILAPIPIIQETHVVSLTGKNPRYISLASKKELCEHYGQVLRSVDPRITNVSVRYGDSTQKTILAT
SEGTILEQSWTDMEMRFAATARNGDTVQTGRETTGSRKAYEDLTNLDAQVRSAAQRAVNSLALPIVQGNAYTVVIDPILT
GLFVHEAFGHLSEADMAYENPDLLEVMTIGRVFGPENLQIFDGAKVEPLLGGAGEEVHRGSYVYDDEGTLATTTQLIQDG
VLVGRLHSRETAGKLGEAPTGNARCLDYRYPPIVRMTNTWIAQGNTPVSDLFADIKEGVYACNWFGGMTNGEIFTFSAGE
AWMIRNGELAEPVRDVTLSGNVFNTLADIEAIGDDFHWDESGGCGKGEQNGLPVGCGGPSLRIGNVVVGGDTSEVRKREI
RSQK

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=469, Percent_Identity=28.997867803838, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 52789; Mature: 52658

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISLTEAKNLLSDLLSDYSSQVDYLAIRLEKSEETDILLRGHKIETLSEGISIGGQVRA
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCHHHHHHCCCCCCEEEE
CYKGAWGFASFNQIYTLKDRIEEAIAAAKLIGKEETILAPIPIIQETHVVSLTGKNPRYI
ECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEE
SLASKKELCEHYGQVLRSVDPRITNVSVRYGDSTQKTILATSEGTILEQSWTDMEMRFAA
EECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCEEECCCCCCEEEEEE
TARNGDTVQTGRETTGSRKAYEDLTNLDAQVRSAAQRAVNSLALPIVQGNAYTVVIDPIL
ECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEEHHHH
TGLFVHEAFGHLSEADMAYENPDLLEVMTIGRVFGPENLQIFDGAKVEPLLGGAGEEVHR
HHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCHHHC
GSYVYDDEGTLATTTQLIQDGVLVGRLHSRETAGKLGEAPTGNARCLDYRYPPIVRMTNT
CCEEECCCCCCHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCEEEEECCCCEEEEECE
WIAQGNTPVSDLFADIKEGVYACNWFGGMTNGEIFTFSAGEAWMIRNGELAEPVRDVTLS
EEECCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCEEEEECCCHHCCHHCEEEC
GNVFNTLADIEAIGDDFHWDESGGCGKGEQNGLPVGCGGPSLRIGNVVVGGDTSEVRKRE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCEEECCCHHHHHHHH
IRSQK
HHCCC
>Mature Secondary Structure 
PISLTEAKNLLSDLLSDYSSQVDYLAIRLEKSEETDILLRGHKIETLSEGISIGGQVRA
CCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCHHHHHHCCCCCCEEEE
CYKGAWGFASFNQIYTLKDRIEEAIAAAKLIGKEETILAPIPIIQETHVVSLTGKNPRYI
ECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEE
SLASKKELCEHYGQVLRSVDPRITNVSVRYGDSTQKTILATSEGTILEQSWTDMEMRFAA
EECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCEEECCCCCCEEEEEE
TARNGDTVQTGRETTGSRKAYEDLTNLDAQVRSAAQRAVNSLALPIVQGNAYTVVIDPIL
ECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEEHHHH
TGLFVHEAFGHLSEADMAYENPDLLEVMTIGRVFGPENLQIFDGAKVEPLLGGAGEEVHR
HHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCHHHC
GSYVYDDEGTLATTTQLIQDGVLVGRLHSRETAGKLGEAPTGNARCLDYRYPPIVRMTNT
CCEEECCCCCCHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCCCEEEEECCCCEEEEECE
WIAQGNTPVSDLFADIKEGVYACNWFGGMTNGEIFTFSAGEAWMIRNGELAEPVRDVTLS
EEECCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCEEEEECCCHHCCHHCEEEC
GNVFNTLADIEAIGDDFHWDESGGCGKGEQNGLPVGCGGPSLRIGNVVVGGDTSEVRKRE
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCEEECCCHHHHHHHH
IRSQK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]