Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474857

Identifier: 113474857

GI number: 113474857

Start: 1692630

End: 1693406

Strand: Reverse

Name: 113474857

Synonym: Tery_1076

Alternate gene names: NA

Gene position: 1693406-1692630 (Counterclockwise)

Preceding gene: 113474858

Following gene: 113474854

Centisome position: 21.85

GC content: 40.28

Gene sequence:

>777_bases
ATGAAGACTGTTGTAATTACTGGAATTTCTGGCACTTTAGGTAGTGCGATGGGTAAAGCATATAAGTCACGGGGGTGGCA
AGTTGTTGGTGTGACTCGTCAACCTAATTTAGAGGGAAATTTTTTTGATGAGCTATGTATTTCACCCCAAGAAACTATTG
AGGATGCCAAAAAACTCTTTGAGTATGACCCAGATGTGGTGATTTTGAATGCTGGTCAAATTGAGACGGAAGTGGGAGAG
GGTGGCATCCCTGTAGTTGAGTTAGTGGAGTCGATGAATAGGGTTAATTATTCTTGGCCTGCTGTTGTTGGTACTGAAGC
AGCAAAGTTAGCTCGGAGCAGATGTTTAGATGTAATTGCCATTGGCTCAATTGCTGATGGGAGTCCCTCTTGTTTCGGAC
CTGTTTATCATTCTGGTAAAATAGCCCTACATTATTTTTGGTCTGGTGTCGGACCAATTGTTTATCATTCTAGTAAAAAT
ATGATTCGCCTGCGGTTATATCGCCCTGGCGTAATTGCTGGTAAGTTTGCTTGGGCACCTGTAAATCGTTTGAATGATAA
AGCTTATAAGATTCGAGAAAATCGCGTTAATTCTGCTCCACCTGCGGATCAGGTAGCCGAAAAAATAGTTAATTGGATAG
AAAATAGTAAGGAATGGGTGGGAACTTATGATGAGCCTTTTGGCTTTAAGATTTTTAAGTATCTATTCGCTTTGTTTCCC
AACTTTTTCTACAGATTACAGTTATATGGTTGGCCAAAAGGCAGTAAATTTATGTAG

Upstream 100 bases:

>100_bases
AATCCTTAACTGAACCATATTGTATTATGATTGAGTTTCGTTTTGAGACCTAACCTAAACTTATTGAGCTATATATATTA
GTTGTTTATAAAAAAATAAA

Downstream 100 bases:

>100_bases
GAAATAGGGGAGTAAGACAGTAGAGAAGTAGGGAGGTTCTATGCAATTTCCCTACAGGGTTCTCTTTTTTTATGTTCCCA
ACCTGAAAACTACTATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKTVVITGISGTLGSAMGKAYKSRGWQVVGVTRQPNLEGNFFDELCISPQETIEDAKKLFEYDPDVVILNAGQIETEVGE
GGIPVVELVESMNRVNYSWPAVVGTEAAKLARSRCLDVIAIGSIADGSPSCFGPVYHSGKIALHYFWSGVGPIVYHSSKN
MIRLRLYRPGVIAGKFAWAPVNRLNDKAYKIRENRVNSAPPADQVAEKIVNWIENSKEWVGTYDEPFGFKIFKYLFALFP
NFFYRLQLYGWPKGSKFM

Sequences:

>Translated_258_residues
MKTVVITGISGTLGSAMGKAYKSRGWQVVGVTRQPNLEGNFFDELCISPQETIEDAKKLFEYDPDVVILNAGQIETEVGE
GGIPVVELVESMNRVNYSWPAVVGTEAAKLARSRCLDVIAIGSIADGSPSCFGPVYHSGKIALHYFWSGVGPIVYHSSKN
MIRLRLYRPGVIAGKFAWAPVNRLNDKAYKIRENRVNSAPPADQVAEKIVNWIENSKEWVGTYDEPFGFKIFKYLFALFP
NFFYRLQLYGWPKGSKFM
>Mature_258_residues
MKTVVITGISGTLGSAMGKAYKSRGWQVVGVTRQPNLEGNFFDELCISPQETIEDAKKLFEYDPDVVILNAGQIETEVGE
GGIPVVELVESMNRVNYSWPAVVGTEAAKLARSRCLDVIAIGSIADGSPSCFGPVYHSGKIALHYFWSGVGPIVYHSSKN
MIRLRLYRPGVIAGKFAWAPVNRLNDKAYKIRENRVNSAPPADQVAEKIVNWIENSKEWVGTYDEPFGFKIFKYLFALFP
NFFYRLQLYGWPKGSKFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28816; Mature: 28816

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVVITGISGTLGSAMGKAYKSRGWQVVGVTRQPNLEGNFFDELCISPQETIEDAKKLF
CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHH
EYDPDVVILNAGQIETEVGEGGIPVVELVESMNRVNYSWPAVVGTEAAKLARSRCLDVIA
HCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHEEE
IGSIADGSPSCFGPVYHSGKIALHYFWSGVGPIVYHSSKNMIRLRLYRPGVIAGKFAWAP
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCEEECCEEECC
VNRLNDKAYKIRENRVNSAPPADQVAEKIVNWIENSKEWVGTYDEPFGFKIFKYLFALFP
HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHH
NFFYRLQLYGWPKGSKFM
HHEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKTVVITGISGTLGSAMGKAYKSRGWQVVGVTRQPNLEGNFFDELCISPQETIEDAKKLF
CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHH
EYDPDVVILNAGQIETEVGEGGIPVVELVESMNRVNYSWPAVVGTEAAKLARSRCLDVIA
HCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHEEE
IGSIADGSPSCFGPVYHSGKIALHYFWSGVGPIVYHSSKNMIRLRLYRPGVIAGKFAWAP
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCCEEECCEEECC
VNRLNDKAYKIRENRVNSAPPADQVAEKIVNWIENSKEWVGTYDEPFGFKIFKYLFALFP
HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHH
NFFYRLQLYGWPKGSKFM
HHEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA