Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474844

Identifier: 113474844

GI number: 113474844

Start: 1662563

End: 1662811

Strand: Reverse

Name: 113474844

Synonym: Tery_1063

Alternate gene names: NA

Gene position: 1662811-1662563 (Counterclockwise)

Preceding gene: 113474846

Following gene: 113474843

Centisome position: 21.46

GC content: 38.15

Gene sequence:

>249_bases
ATGTGTATTTGTGTGAACTGCCACTATGTGGATCAGTGTGTGACTTATCATGCTGTAGAAACTCAGCACGAACAACTTCA
TTTAACAGAAAATCCAGATTTTGACCCAGTTGAACCTACTATAAATGTTAATATTCGTCCCAAACAAAACGAAATTGAGA
TGGAATGGGATGTTGTCGGTTGTGAAAGTTTTCTAGAAGAAATGGGCAAATGGGCAAAATTAAGACCTGGTGAACTTATC
CCTACCTGA

Upstream 100 bases:

>100_bases
GAAAAGAATAAACTTCAGTGTTTCAAAACCCTGGCTTCATTCAGAAGTACTGATAACTATTAACTGATAACTAAAATGAC
CATCAATGAGGTATTTAAAA

Downstream 100 bases:

>100_bases
ATTCAACCTAAAATGAAATAAGTTAATAAGTATACAGGTATCTTGCCTACCATAACTATACTTCACCTAATAGAAATAGC
TTAATTTTTGCTACCCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI
PT

Sequences:

>Translated_82_residues
MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI
PT
>Mature_82_residues
MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVGCESFLEEMGKWAKLRPGELI
PT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9543; Mature: 9543

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVG
CEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC
CESFLEEMGKWAKLRPGELIPT
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MCICVNCHYVDQCVTYHAVETQHEQLHLTENPDFDPVEPTINVNIRPKQNEIEMEWDVVG
CEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC
CESFLEEMGKWAKLRPGELIPT
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA