| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474838
Identifier: 113474838
GI number: 113474838
Start: 1650953
End: 1651159
Strand: Direct
Name: 113474838
Synonym: Tery_1055
Alternate gene names: NA
Gene position: 1650953-1651159 (Clockwise)
Preceding gene: 113474837
Following gene: 113474839
Centisome position: 21.3
GC content: 36.23
Gene sequence:
>207_bases GTGATTGCCATTATGAACTACTTACAAAAGTGGGTTTTGAGTAATTACCGAACTCAATGGCAGCTTGGAAAACATACATA CAACATTCTCCTGTTAGGAATTGCTGATCACGGTTTGGCAATTATCATAATTTGGGAGATTTTGCCGAAAAAAGGAAATT CCCAAACTACTGAACGAATAGGAGAAATTTGCTTTCCTATTAGGTAA
Upstream 100 bases:
>100_bases GTTAATCGTTTTGGTTCTACCAAAGATAAGTTCTCATTACAAGCACTTACACAGGTTTTTTCCTCATTTTGACATAGATA CCAGAGAATTCGTCTAGACT
Downstream 100 bases:
>100_bases GGGGTGAGTAGCATACTTAACAGTAGGTATAGAATTTCTAGGTAAACAATGATTTAAATATCTTTCGTTTAATTGGGGGT TTCCCATCAGCATTGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MIAIMNYLQKWVLSNYRTQWQLGKHTYNILLLGIADHGLAIIIIWEILPKKGNSQTTERIGEICFPIR
Sequences:
>Translated_68_residues MIAIMNYLQKWVLSNYRTQWQLGKHTYNILLLGIADHGLAIIIIWEILPKKGNSQTTERIGEICFPIR >Mature_68_residues MIAIMNYLQKWVLSNYRTQWQLGKHTYNILLLGIADHGLAIIIIWEILPKKGNSQTTERIGEICFPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7940; Mature: 7940
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIMNYLQKWVLSNYRTQWQLGKHTYNILLLGIADHGLAIIIIWEILPKKGNSQTTERI CHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHH GEICFPIR HHHCCCCC >Mature Secondary Structure MIAIMNYLQKWVLSNYRTQWQLGKHTYNILLLGIADHGLAIIIIWEILPKKGNSQTTERI CHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHH GEICFPIR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA