Click here to switch to the map view.

The map label for this gene is 113474794

Identifier: 113474794

GI number: 113474794

Start: 1568627

End: 1569361

Strand: Direct

Name: 113474794

Synonym: Tery_1004

Alternate gene names: NA

Gene position: 1568627-1569361 (Clockwise)

Preceding gene: 113474793

Following gene: 113474795

Centisome position: 20.24

GC content: 33.74

Gene sequence:

>735_bases
ATGGGTTCTGTTAGACCAAAAATTATCAGAAAGAAACGACAGCCTTCTAAAGTCCGTTTCATACTTTTTAAACGCCTAAT
TTTTATATCGATAGTTATTGTCTCTTTTATATCTTTTTTCCAGGTTTTTAAGGGAAAATTAAATTTAATAAGTAAATCAA
ATACTCCAATAAATAATGATTATAATAAGAAGGAAAAATGGCCTCGACTAGTAATGAAAGGTGGTGACCCTTATATTAGG
GCCTTAATGCGAACTATTTCAGCTAGTGAATCCAATTATTCTGAGCCTTATCATGTTGTTTATACAGGTAAAAAGGTATC
TGACCTCAGCAAACATCCAGACTGGTGTATCACAATTGTTTCAGGTCCAAATAAGGGAAACTGTAGCACGGCAGCAGGAC
GATATCAAATGTTAAGTAATACTTGGTATCTGATGGCAAAACGTTATTATCCTAGACATCATGATTCGTTTATGTTTTGG
AAATCTTATAGTTTTGAGCCCAAATATCAGGATGCTGTTGTGTATGGTTGGTTAAGCGATCGCAAATACTGGAAAGCAGA
TATTCCTGAGTTGTTAAGAAGGGGAGAATTAAATCAAGTTCTGCAATTATTATCTGGTACATGGACAAGTTTAGGATATG
GAATTGAAACTAATTCTATGACGAAGCATTTGCCAACAGTATATAAAAAAGTTTTGGAAGATGAATTAAGTTTGTTGGGA
GGTAGTTTTGATTGA

Upstream 100 bases:

>100_bases
TTTAAGTTAAACTATATTTTTATTAGAGACTTGAAAAAATGTAATTCATTGTCACAAGCTCTCAGAAGAATATTTGTAAA
ATCATCCTTGAAAATTTTAG

Downstream 100 bases:

>100_bases
AAAAAAAGAAGTTTCTGTAGTGGTTGAGTATTTTCCAATAAATACAGTCTTCATGTATGGGAATTGGTGTTATGATAATT
GATTTCAGTTATGGTTGGAA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Phage Lysozyme; Glycoside Hydrolase Family Protein; Family

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGSVRPKIIRKKRQPSKVRFILFKRLIFISIVIVSFISFFQVFKGKLNLISKSNTPINNDYNKKEKWPRLVMKGGDPYIR
ALMRTISASESNYSEPYHVVYTGKKVSDLSKHPDWCITIVSGPNKGNCSTAAGRYQMLSNTWYLMAKRYYPRHHDSFMFW
KSYSFEPKYQDAVVYGWLSDRKYWKADIPELLRRGELNQVLQLLSGTWTSLGYGIETNSMTKHLPTVYKKVLEDELSLLG
GSFD

Sequences:

>Translated_244_residues
MGSVRPKIIRKKRQPSKVRFILFKRLIFISIVIVSFISFFQVFKGKLNLISKSNTPINNDYNKKEKWPRLVMKGGDPYIR
ALMRTISASESNYSEPYHVVYTGKKVSDLSKHPDWCITIVSGPNKGNCSTAAGRYQMLSNTWYLMAKRYYPRHHDSFMFW
KSYSFEPKYQDAVVYGWLSDRKYWKADIPELLRRGELNQVLQLLSGTWTSLGYGIETNSMTKHLPTVYKKVLEDELSLLG
GSFD
>Mature_243_residues
GSVRPKIIRKKRQPSKVRFILFKRLIFISIVIVSFISFFQVFKGKLNLISKSNTPINNDYNKKEKWPRLVMKGGDPYIRA
LMRTISASESNYSEPYHVVYTGKKVSDLSKHPDWCITIVSGPNKGNCSTAAGRYQMLSNTWYLMAKRYYPRHHDSFMFWK
SYSFEPKYQDAVVYGWLSDRKYWKADIPELLRRGELNQVLQLLSGTWTSLGYGIETNSMTKHLPTVYKKVLEDELSLLGG
SFD

Specific function: Unknown

COG id: COG4678

COG function: function code G; Muramidase (phage lambda lysozyme)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28393; Mature: 28262

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVRPKIIRKKRQPSKVRFILFKRLIFISIVIVSFISFFQVFKGKLNLISKSNTPINND
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
YNKKEKWPRLVMKGGDPYIRALMRTISASESNYSEPYHVVYTGKKVSDLSKHPDWCITIV
CCHHHHCCHHEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEE
SGPNKGNCSTAAGRYQMLSNTWYLMAKRYYPRHHDSFMFWKSYSFEPKYQDAVVYGWLSD
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECC
RKYWKADIPELLRRGELNQVLQLLSGTWTSLGYGIETNSMTKHLPTVYKKVLEDELSLLG
CCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GSFD
CCCC
>Mature Secondary Structure 
GSVRPKIIRKKRQPSKVRFILFKRLIFISIVIVSFISFFQVFKGKLNLISKSNTPINND
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
YNKKEKWPRLVMKGGDPYIRALMRTISASESNYSEPYHVVYTGKKVSDLSKHPDWCITIV
CCHHHHCCHHEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEE
SGPNKGNCSTAAGRYQMLSNTWYLMAKRYYPRHHDSFMFWKSYSFEPKYQDAVVYGWLSD
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECC
RKYWKADIPELLRRGELNQVLQLLSGTWTSLGYGIETNSMTKHLPTVYKKVLEDELSLLG
CCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GSFD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA