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The map label for this gene is cpeA [H]

Identifier: 113474786

GI number: 113474786

Start: 1561195

End: 1561689

Strand: Reverse

Name: cpeA [H]

Synonym: Tery_0996

Alternate gene names: 113474786

Gene position: 1561689-1561195 (Counterclockwise)

Preceding gene: 113474787

Following gene: 113474785

Centisome position: 20.15

GC content: 44.04

Gene sequence:

>495_bases
ATGAAATCAGTTATTACCACAGTAATTTCTGCTGCTGATGCGGCAGGTCGTTTCCCTAGCACCTCAGATCTAGAGTCCGT
ACAAGGTTCTATCCAACGTGCAGCAGCTCGTCTAGAAGCTGCTGAAAAACTAGGAGGCAATCTTGATGCAGTTGCTAAAG
AAGCCTATGAAGCTTGTATTAGCAAGTATAGTTACTTGAATAACACTGGTGAAGCTCATTCCACACCAGTTTTTAAGGAA
AAGTGCCTCCGCGATATCAAGCACTATATGCGCCTAATTAACTACTGCTTAGTTGTTGGTGGAACTGGTCCTCTTGATGA
ATGGGGAATTGCTGGTCAACGTGAAGTTTATCGTGCTCTCAGCTTACCTACTGCACCTTATGTTGAAGCTTTGACTTTTG
CCCGTAATCGTGGTTGTGCTCCTCGCGATATGTCCGCTCAAGCATTGACTGAATACACTGCTCTTCTCGACTATGTAATC
AACTCTCTATCCTAA

Upstream 100 bases:

>100_bases
TTGATACAGTTATTGCTGCTATTAATTAAAATCACCTAATTGAAATCTAAGAGCTAACCTTTTGATCCAATCTATTTTTA
TATAGGAGAAAAACTACATT

Downstream 100 bases:

>100_bases
GAAACTAGGAATTTAAGCCAAAGCCACACTTTGGCTTTAAAACTACTTTAATTTTAGAAGTTTGGGACTCTTAGTTAGTT
ATTTACCTAATAGTAGATAA

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSVITTVISAADAAGRFPSTSDLESVQGSIQRAAARLEAAEKLGGNLDAVAKEAYEACISKYSYLNNTGEAHSTPVFKE
KCLRDIKHYMRLINYCLVVGGTGPLDEWGIAGQREVYRALSLPTAPYVEALTFARNRGCAPRDMSAQALTEYTALLDYVI
NSLS

Sequences:

>Translated_164_residues
MKSVITTVISAADAAGRFPSTSDLESVQGSIQRAAARLEAAEKLGGNLDAVAKEAYEACISKYSYLNNTGEAHSTPVFKE
KCLRDIKHYMRLINYCLVVGGTGPLDEWGIAGQREVYRALSLPTAPYVEALTFARNRGCAPRDMSAQALTEYTALLDYVI
NSLS
>Mature_164_residues
MKSVITTVISAADAAGRFPSTSDLESVQGSIQRAAARLEAAEKLGGNLDAVAKEAYEACISKYSYLNNTGEAHSTPVFKE
KCLRDIKHYMRLINYCLVVGGTGPLDEWGIAGQREVYRALSLPTAPYVEALTFARNRGCAPRDMSAQALTEYTALLDYVI
NSLS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 17772; Mature: 17772

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVITTVISAADAAGRFPSTSDLESVQGSIQRAAARLEAAEKLGGNLDAVAKEAYEACI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKYSYLNNTGEAHSTPVFKEKCLRDIKHYMRLINYCLVVGGTGPLDEWGIAGQREVYRAL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHH
SLPTAPYVEALTFARNRGCAPRDMSAQALTEYTALLDYVINSLS
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVITTVISAADAAGRFPSTSDLESVQGSIQRAAARLEAAEKLGGNLDAVAKEAYEACI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKYSYLNNTGEAHSTPVFKEKCLRDIKHYMRLINYCLVVGGTGPLDEWGIAGQREVYRAL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHH
SLPTAPYVEALTFARNRGCAPRDMSAQALTEYTALLDYVINSLS
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2431391; 3092842 [H]