Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474769

Identifier: 113474769

GI number: 113474769

Start: 1538888

End: 1539967

Strand: Direct

Name: 113474769

Synonym: Tery_0976

Alternate gene names: NA

Gene position: 1538888-1539967 (Clockwise)

Preceding gene: 113474768

Following gene: 113474770

Centisome position: 19.86

GC content: 38.52

Gene sequence:

>1080_bases
ATGTTGAATTGGAAAGCAAAAATTCAGGCAGGATTAATTTTAATATTTGTGGGATGGGCAACTCCTGTGTTAAGTAGTCC
TCTTCATATCCTAATTGATGTTCGGGGGAATGTTGAAGTCAAAAAGGCTGAATGGAAGACATTTAATAAGGCTGAGTCTG
GTATGACTCTCAGTAGTGAGGACAAAGTTAAATTAGGTAGTAATGCTTCTTTAATCATTTATTGTAGTGATAAGAATAAA
AGGGTAGTGGAGGGACCAGGAACCTATCTTGTTTCTGAGAAATGTCTTCCAGGAAAGCCTACTATTAAAGTATGTCCAAG
TTGCAATAATGATGATGCACGTCCTGTTGGAGTTAAAGAGGAAGGGTTAAAACAACTACCTTATCTCATTAGTCCCCGTA
AGACTTATGTTTTCAATAACCCCTTAACTATTCGTTGGAATGAAGTTTTTGGAGCAACTCTATACAAGGTTAAGTTTGAG
TTGGGAGGATGGGAAAGGGAAACAAAGAAAACCCAAATTGTTTATGATGGGGAGTTGGAACCGGGAGATTGGAATAGTAT
AATTATAGAGGCGGATAATGGAGCTACTTCTTCAGAAGTGGATGCTCAGAATAGTTGGTTTCAGGTGTTGAAGGATGAGG
AAGCAAAGATTTTACGAGAACAAGTAGCGGCTATTAAGCGGCAGGAATTAAGTCGGGAGCAAGAAGGCTTGGTTTTAGCT
TATTTTTATCGAGGGAATGAGTTAAATTTTGAGGCTATTCAGGTATTGGAAGGCTTGGTAAAGTCTAAGAGTCAGAGAGC
AACGGTTTATCAGTTGTTGGGGGACATTTACCTACAGGTAGGATTGATTTTAATGGCCAAGGATGTTTATCAGCAAGGGT
TGGCGTTGACTATGGAGGAGGAGAATAAAGAAGTTAAGGCAATGATACAATGGGGTTTAGGGGAGATAGAATATCTATTA
GGTAATAAGAATGGGGCTGTAAAGTGGTTGGAAAAGGCTAAGGTAAATTATTTTGCTTTAGGTAAGCAGCTAAATGAGAA
AGAGAAAGAGCTAATAAAGAAAGTTTTCGGTGGAAGTTAA

Upstream 100 bases:

>100_bases
CAGGAGCACATTGATAATTGTTTTCTGGTTGTTAATATTTAAACCTAAAACCTAACACCTAACACCTCAAACCTAACACC
TCAAACCTTATAAAAATTTT

Downstream 100 bases:

>100_bases
TTATGAAAAAAGGTTTGATGAATTTATCTATTTTGTCTGTTGTTACTCTTGTGGGGAGGATGGGTTTTTGAGAATAGAAT
TTTGTGAAATTTGAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLNWKAKIQAGLILIFVGWATPVLSSPLHILIDVRGNVEVKKAEWKTFNKAESGMTLSSEDKVKLGSNASLIIYCSDKNK
RVVEGPGTYLVSEKCLPGKPTIKVCPSCNNDDARPVGVKEEGLKQLPYLISPRKTYVFNNPLTIRWNEVFGATLYKVKFE
LGGWERETKKTQIVYDGELEPGDWNSIIIEADNGATSSEVDAQNSWFQVLKDEEAKILREQVAAIKRQELSREQEGLVLA
YFYRGNELNFEAIQVLEGLVKSKSQRATVYQLLGDIYLQVGLILMAKDVYQQGLALTMEEENKEVKAMIQWGLGEIEYLL
GNKNGAVKWLEKAKVNYFALGKQLNEKEKELIKKVFGGS

Sequences:

>Translated_359_residues
MLNWKAKIQAGLILIFVGWATPVLSSPLHILIDVRGNVEVKKAEWKTFNKAESGMTLSSEDKVKLGSNASLIIYCSDKNK
RVVEGPGTYLVSEKCLPGKPTIKVCPSCNNDDARPVGVKEEGLKQLPYLISPRKTYVFNNPLTIRWNEVFGATLYKVKFE
LGGWERETKKTQIVYDGELEPGDWNSIIIEADNGATSSEVDAQNSWFQVLKDEEAKILREQVAAIKRQELSREQEGLVLA
YFYRGNELNFEAIQVLEGLVKSKSQRATVYQLLGDIYLQVGLILMAKDVYQQGLALTMEEENKEVKAMIQWGLGEIEYLL
GNKNGAVKWLEKAKVNYFALGKQLNEKEKELIKKVFGGS
>Mature_359_residues
MLNWKAKIQAGLILIFVGWATPVLSSPLHILIDVRGNVEVKKAEWKTFNKAESGMTLSSEDKVKLGSNASLIIYCSDKNK
RVVEGPGTYLVSEKCLPGKPTIKVCPSCNNDDARPVGVKEEGLKQLPYLISPRKTYVFNNPLTIRWNEVFGATLYKVKFE
LGGWERETKKTQIVYDGELEPGDWNSIIIEADNGATSSEVDAQNSWFQVLKDEEAKILREQVAAIKRQELSREQEGLVLA
YFYRGNELNFEAIQVLEGLVKSKSQRATVYQLLGDIYLQVGLILMAKDVYQQGLALTMEEENKEVKAMIQWGLGEIEYLL
GNKNGAVKWLEKAKVNYFALGKQLNEKEKELIKKVFGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40403; Mature: 40403

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWKAKIQAGLILIFVGWATPVLSSPLHILIDVRGNVEVKKAEWKTFNKAESGMTLSSE
CCCCCCCCCCCEEEEEECHHHHHHCCCEEEEEEECCCEEEEECCCCCCCHHHCCCEECCC
DKVKLGSNASLIIYCSDKNKRVVEGPGTYLVSEKCLPGKPTIKVCPSCNNDDARPVGVKE
CCEEECCCCEEEEEECCCCCEEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCH
EGLKQLPYLISPRKTYVFNNPLTIRWNEVFGATLYKVKFELGGWERETKKTQIVYDGELE
HHHHHCCEEECCCEEEEECCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCC
PGDWNSIIIEADNGATSSEVDAQNSWFQVLKDEEAKILREQVAAIKRQELSREQEGLVLA
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCEEEE
YFYRGNELNFEAIQVLEGLVKSKSQRATVYQLLGDIYLQVGLILMAKDVYQQGLALTMEE
EEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
ENKEVKAMIQWGLGEIEYLLGNKNGAVKWLEKAKVNYFALGKQLNEKEKELIKKVFGGS
CCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNWKAKIQAGLILIFVGWATPVLSSPLHILIDVRGNVEVKKAEWKTFNKAESGMTLSSE
CCCCCCCCCCCEEEEEECHHHHHHCCCEEEEEEECCCEEEEECCCCCCCHHHCCCEECCC
DKVKLGSNASLIIYCSDKNKRVVEGPGTYLVSEKCLPGKPTIKVCPSCNNDDARPVGVKE
CCEEECCCCEEEEEECCCCCEEEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCH
EGLKQLPYLISPRKTYVFNNPLTIRWNEVFGATLYKVKFELGGWERETKKTQIVYDGELE
HHHHHCCEEECCCEEEEECCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCC
PGDWNSIIIEADNGATSSEVDAQNSWFQVLKDEEAKILREQVAAIKRQELSREQEGLVLA
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHCCEEEE
YFYRGNELNFEAIQVLEGLVKSKSQRATVYQLLGDIYLQVGLILMAKDVYQQGLALTMEE
EEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
ENKEVKAMIQWGLGEIEYLLGNKNGAVKWLEKAKVNYFALGKQLNEKEKELIKKVFGGS
CCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA