| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474707
Identifier: 113474707
GI number: 113474707
Start: 1416502
End: 1418502
Strand: Direct
Name: 113474707
Synonym: Tery_0894
Alternate gene names: NA
Gene position: 1416502-1418502 (Clockwise)
Preceding gene: 113474706
Following gene: 113474714
Centisome position: 18.28
GC content: 34.73
Gene sequence:
>2001_bases ATGACTAATGAACTACCAAAAACTGATTCTCTAAAAAAAAAGGGTCGTATTTTTTCTCAAGATTCATGGGAAAAAATATC TTCTCCGGAAGAGTTTGACGAATTAATACAAGTAGTTACTGTTAAAAACTGGCTGTCTTTTTCTATATTTGGTGGTCTAG TTTTAGTGGGTATTTTATGGAGTATTTTTGGTAAAATACCTATTACAGTAACTGGAAAGGGGGTGTTAATTCGCCCTCGA CAAGTGGTTACATTTCAATCAGCAATTGAAGGTAATTTAGATTCTTTGAAGATTAGAGATGGAGAGTGTGTAAAAAAAGA TGAGGTTCTGGCAACTATTAATCCATCTCAACTGAAAAAACAGTTAGAGTTACAACGACAAAAGCTATTTCTTTTTCAAA CTCAAGCATTAGATACTCAAAGGTTAGAAGGTCAACGGACTCAGTTAGAAGTAGATGGTCTGACAACTAAGGCTGAAGGT TTAAGGCAACGTTTGCGAGATACTCAAAGTCTTACGCCTACTTTACAAAGTAATACTTTAGAGGCTCTCCGGGAAAAGGG TCAGACTTTGGAGCAACGTTTACAGGATATGCAGGCTGTTACTCCGAGATTAAAGGAGGAAAAATTACAGGAAATTAATA AACAACGAGTAAGTTTAGAAAAACGTTTGGGGGATGCTAAAAAATTAACTCCTGAATTGAGGGATAAAAAATTACAGGCG ATCGCTGAACAAAAGATTACTCTGCAGGAAAGGTTACAAAGTGCTAAAAGTTTAACTCCTATTTTGCGGGATAAAAATGA GTTGGCATTGCAACAACAACGAGAAAGTTTAAAGCAACGTTTGAAAGATGCCCAAGAGTTAGTTCCGGTTTTTGAGCAGA GGCTAACAAAGCGCCAGAAGTTATTGGATGATGGTGCTATTTCTCAAGATAATTTATTACAAACAGAACAGGAGTTTAGG CAAAATTTACAGTCTATTGCTCAAATTAAAACTGAGTTAAAACAAGTAGAGGTACAGGAAGCAGAAACTGCAGAAAAATA TTTACAAAATTTCAGTACTATTAATGAAATTGAGGATAAACTGAAGGATTTAGAAGTGGAGGAAGTTGAAACTAATCAGA GATATTTAGATAATGTTAATACTATTAGAGAAATTGAGGGTCAATTACAGGGATTAGATTCACAAACAACTGAAACTTCT AAACAATTTCTGGATAATCTCAATCAAATTAATGAGATAAAGGTGCAGTTACAGGAAGTTAAGTTGCAAGAAACTGAGGC TATGGAAAAGTTTTTGGAAAGTCAGAATATTATGGCTCAATTAAAGGTTGATTTGCTGGATTTAGAAACCCAGAAAAAAC GTTTGGAACAAGAAAATTTAGAGGCGGCAAATACTCGGAAAAATCAAATAGAAGAAGTTAATCGAGAAATTGCTCAGTTA GAAAAACAGGTTGCAGATAATAGTAAAATTCTTAGTCCTGTAGATGGGTGTATTTTGGAAATTAAAGGCACTGTCGGACA ATATGTAAGTCCTGGTACTGTTCTGGGTAAAATTAATGTTCAAGGAAGGTTATCAGGATTAATGGCAGTTAGTTATTTTC CTGTTAAAGATGGTAAAATGATTAAGTCTGATATGAAAATTACTATTACTCCTGATACTGTTAAACGAGAAAGATTTGGA GGAATTATTGGCAATATTACTTCTATTTCTAGTTTTCCTGTGACTAAGGAAGGGGCAAGTTTTGTAGTAGGAAATCCAGA AATAGTAGAAAATATTATTGGGGAAAGTGGGGGGCAAATTGAAACTTATGCTCAACTAAGAAAGGATGATAATACTTTCA GTGATTATCAATGGTCTTCTTCAAAGGGACCACAAAAAAAATTTACTGCGGGTACGACAATAACAGCACGGGTAAGGGTT GAGGAAAGAGCGCCTATTACTTTTGTTTTGCCAATATTAAGGGAGTGGAGCGGGGTTTATTTATTTAAGTCTAAGTCTTA A
Upstream 100 bases:
>100_bases TTTTGGAGGGATTTTATTCAATATTATCCTTTTGTTTTAGTATTATATTTAACATAATAATTTAACATAATAATAAAGTT GATAATTGATTGAAAAAAAA
Downstream 100 bases:
>100_bases TATAAGTCAAAGGTTTTTTAAAAGCTACCTGCCCACCTATTCACCTATTCAAATATTTTTCTAAAGTAAGTTTTTTTTTG GTTATAAAGTGGAATTTTGA
Product: chromosome segregation ATPase-like protein
Products: NA
Alternate protein names: Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Type I Secretion Adaptor Protein; Chromosome Segregation ATPase-Like Protein
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MTNELPKTDSLKKKGRIFSQDSWEKISSPEEFDELIQVVTVKNWLSFSIFGGLVLVGILWSIFGKIPITVTGKGVLIRPR QVVTFQSAIEGNLDSLKIRDGECVKKDEVLATINPSQLKKQLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEG LRQRLRDTQSLTPTLQSNTLEALREKGQTLEQRLQDMQAVTPRLKEEKLQEINKQRVSLEKRLGDAKKLTPELRDKKLQA IAEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQRLKDAQELVPVFEQRLTKRQKLLDDGAISQDNLLQTEQEFR QNLQSIAQIKTELKQVEVQEAETAEKYLQNFSTINEIEDKLKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETS KQFLDNLNQINEIKVQLQEVKLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEVNREIAQL EKQVADNSKILSPVDGCILEIKGTVGQYVSPGTVLGKINVQGRLSGLMAVSYFPVKDGKMIKSDMKITITPDTVKRERFG GIIGNITSISSFPVTKEGASFVVGNPEIVENIIGESGGQIETYAQLRKDDNTFSDYQWSSSKGPQKKFTAGTTITARVRV EERAPITFVLPILREWSGVYLFKSKS
Sequences:
>Translated_666_residues MTNELPKTDSLKKKGRIFSQDSWEKISSPEEFDELIQVVTVKNWLSFSIFGGLVLVGILWSIFGKIPITVTGKGVLIRPR QVVTFQSAIEGNLDSLKIRDGECVKKDEVLATINPSQLKKQLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEG LRQRLRDTQSLTPTLQSNTLEALREKGQTLEQRLQDMQAVTPRLKEEKLQEINKQRVSLEKRLGDAKKLTPELRDKKLQA IAEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQRLKDAQELVPVFEQRLTKRQKLLDDGAISQDNLLQTEQEFR QNLQSIAQIKTELKQVEVQEAETAEKYLQNFSTINEIEDKLKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETS KQFLDNLNQINEIKVQLQEVKLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEVNREIAQL EKQVADNSKILSPVDGCILEIKGTVGQYVSPGTVLGKINVQGRLSGLMAVSYFPVKDGKMIKSDMKITITPDTVKRERFG GIIGNITSISSFPVTKEGASFVVGNPEIVENIIGESGGQIETYAQLRKDDNTFSDYQWSSSKGPQKKFTAGTTITARVRV EERAPITFVLPILREWSGVYLFKSKS >Mature_665_residues TNELPKTDSLKKKGRIFSQDSWEKISSPEEFDELIQVVTVKNWLSFSIFGGLVLVGILWSIFGKIPITVTGKGVLIRPRQ VVTFQSAIEGNLDSLKIRDGECVKKDEVLATINPSQLKKQLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEGL RQRLRDTQSLTPTLQSNTLEALREKGQTLEQRLQDMQAVTPRLKEEKLQEINKQRVSLEKRLGDAKKLTPELRDKKLQAI AEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQRLKDAQELVPVFEQRLTKRQKLLDDGAISQDNLLQTEQEFRQ NLQSIAQIKTELKQVEVQEAETAEKYLQNFSTINEIEDKLKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETSK QFLDNLNQINEIKVQLQEVKLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEVNREIAQLE KQVADNSKILSPVDGCILEIKGTVGQYVSPGTVLGKINVQGRLSGLMAVSYFPVKDGKMIKSDMKITITPDTVKRERFGG IIGNITSISSFPVTKEGASFVVGNPEIVENIIGESGGQIETYAQLRKDDNTFSDYQWSSSKGPQKKFTAGTTITARVRVE ERAPITFVLPILREWSGVYLFKSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75729; Mature: 75597
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNELPKTDSLKKKGRIFSQDSWEKISSPEEFDELIQVVTVKNWLSFSIFGGLVLVGILW CCCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFGKIPITVTGKGVLIRPRQVVTFQSAIEGNLDSLKIRDGECVKKDEVLATINPSQLKK HHHCCCCEEEECCEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHHHHH QLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEGLRQRLRDTQSLTPTLQSNTL HHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHH EALREKGQTLEQRLQDMQAVTPRLKEEKLQEINKQRVSLEKRLGDAKKLTPELRDKKLQA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH IAEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQRLKDAQELVPVFEQRLTKRQK HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDDGAISQDNLLQTEQEFRQNLQSIAQIKTELKQVEVQEAETAEKYLQNFSTINEIEDK HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETSKQFLDNLNQINEIKVQLQEV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEVNREIAQL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH EKQVADNSKILSPVDGCILEIKGTVGQYVSPGTVLGKINVQGRLSGLMAVSYFPVKDGKM HHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECHHHHHEEEEEEEECCCCCE IKSDMKITITPDTVKRERFGGIIGNITSISSFPVTKEGASFVVGNPEIVENIIGESGGQI ECCCCEEEECCCHHHHHHHCCHHHCHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCH ETYAQLRKDDNTFSDYQWSSSKGPQKKFTAGTTITARVRVEERAPITFVLPILREWSGVY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEE LFKSKS EEECCC >Mature Secondary Structure TNELPKTDSLKKKGRIFSQDSWEKISSPEEFDELIQVVTVKNWLSFSIFGGLVLVGILW CCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFGKIPITVTGKGVLIRPRQVVTFQSAIEGNLDSLKIRDGECVKKDEVLATINPSQLKK HHHCCCCEEEECCEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCHHHHHH QLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEGLRQRLRDTQSLTPTLQSNTL HHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHH EALREKGQTLEQRLQDMQAVTPRLKEEKLQEINKQRVSLEKRLGDAKKLTPELRDKKLQA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH IAEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQRLKDAQELVPVFEQRLTKRQK HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDDGAISQDNLLQTEQEFRQNLQSIAQIKTELKQVEVQEAETAEKYLQNFSTINEIEDK HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETSKQFLDNLNQINEIKVQLQEV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEVNREIAQL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH EKQVADNSKILSPVDGCILEIKGTVGQYVSPGTVLGKINVQGRLSGLMAVSYFPVKDGKM HHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECHHHHHEEEEEEEECCCCCE IKSDMKITITPDTVKRERFGGIIGNITSISSFPVTKEGASFVVGNPEIVENIIGESGGQI ECCCCEEEECCCHHHHHHHCCHHHCHHCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCH ETYAQLRKDDNTFSDYQWSSSKGPQKKFTAGTTITARVRVEERAPITFVLPILREWSGVY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEE LFKSKS EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA