| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hyaD [H]
Identifier: 113474697
GI number: 113474697
Start: 1403156
End: 1404088
Strand: Direct
Name: hyaD [H]
Synonym: Tery_0883
Alternate gene names: 113474697
Gene position: 1403156-1404088 (Clockwise)
Preceding gene: 113474695
Following gene: 113474698
Centisome position: 18.1
GC content: 33.33
Gene sequence:
>933_bases ATGTTTTTTAGTATAATTATTCCCACTTATAATCGCCTGGGAATTTTAGAAAAATGCCTCCGTGCCCTAGAAAGTCAAAC TTATGAACAACACATAACCGAATATGAAGTAATAGTTGTCGATGATGGTTCAACAGATGATACTATCCCCTGGCTAAAAG CTAATGCCACAGAATTTCCCCATCTCCAACTTTGGCCTCAGTCTCACCAGGGACCAGCAGCAGCCAGAAATTTAGGAGTT GAAGTAGCTAGGGGAAATTTTATTATTTTTATAGATAGTGACTTAGTAGTAACAGATAATTTTCTTCAGGCCCATGCAAA TACTTTAATTAAATATGGCAAAAAATCAAACTGTATCTTTACTTATGGCAGAGTAATTAATACTTGTAATTTTGATTTTC CCACTTTAGAACCATTAAAATTGACGGATTTTTCAGCAGCTTTTTTTGCTACTGGAAATGTAGCGATCGCTCGTCATTGG TTAATTGAAGCTGGATTATTTGATACTAATTTTAACCAGTATGGTTGGGAAGATTTAGAGTTAGGAATTAGGCTAAAAAA ATTAGGTTTAAAATTAATTAAATGCTCAGAAGCAGTAGGTTATCATTGGCATCCACCCTTTTCTTTGGAGCAATTGCCAA GAATGATTGACAGAGAAATTCAAAGAGGAAAAATGGGAGTTTTATTCTATCAAAAACATCCTATATTGGAAGTAAAAATT ATGATTCAAATGACTTATTTCCACAAGTTATTATGGGGAGTTTTATCACTAGGTGGGAGACTAAATGAGAAAACAATGGC AGTTTTTTTACAATGGTTAATTGACCGAGGTAAATCACAATTGGCTTTAGAAATTTCTCGAATATTTTTGAATTGGTATA ATGTCAAAGCTGTTTATAGTGCTTATGCTAATATTGATGGTTTTAGGAAGTAA
Upstream 100 bases:
>100_bases GTTTTTCCTTTTCTCCAAGAAGAAAAATTATCATGCCCCCATATCTTTCACTAAGGACCCAAGTAGCACTACCCAGGATT GAATATAAATAACTGACTCT
Downstream 100 bases:
>100_bases TACTATTTCTCAATCATTTATGCTATTCTACTGAGAAGTTGTATAATATAATCCCATCTCAATAGCAATTATTTTCTCCT AGCTTATCAAACCCAAACCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-beta-N-acetylglucosaminyltransferase; UDP-GlcNAc transferase; N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase; UDP-GlcUA transferase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MFFSIIIPTYNRLGILEKCLRALESQTYEQHITEYEVIVVDDGSTDDTIPWLKANATEFPHLQLWPQSHQGPAAARNLGV EVARGNFIIFIDSDLVVTDNFLQAHANTLIKYGKKSNCIFTYGRVINTCNFDFPTLEPLKLTDFSAAFFATGNVAIARHW LIEAGLFDTNFNQYGWEDLELGIRLKKLGLKLIKCSEAVGYHWHPPFSLEQLPRMIDREIQRGKMGVLFYQKHPILEVKI MIQMTYFHKLLWGVLSLGGRLNEKTMAVFLQWLIDRGKSQLALEISRIFLNWYNVKAVYSAYANIDGFRK
Sequences:
>Translated_310_residues MFFSIIIPTYNRLGILEKCLRALESQTYEQHITEYEVIVVDDGSTDDTIPWLKANATEFPHLQLWPQSHQGPAAARNLGV EVARGNFIIFIDSDLVVTDNFLQAHANTLIKYGKKSNCIFTYGRVINTCNFDFPTLEPLKLTDFSAAFFATGNVAIARHW LIEAGLFDTNFNQYGWEDLELGIRLKKLGLKLIKCSEAVGYHWHPPFSLEQLPRMIDREIQRGKMGVLFYQKHPILEVKI MIQMTYFHKLLWGVLSLGGRLNEKTMAVFLQWLIDRGKSQLALEISRIFLNWYNVKAVYSAYANIDGFRK >Mature_310_residues MFFSIIIPTYNRLGILEKCLRALESQTYEQHITEYEVIVVDDGSTDDTIPWLKANATEFPHLQLWPQSHQGPAAARNLGV EVARGNFIIFIDSDLVVTDNFLQAHANTLIKYGKKSNCIFTYGRVINTCNFDFPTLEPLKLTDFSAAFFATGNVAIARHW LIEAGLFDTNFNQYGWEDLELGIRLKKLGLKLIKCSEAVGYHWHPPFSLEQLPRMIDREIQRGKMGVLFYQKHPILEVKI MIQMTYFHKLLWGVLSLGGRLNEKTMAVFLQWLIDRGKSQLALEISRIFLNWYNVKAVYSAYANIDGFRK
Specific function: Catalyzes the polymerization of hyaluronan, a polysaccharide composed of a repeating disaccharide of N- acetylglucosamine (GlcNAc) and glucuronic acid (GlcUA) units. Each unit has the composition in beta-(1->4)-GlcUA-beta-(1->3)-GlcNAc [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. CS/HAS subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=92, Percent_Identity=39.1304347826087, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: =2.4.1.212; =2.4.1.226 [H]
Molecular weight: Translated: 35689; Mature: 35689
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSIIIPTYNRLGILEKCLRALESQTYEQHITEYEVIVVDDGSTDDTIPWLKANATEFP CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEECCCCCCC HLQLWPQSHQGPAAARNLGVEVARGNFIIFIDSDLVVTDNFLQAHANTLIKYGKKSNCIF EEEECCCCCCCCHHHHHCCEEEECCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEE TYGRVINTCNFDFPTLEPLKLTDFSAAFFATGNVAIARHWLIEAGLFDTNFNQYGWEDLE EECCCHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCHHH LGIRLKKLGLKLIKCSEAVGYHWHPPFSLEQLPRMIDREIQRGKMGVLFYQKHPILEVKI HCEEEHHHCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEE MIQMTYFHKLLWGVLSLGGRLNEKTMAVFLQWLIDRGKSQLALEISRIFLNWYNVKAVYS EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AYANIDGFRK HHHCCCCCCC >Mature Secondary Structure MFFSIIIPTYNRLGILEKCLRALESQTYEQHITEYEVIVVDDGSTDDTIPWLKANATEFP CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEECCCCCCC HLQLWPQSHQGPAAARNLGVEVARGNFIIFIDSDLVVTDNFLQAHANTLIKYGKKSNCIF EEEECCCCCCCCHHHHHCCEEEECCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEE TYGRVINTCNFDFPTLEPLKLTDFSAAFFATGNVAIARHWLIEAGLFDTNFNQYGWEDLE EECCCHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHCCCCEECCCCCCCCCHHH LGIRLKKLGLKLIKCSEAVGYHWHPPFSLEQLPRMIDREIQRGKMGVLFYQKHPILEVKI HCEEEHHHCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEE MIQMTYFHKLLWGVLSLGGRLNEKTMAVFLQWLIDRGKSQLALEISRIFLNWYNVKAVYS EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AYANIDGFRK HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9770287; 9525958; 10873488 [H]