| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474690
Identifier: 113474690
GI number: 113474690
Start: 1387489
End: 1388583
Strand: Direct
Name: 113474690
Synonym: Tery_0875
Alternate gene names: NA
Gene position: 1387489-1388583 (Clockwise)
Preceding gene: 113474689
Following gene: 113474691
Centisome position: 17.9
GC content: 37.81
Gene sequence:
>1095_bases ATGACCATTACTTATACATTTTTGGGTAAAGGTGGTACAGGTAAAACAACCATTGCATTTGCCACTGCCAAAAGATACGC TAGCCAAGGTAAACGAGTTTTATTTGTGGGACAAGAACCTGCTTCAACATTATCCTTAATATTAGGTGCTAATATTGGCC CAGAACCAACAGAAATAGACTCGAATCTCAAAGCAGTCCATATTCAGGCAGCAAGTTTACTAGAAAGCGGTTGGAAAGAA CTGAAAAAACTAGAAGCTGAATATATTCGTACACCCTTCTTTAAAAAGGTATATGGTCAAGAACTAGGAGTTTTACCAGG AGTAGAAGGAATTCTGACCATTAATGCTATGCAGGAATATAGTGCTAGTGGGAAATATGATTTGATTATTTACGATGGTA CCGGAGATAAAGAGACACTAAGACTTTTGGGTTCGGCAGAAATTATGAGTTGGTATATTCGTCGCTTCCGTCAAGTTATT CTCGACTCAGACCTCTACAAAGCTATTTCTCCATTTGTTCAACCTGTTAGTAATGCTATTTTAAATGTTGACTGGACAGG GAATAATTTTTCTCAACCGACTGAAAAAATCAATGAACTTTTAGATAATGCTAAAGCTACTATAGCTGACCCCAACAGGG TGGCAGCATACTTGGTTACGACAAAGGATAAGGCAGCGATCGCCACAGCCAGATATTTATGGGGAAGTGCCCAACAAGTT AATCTCACTGTGGGGGGAGTAATTCTCAATCAAGCAGATAATGTAGATAATATTACTGCTGAATTTTCACCATTATCTGT AACTCCAGTTCCCCATGGTTCTAATGAAAATTGGCAACTTTTAATGGATGCTCTGCCAGATTTTAGCCAGGCAGTTAAAG CTCCCAAGCCTATTATCATAGATATTCAAAAAAGTCAAGTAAGTTTATTTTTACCTAGTTTTGATAAAAAACAAATTGGA CTTATTCAAGATGGGCCAGAAGTAACTATAGAAGCAGGAGACCAGAGAAGAAATATTTTCCTTCCTCCACCCCTAAGTGG AAGACCTGTTCGTGGTGCAAAGTTCAAAGACGATTATTTGATTATTTCTTTTTAA
Upstream 100 bases:
>100_bases ATCAATACTAAGCTTGTGTAGAATGTTAGAAAAATGATGATATCAACTAAAGTATTGTTTGTGATCAAACGTTTATTAAT CAACTTAACTAATAATTAAA
Downstream 100 bases:
>100_bases AAGGAATGGGAAGTAGAGAAGAGGAAAAAAAGATTGATTTTGAGTTTGGTTAAAAGTTTATAGTAATTGTCAATAGATAA CTACAGAACTAAAACCAAAA
Product: anion-transporting ATPase
Products: NA
Alternate protein names: Arsenical resistance ATPase; Arsenite-translocating ATPase; Arsenite-transporting ATPase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTITYTFLGKGGTGKTTIAFATAKRYASQGKRVLFVGQEPASTLSLILGANIGPEPTEIDSNLKAVHIQAASLLESGWKE LKKLEAEYIRTPFFKKVYGQELGVLPGVEGILTINAMQEYSASGKYDLIIYDGTGDKETLRLLGSAEIMSWYIRRFRQVI LDSDLYKAISPFVQPVSNAILNVDWTGNNFSQPTEKINELLDNAKATIADPNRVAAYLVTTKDKAAIATARYLWGSAQQV NLTVGGVILNQADNVDNITAEFSPLSVTPVPHGSNENWQLLMDALPDFSQAVKAPKPIIIDIQKSQVSLFLPSFDKKQIG LIQDGPEVTIEAGDQRRNIFLPPPLSGRPVRGAKFKDDYLIISF
Sequences:
>Translated_364_residues MTITYTFLGKGGTGKTTIAFATAKRYASQGKRVLFVGQEPASTLSLILGANIGPEPTEIDSNLKAVHIQAASLLESGWKE LKKLEAEYIRTPFFKKVYGQELGVLPGVEGILTINAMQEYSASGKYDLIIYDGTGDKETLRLLGSAEIMSWYIRRFRQVI LDSDLYKAISPFVQPVSNAILNVDWTGNNFSQPTEKINELLDNAKATIADPNRVAAYLVTTKDKAAIATARYLWGSAQQV NLTVGGVILNQADNVDNITAEFSPLSVTPVPHGSNENWQLLMDALPDFSQAVKAPKPIIIDIQKSQVSLFLPSFDKKQIG LIQDGPEVTIEAGDQRRNIFLPPPLSGRPVRGAKFKDDYLIISF >Mature_363_residues TITYTFLGKGGTGKTTIAFATAKRYASQGKRVLFVGQEPASTLSLILGANIGPEPTEIDSNLKAVHIQAASLLESGWKEL KKLEAEYIRTPFFKKVYGQELGVLPGVEGILTINAMQEYSASGKYDLIIYDGTGDKETLRLLGSAEIMSWYIRRFRQVIL DSDLYKAISPFVQPVSNAILNVDWTGNNFSQPTEKINELLDNAKATIADPNRVAAYLVTTKDKAAIATARYLWGSAQQVN LTVGGVILNQADNVDNITAEFSPLSVTPVPHGSNENWQLLMDALPDFSQAVKAPKPIIIDIQKSQVSLFLPSFDKKQIGL IQDGPEVTIEAGDQRRNIFLPPPLSGRPVRGAKFKDDYLIISF
Specific function: Anion-transporting ATPase. Catalyzes the extrusion of arsenite [H]
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arsA ATPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003348 - InterPro: IPR008978 [H]
Pfam domain/function: NA
EC number: =3.6.3.16 [H]
Molecular weight: Translated: 39925; Mature: 39794
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITYTFLGKGGTGKTTIAFATAKRYASQGKRVLFVGQEPASTLSLILGANIGPEPTEID CEEEEEEEECCCCCCEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHEEECCCCCCCCCCC SNLKAVHIQAASLLESGWKELKKLEAEYIRTPFFKKVYGQELGVLPGVEGILTINAMQEY CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHH SASGKYDLIIYDGTGDKETLRLLGSAEIMSWYIRRFRQVILDSDLYKAISPFVQPVSNAI CCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCE LNVDWTGNNFSQPTEKINELLDNAKATIADPNRVAAYLVTTKDKAAIATARYLWGSAQQV EEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEE NLTVGGVILNQADNVDNITAEFSPLSVTPVPHGSNENWQLLMDALPDFSQAVKAPKPIII EEEEEEEEEECCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCCCEEE DIQKSQVSLFLPSFDKKQIGLIQDGPEVTIEAGDQRRNIFLPPPLSGRPVRGAKFKDDYL EEECCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCEECCCEE IISF EEEC >Mature Secondary Structure TITYTFLGKGGTGKTTIAFATAKRYASQGKRVLFVGQEPASTLSLILGANIGPEPTEID EEEEEEEECCCCCCEEEEEHHHHHHHHCCCEEEEECCCCHHHHHHEEECCCCCCCCCCC SNLKAVHIQAASLLESGWKELKKLEAEYIRTPFFKKVYGQELGVLPGVEGILTINAMQEY CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHH SASGKYDLIIYDGTGDKETLRLLGSAEIMSWYIRRFRQVILDSDLYKAISPFVQPVSNAI CCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCE LNVDWTGNNFSQPTEKINELLDNAKATIADPNRVAAYLVTTKDKAAIATARYLWGSAQQV EEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEE NLTVGGVILNQADNVDNITAEFSPLSVTPVPHGSNENWQLLMDALPDFSQAVKAPKPIII EEEEEEEEEECCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCCCEEE DIQKSQVSLFLPSFDKKQIGLIQDGPEVTIEAGDQRRNIFLPPPLSGRPVRGAKFKDDYL EEECCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCEECCCEE IISF EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]