| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is zwf [H]
Identifier: 113474533
GI number: 113474533
Start: 1117041
End: 1118570
Strand: Direct
Name: zwf [H]
Synonym: Tery_0684
Alternate gene names: 113474533
Gene position: 1117041-1118570 (Clockwise)
Preceding gene: 113474532
Following gene: 113474534
Centisome position: 14.41
GC content: 42.48
Gene sequence:
>1530_bases ATGGTAGCAGTATTAGAAAATCCTCTGCGAGTTGGACTACAACAAGACCGGGTTCCAGAACCACAAATTATGATTATTTT TGGTGCATCCGGTGATCTAACCCAGAGAAAACTTGTTCCAGCATTATATCAAATGAAGCTAGAACGGAGACTTCCTCCTG AACTAACAATAGTGGGAGTTGCTCGCAGAGAATGGAGCCATGATTACTTCCGCGAACAAATGAAGATAGGTGTAGAAGAA TTTGGTGGTGGCTTACAATCTGAAGAACTGTGGAATGATTTTGCTAAGGGGATTTTTTACTGCCCTGGTAATATAGATCA ACCAGAAGATTATCAAAGACTCAAAAAACTTTTGAGTCAATTGGACGAAGAGAGAGGTACGCGAGGTAATCGCGTATTTT ACTTGTCTGTAGCTCCCCGATACTTTGGAGAAGCAACCCAACAGTTAGGGGCAGCAGGAATGTTAGTTGATCCTAAAAAG CAAAGATTAGTAATTGAAAAACCCTTTGGTAGAGACCTCAGTTCAGCTCAGGTACTCAATAAAATTGTGCGTCAAGTTTG CCCCGAAGAGCAAATATACCGTATTGACCATTATCTAGGGAAAGAAACTGTTCAAAACTTAATGGTATTTAGATTTGCAA ATGCTATTTTTGAACCTCTGTGGAACCGTCAATTTGTTGATAATGTCCAAATCACTGTTGCAGAAACGGTAGGGTTAGAA GGACGTGCTGGATATTATGAAACATCAGGTGCATTGCGGGACATGGTACAAAACCACCTGATGCAGCTATTCTCCCTGAC AGCAATGGAACCTCCTAATTCTTTAGATGCTGACAGTATTCGCAATGAAAAAGTAAAAGTAGTTCAGGCAACCCGCCTAG CAAATTTAGAGCGTTTAGAATATTCAGCAATTCGTGGTCAGTATACACAGGGTTGGATGAAAGGTAAAAGTGTACCAGCT TATCGGGAAGAGGGAGGAGCAAATCCTAACTCTACAACACCTACGTATGCAGCACTGAAACTCAATATTGATAATTGGCG CTGGAAAGGGGTACCATTTTATTTGCGGACTGGCAAGCGAATGCCAAAAAAAGTCTCAGAAATTGCTATTCAGTTTAAAG AAGTACCGTTTCTGATGTTTCAGTCAGCGGCAAAACAAGCGAATCCTAATGTCTTGGCTTTACGCATCCAGCCTAATGAA GGGGTATCAATGCGTTTTGAAGTCAAAACACCAGGTAGTTCCCTGCGAACTCGCTCAGTAGATATGGATTTTCGTTACGA TACTGCTTTTGGTAAGCCTAGTACAGATGCTTACAGTCGTTTGTTGGTTGACTGTATGTTAGGAGACCAAACCTTATTTA CTCGTGGCGATGAAGTAGAAGCATCTTGGCGAGCATTAACACCAATACTTAGCATCTGGGATGCTCCTGCTCCACCAGAA GTCATACCTTTGTATGAAGCAGGCACCTGGGGGCCAGTTGAGGCTGAACTGTTGCTCAACCAAGATGGTCGTCGTTGGCG CCGACTTTGA
Upstream 100 bases:
>100_bases ATAAAATTCGTTGCTATAAATCAAAAAAAAAGATACTTGGGCAAAAACAAAAGAGCTTCTATAGTAATCAATAGTAATCA ATTAGAAGGAGTCAATATAG
Downstream 100 bases:
>100_bases ATTAATTATCATTGATCCGGTTTTTACAGTAATGTCAAATAGGTTCGCTTATCCAAGGCTAACTACTGAAGTCAAAGTTG AACATTCTGCAAAAAAGACC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MVAVLENPLRVGLQQDRVPEPQIMIIFGASGDLTQRKLVPALYQMKLERRLPPELTIVGVARREWSHDYFREQMKIGVEE FGGGLQSEELWNDFAKGIFYCPGNIDQPEDYQRLKKLLSQLDEERGTRGNRVFYLSVAPRYFGEATQQLGAAGMLVDPKK QRLVIEKPFGRDLSSAQVLNKIVRQVCPEEQIYRIDHYLGKETVQNLMVFRFANAIFEPLWNRQFVDNVQITVAETVGLE GRAGYYETSGALRDMVQNHLMQLFSLTAMEPPNSLDADSIRNEKVKVVQATRLANLERLEYSAIRGQYTQGWMKGKSVPA YREEGGANPNSTTPTYAALKLNIDNWRWKGVPFYLRTGKRMPKKVSEIAIQFKEVPFLMFQSAAKQANPNVLALRIQPNE GVSMRFEVKTPGSSLRTRSVDMDFRYDTAFGKPSTDAYSRLLVDCMLGDQTLFTRGDEVEASWRALTPILSIWDAPAPPE VIPLYEAGTWGPVEAELLLNQDGRRWRRL
Sequences:
>Translated_509_residues MVAVLENPLRVGLQQDRVPEPQIMIIFGASGDLTQRKLVPALYQMKLERRLPPELTIVGVARREWSHDYFREQMKIGVEE FGGGLQSEELWNDFAKGIFYCPGNIDQPEDYQRLKKLLSQLDEERGTRGNRVFYLSVAPRYFGEATQQLGAAGMLVDPKK QRLVIEKPFGRDLSSAQVLNKIVRQVCPEEQIYRIDHYLGKETVQNLMVFRFANAIFEPLWNRQFVDNVQITVAETVGLE GRAGYYETSGALRDMVQNHLMQLFSLTAMEPPNSLDADSIRNEKVKVVQATRLANLERLEYSAIRGQYTQGWMKGKSVPA YREEGGANPNSTTPTYAALKLNIDNWRWKGVPFYLRTGKRMPKKVSEIAIQFKEVPFLMFQSAAKQANPNVLALRIQPNE GVSMRFEVKTPGSSLRTRSVDMDFRYDTAFGKPSTDAYSRLLVDCMLGDQTLFTRGDEVEASWRALTPILSIWDAPAPPE VIPLYEAGTWGPVEAELLLNQDGRRWRRL >Mature_509_residues MVAVLENPLRVGLQQDRVPEPQIMIIFGASGDLTQRKLVPALYQMKLERRLPPELTIVGVARREWSHDYFREQMKIGVEE FGGGLQSEELWNDFAKGIFYCPGNIDQPEDYQRLKKLLSQLDEERGTRGNRVFYLSVAPRYFGEATQQLGAAGMLVDPKK QRLVIEKPFGRDLSSAQVLNKIVRQVCPEEQIYRIDHYLGKETVQNLMVFRFANAIFEPLWNRQFVDNVQITVAETVGLE GRAGYYETSGALRDMVQNHLMQLFSLTAMEPPNSLDADSIRNEKVKVVQATRLANLERLEYSAIRGQYTQGWMKGKSVPA YREEGGANPNSTTPTYAALKLNIDNWRWKGVPFYLRTGKRMPKKVSEIAIQFKEVPFLMFQSAAKQANPNVLALRIQPNE GVSMRFEVKTPGSSLRTRSVDMDFRYDTAFGKPSTDAYSRLLVDCMLGDQTLFTRGDEVEASWRALTPILSIWDAPAPPE VIPLYEAGTWGPVEAELLLNQDGRRWRRL
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=495, Percent_Identity=37.1717171717172, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI109389365, Length=495, Percent_Identity=37.1717171717172, Blast_Score=311, Evalue=9e-85, Organism=Homo sapiens, GI52145310, Length=493, Percent_Identity=31.8458417849899, Blast_Score=189, Evalue=4e-48, Organism=Escherichia coli, GI1788158, Length=490, Percent_Identity=41.8367346938776, Blast_Score=404, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538218, Length=511, Percent_Identity=38.5518590998043, Blast_Score=343, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6324088, Length=474, Percent_Identity=35.8649789029536, Blast_Score=290, Evalue=4e-79, Organism=Drosophila melanogaster, GI24643350, Length=487, Percent_Identity=37.3716632443532, Blast_Score=302, Evalue=3e-82, Organism=Drosophila melanogaster, GI24643352, Length=487, Percent_Identity=37.3716632443532, Blast_Score=302, Evalue=4e-82, Organism=Drosophila melanogaster, GI221513548, Length=482, Percent_Identity=31.1203319502075, Blast_Score=220, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 58024; Mature: 58024
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVLENPLRVGLQQDRVPEPQIMIIFGASGDLTQRKLVPALYQMKLERRLPPELTIVGV CCEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE ARREWSHDYFREQMKIGVEEFGGGLQSEELWNDFAKGIFYCPGNIDQPEDYQRLKKLLSQ HHHHCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHH LDEERGTRGNRVFYLSVAPRYFGEATQQLGAAGMLVDPKKQRLVIEKPFGRDLSSAQVLN HHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHH KIVRQVCPEEQIYRIDHYLGKETVQNLMVFRFANAIFEPLWNRQFVDNVQITVAETVGLE HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCC GRAGYYETSGALRDMVQNHLMQLFSLTAMEPPNSLDADSIRNEKVKVVQATRLANLERLE CCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHH YSAIRGQYTQGWMKGKSVPAYREEGGANPNSTTPTYAALKLNIDNWRWKGVPFYLRTGKR HHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCEEEECCCC MPKKVSEIAIQFKEVPFLMFQSAAKQANPNVLALRIQPNEGVSMRFEVKTPGSSLRTRSV CHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEE DMDFRYDTAFGKPSTDAYSRLLVDCMLGDQTLFTRGDEVEASWRALTPILSIWDAPAPPE CCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCC VIPLYEAGTWGPVEAELLLNQDGRRWRRL EEEEEECCCCCCCEEEEEECCCCHHHHCC >Mature Secondary Structure MVAVLENPLRVGLQQDRVPEPQIMIIFGASGDLTQRKLVPALYQMKLERRLPPELTIVGV CCEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE ARREWSHDYFREQMKIGVEEFGGGLQSEELWNDFAKGIFYCPGNIDQPEDYQRLKKLLSQ HHHHCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHH LDEERGTRGNRVFYLSVAPRYFGEATQQLGAAGMLVDPKKQRLVIEKPFGRDLSSAQVLN HHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCHHHHHHH KIVRQVCPEEQIYRIDHYLGKETVQNLMVFRFANAIFEPLWNRQFVDNVQITVAETVGLE HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCC GRAGYYETSGALRDMVQNHLMQLFSLTAMEPPNSLDADSIRNEKVKVVQATRLANLERLE CCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHH YSAIRGQYTQGWMKGKSVPAYREEGGANPNSTTPTYAALKLNIDNWRWKGVPFYLRTGKR HHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCEEEECCCC MPKKVSEIAIQFKEVPFLMFQSAAKQANPNVLALRIQPNEGVSMRFEVKTPGSSLRTRSV CHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEE DMDFRYDTAFGKPSTDAYSRLLVDCMLGDQTLFTRGDEVEASWRALTPILSIWDAPAPPE CCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCC VIPLYEAGTWGPVEAELLLNQDGRRWRRL EEEEEECCCCCCCEEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1643289 [H]