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The map label for this gene is patA [H]

Identifier: 113474464

GI number: 113474464

Start: 984446

End: 985642

Strand: Direct

Name: patA [H]

Synonym: Tery_0608

Alternate gene names: 113474464

Gene position: 984446-985642 (Clockwise)

Preceding gene: 113474462

Following gene: 113474466

Centisome position: 12.7

GC content: 30.58

Gene sequence:

>1197_bases
ATGACCAGTTATGAAAATAGCAACAATAAACTTTTTGATGTGTTTCTCAATGACATACCCGATAAATTTACAGGAAAGTT
AGAAGTAAAAAGTTCTCGCCAAAGTTGGACAATATTTTTGTGTATCGGTCATCTAGCTTGGGCAATAGGTGGCAAACATT
ATAATCGGAGATTTTACAAAATATGGCATCAATTTTGTTCAAATGTTCCTCTAGAAAAGATTAAATTAGGAAAACAAGAT
ACTCTTTTCTGTGATTACTATCATATCATGTCTGTTTTATCGAGGCGAAAAATATTAACTATCCCTCAAATAAAAGCAGT
AGTATTGGGAAACTTAGAAGAAGTTTTATTTGATATTTTACAGGAGGAATCACAAGAAAAATTAACATACGATGTATCCA
ATTCTGGATTCGACAAAACTTCGACCATAATTTCTTCAATTGTTAGATTAGAAACTGTTATTTCTCGAGTTAATAAGTTG
TGGAAAAATTGGCAAAATTCTAATTTAGCTGCATATTCTCCTAACTTAATTCCTACAATTATCAACTATGAAAAGTTACA
AAAAATAGCCAAAAATAACACTTATAAGACAATTACTAAGTTAGTTGATGGCAAAAAATCACTGCGAGAAACTGCTGTCT
TGTTCAAAAAAGATGTGCGGGAGCTAACTTTGTTTTTAATTCCTTATGTTAAGAATAAATTAATTCACTTCAAAGAAGGA
GCAGACAAAAAAAATCTAGAGAGAAGTACTCAAGATGTGCATAAAAAAACAATACCCAAGCAATCTCAAGCATTAATTAT
TTGTGTAGATGATAGTAAAGAAACTTGTTATATCTTAGAGAAAATAATTAAAAAAACGGGTTATAAATTTATGGGAATTC
AAGATTCTATTAAAGCATTATTTATGATTATTGAATCTAAACCGGATCTAATTTTCTTAGATTTAATGATGCCAATTGCC
AATGGTTATGAAATTTGTACTCAACTGCGAAGAGTGCCTATGTTTGAGAATACACCAATAATTATATTAACTGGGAGTGA
TGGAGTTGTAGACCGAGTTCGAGCGAAAATGGTAGGGGCTACAGGGTATTTGACTAAACCTATTGAACCGAAAAAAGTTT
TAGCTTTAGTCAAGAATTATTTACAAAATCCTCGCTCTCCTGATACTCAAATTAAATCTGATGAATCAGATTTATAA

Upstream 100 bases:

>100_bases
TGCAAAAATCACCACAAATATACACTATAAATATATTTGTATATTTTTTAATTTTTTTTCTCTCCAATTTCTAACAATAT
ATACAATCATTATCAAGAAA

Downstream 100 bases:

>100_bases
TTTAATACAATTCAACTAATAATTTTTTTAGTAATTGCTGAAAAATTAAAAAGCTTATCTAATATTTCCAAATTATAATA
AAGTAATTCTGCAGAAATAG

Product: response regulator receiver protein

Products: NA

Alternate protein names: PAT-1 [H]

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTSYENSNNKLFDVFLNDIPDKFTGKLEVKSSRQSWTIFLCIGHLAWAIGGKHYNRRFYKIWHQFCSNVPLEKIKLGKQD
TLFCDYYHIMSVLSRRKILTIPQIKAVVLGNLEEVLFDILQEESQEKLTYDVSNSGFDKTSTIISSIVRLETVISRVNKL
WKNWQNSNLAAYSPNLIPTIINYEKLQKIAKNNTYKTITKLVDGKKSLRETAVLFKKDVRELTLFLIPYVKNKLIHFKEG
ADKKNLERSTQDVHKKTIPKQSQALIICVDDSKETCYILEKIIKKTGYKFMGIQDSIKALFMIIESKPDLIFLDLMMPIA
NGYEICTQLRRVPMFENTPIIILTGSDGVVDRVRAKMVGATGYLTKPIEPKKVLALVKNYLQNPRSPDTQIKSDESDL

Sequences:

>Translated_398_residues
MTSYENSNNKLFDVFLNDIPDKFTGKLEVKSSRQSWTIFLCIGHLAWAIGGKHYNRRFYKIWHQFCSNVPLEKIKLGKQD
TLFCDYYHIMSVLSRRKILTIPQIKAVVLGNLEEVLFDILQEESQEKLTYDVSNSGFDKTSTIISSIVRLETVISRVNKL
WKNWQNSNLAAYSPNLIPTIINYEKLQKIAKNNTYKTITKLVDGKKSLRETAVLFKKDVRELTLFLIPYVKNKLIHFKEG
ADKKNLERSTQDVHKKTIPKQSQALIICVDDSKETCYILEKIIKKTGYKFMGIQDSIKALFMIIESKPDLIFLDLMMPIA
NGYEICTQLRRVPMFENTPIIILTGSDGVVDRVRAKMVGATGYLTKPIEPKKVLALVKNYLQNPRSPDTQIKSDESDL
>Mature_397_residues
TSYENSNNKLFDVFLNDIPDKFTGKLEVKSSRQSWTIFLCIGHLAWAIGGKHYNRRFYKIWHQFCSNVPLEKIKLGKQDT
LFCDYYHIMSVLSRRKILTIPQIKAVVLGNLEEVLFDILQEESQEKLTYDVSNSGFDKTSTIISSIVRLETVISRVNKLW
KNWQNSNLAAYSPNLIPTIINYEKLQKIAKNNTYKTITKLVDGKKSLRETAVLFKKDVRELTLFLIPYVKNKLIHFKEGA
DKKNLERSTQDVHKKTIPKQSQALIICVDDSKETCYILEKIIKKTGYKFMGIQDSIKALFMIIESKPDLIFLDLMMPIAN
GYEICTQLRRVPMFENTPIIILTGSDGVVDRVRAKMVGATGYLTKPIEPKKVLALVKNYLQNPRSPDTQIKSDESDL

Specific function: Controls heterocyst pattern formation. Required for the differentiation of intercalary heterocysts but not for terminal heterocysts [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=31.9672131147541, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=31.3559322033898, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082012, Length=118, Percent_Identity=32.2033898305085, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45818; Mature: 45687

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSYENSNNKLFDVFLNDIPDKFTGKLEVKSSRQSWTIFLCIGHLAWAIGGKHYNRRFYK
CCCCCCCCCCEEEEEHHHCCHHHCCCEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHH
IWHQFCSNVPLEKIKLGKQDTLFCDYYHIMSVLSRRKILTIPQIKAVVLGNLEEVLFDIL
HHHHHHCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCEEECCCHHHHHHCCHHHHHHHHH
QEESQEKLTYDVSNSGFDKTSTIISSIVRLETVISRVNKLWKNWQNSNLAAYSPNLIPTI
HHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH
INYEKLQKIAKNNTYKTITKLVDGKKSLRETAVLFKKDVRELTLFLIPYVKNKLIHFKEG
CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
ADKKNLERSTQDVHKKTIPKQSQALIICVDDSKETCYILEKIIKKTGYKFMGIQDSIKAL
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECHHHHHHHH
FMIIESKPDLIFLDLMMPIANGYEICTQLRRVPMFENTPIIILTGSDGVVDRVRAKMVGA
HHHHCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCC
TGYLTKPIEPKKVLALVKNYLQNPRSPDTQIKSDESDL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSYENSNNKLFDVFLNDIPDKFTGKLEVKSSRQSWTIFLCIGHLAWAIGGKHYNRRFYK
CCCCCCCCCEEEEEHHHCCHHHCCCEEEECCCCCEEEEEEHHHHHHHHCCHHHHHHHHH
IWHQFCSNVPLEKIKLGKQDTLFCDYYHIMSVLSRRKILTIPQIKAVVLGNLEEVLFDIL
HHHHHHCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCEEECCCHHHHHHCCHHHHHHHHH
QEESQEKLTYDVSNSGFDKTSTIISSIVRLETVISRVNKLWKNWQNSNLAAYSPNLIPTI
HHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH
INYEKLQKIAKNNTYKTITKLVDGKKSLRETAVLFKKDVRELTLFLIPYVKNKLIHFKEG
CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
ADKKNLERSTQDVHKKTIPKQSQALIICVDDSKETCYILEKIIKKTGYKFMGIQDSIKAL
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEECHHHHHHHH
FMIIESKPDLIFLDLMMPIANGYEICTQLRRVPMFENTPIIILTGSDGVVDRVRAKMVGA
HHHHCCCCCEEEEEHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCC
TGYLTKPIEPKKVLALVKNYLQNPRSPDTQIKSDESDL
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1608976; 11237320; 11759840 [H]