Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474456

Identifier: 113474456

GI number: 113474456

Start: 966890

End: 968791

Strand: Direct

Name: 113474456

Synonym: Tery_0600

Alternate gene names: NA

Gene position: 966890-968791 (Clockwise)

Preceding gene: 113474455

Following gene: 113474457

Centisome position: 12.48

GC content: 41.32

Gene sequence:

>1902_bases
ATGAATTACGAAACAGAAAATTACGATCAAGATCAAGGTAGTCAAAACTATCAATATCAAAGTAGTGAAAACTATCAAGA
TCAAGGCAGTGACAACTATCAAACAAAGACAGTCAAAGAAAATCCAGTTGCCAAAAATGTGGCTAAAAAGGGTAGGCTTC
GTGGTTTAACACAAGCCGATGTGGACAGAAAAGCTGGAAAGGCTAAACGCCGTAAAGATATGTCAAAAAAAATTGGTGGT
TATGAAGAAAAGGATGCTGAAAGGCGAGGTGAGTTGAAAAAGGATTATGAAAACAATACAGATCAGATAAAGAAAAACGA
AGCTGAACGTCAACAAATTGCTGAGGAAGACGCAATCAAACGTCAGGCTGACACGGAAAATAGGCGCAACAAAGTAGCAG
CAGATCTGAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAGCACGCGTCAAGCTGAATATGCTGCA
CTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCA
CGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAG
CTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGAC
ACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGA
CAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGTTTTCCAAGCAGAGATTCTTC
AAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAAT
TCTGCTGAATGGGACAGCACGCGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGCTTTCCA
AGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGG
TACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAA
ATTGCTGTTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTAGTAGCAGATATCAA
GGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGCTGCACTAGTTCAAG
CTGTAGCTGACAAAATTGCTGCTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATAGGCACGACAAAGTA
GTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAAGACACGTCAAGCTGAATATGC
TGCACTAGTTCAAACTGTAGCTGACAAAATTGCTGCTTTCCAAGCAGAGATTCTTCAAACTAAAGCTGACACGAAAGATA
GGCACGACAAAGTAGTAGCAGATATCAAGGAAACCAACGAGGTACGTCTAGAAAATTCTGCTGAATGGGACAGCACGCGT
CAAGCTGAATATGCTGCACTAGTTCAAGCTGTAGCTGACAAAATTGCTGGCTTCAAAGCAGAGATTCTTGAAAGCTTGAA
TACAGCTATAGAAAAGGCAACGCAAGAGGAAACTCAACGTAAACAAATTGCAGAAGAAGACAAGCAGGAAAGGGTTGATG
CAAATAGTAAACGCCGTAAAGATAGGAATGATCAATTTGTAGATTTCATAGAAGTCTCTTAG

Upstream 100 bases:

>100_bases
ACCCATTAAAACATTTTCTTAAAATTATTTAATGATCATTATTTACTTTTTATAGTATAAGATTATAGTATAAGGTTCTA
AATCAAAATCATGACAAGCT

Downstream 100 bases:

>100_bases
AAGGTTTAGGCCATTCTCTGGGATTTATCGTTAGATGAATAAGTAGTTAATTAAGTAGGTTTGATGCCTACTTAATTAAC
ATAGATAATCTGGATTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG
YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA
LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD
TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN
SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK
IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV
VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR
QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS

Sequences:

>Translated_633_residues
MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG
YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA
LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD
TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN
SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK
IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV
VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR
QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS
>Mature_633_residues
MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQADVDRKAGKAKRRKDMSKKIGG
YEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIKRQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAA
LVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD
TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHDKVVADIKETNEVRLEN
SAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADK
IAVFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV
VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVADIKETNEVRLENSAEWDSTR
QAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQRKQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71991; Mature: 71991

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
VDRKAGKAKRRKDMSKKIGGYEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAVFQAEILQTK
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD
CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTK
CCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DRHDKVVADIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDR
HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHD
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV
HHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVA
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQR
HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS
HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure
MNYETENYDQDQGSQNYQYQSSENYQDQGSDNYQTKTVKENPVAKNVAKKGRLRGLTQAD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
VDRKAGKAKRRKDMSKKIGGYEEKDAERRGELKKDYENNTDQIKKNEAERQQIAEEDAIK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RQADTENRRNKVAADLKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAVFQAEILQTK
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADTKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKAD
CCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKDRHDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTK
CCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DRHDKVVADIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAAFQAEILQTKADTKDR
HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HDKVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAVFQAEILQTKADTKDRHD
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KVVADIKETNEVRLENSAEWDKTRQAEYAALVQAVADKIAAFQAEILQTKADTKDRHDKV
HHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VADIKETNEVRLENSAEWDKTRQAEYAALVQTVADKIAAFQAEILQTKADTKDRHDKVVA
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIKETNEVRLENSAEWDSTRQAEYAALVQAVADKIAGFKAEILESLNTAIEKATQEETQR
HHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KQIAEEDKQERVDANSKRRKDRNDQFVDFIEVS
HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA