Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is ydjG [C]

Identifier: 113474328

GI number: 113474328

Start: 725804

End: 726748

Strand: Reverse

Name: ydjG [C]

Synonym: Tery_0458

Alternate gene names: 113474328

Gene position: 726748-725804 (Counterclockwise)

Preceding gene: 113474330

Following gene: 113474323

Centisome position: 9.38

GC content: 35.66

Gene sequence:

>945_bases
ATGGCAACAACTACTCTAGGTACAACAGGAATAACTGTTAACCCAATTTGTATCGGCACTTGGGCTTGGGGGGATAAACT
TTTTTGGAATTATGGCAGTAATTATGGAGCAAATGAAGTAGAAGCCGCTTTTAAAACCTCCCTAGAAGCTGGGGTAAATT
TCTTTGATACTGCCGAAGTTTATGGCAATGGTTTATCAGAAGAATTGCTGGGAAAATTTATGCAAGAAACTGAAAGACCT
GTGCAAATTGCTACTAAATATGGTCCTCTACCTTGGCGACTTTTTCCAGACTCAGTTGCTGATGCTGTGACTGCTAGTCT
AAAACGATTAATAGTTCCCAAAGTTACTCTTTATCAAGTACATTGGCCTTTTACATTTTTGATGAGTCAGGAAACATTAT
TAAATGCTTTAGCAGATGAAGTTAAGCAGGGTAGAATTGAAGCGGTTGGTGTTAGTAATTATTCTGAGGAAGAGATGAGT
CAAGCTCATAAAATTTTGGAAAAACGAGGGGTAATATTAGCCACAAATCAAGTGAAATATTCTTTGCTTTCCCGTAAAAT
AGAAACTAAAGGAATTTTAAATACAGCCAAAAAATTAGGAATTACAATTTTAGCTTATAGTCCTTTAGCTCAAGGGTTAT
TAACTGGAAAATACACTTTAGAAAAGTCACCTACTGGGGCTCGCCAATTTGATTTTCGTTTTCAAAAGAGTGGTTTAGAA
AAAATTGCTCCCGTTATGTCTTTGTTAAACCAAATTGGGGAAAAATATAACAAAACTCCGGCACAAGTTGCACTTAATTG
GTTAGTTTTTCAAGATAGTGTAATTCCTATTGCTGGCTGTAAAAATTCTGAGCAAGTTCGACAAAATATTGGAGCAATAG
GTTGGGAAATGACTCAAGAAGAATTTAATCAATTAGAACAAATTACTCGCCCTTGGTTAAATTGA

Upstream 100 bases:

>100_bases
ATATTAAGAGAACTGAATTAACATCTATTTAGATGGAAATATAACCGACAATTCATCGTCAATTTCCAGACATTATACAG
TAATTAGGAAAACTTTTACC

Downstream 100 bases:

>100_bases
AAATGAAAGTATTAACTTAATCAAAAAAATAGGGAAGGGTTTGGTGTATTAAGGGGAGTTGATGAGGAAGTGACAAATTA
ATAGTTTGTTCATTTTTGTA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERP
VQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMS
QAHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE
KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN

Sequences:

>Translated_314_residues
MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERP
VQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMS
QAHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE
KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN
>Mature_313_residues
ATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEVYGNGLSEELLGKFMQETERPV
QIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQVHWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQ
AHKILEKRGVILATNQVKYSLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLEK
IAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQEEFNQLEQITRPWLN

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI223718702, Length=288, Percent_Identity=32.6388888888889, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI41327764, Length=270, Percent_Identity=32.962962962963, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI27436962, Length=339, Percent_Identity=26.2536873156342, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI41152114, Length=286, Percent_Identity=31.1188811188811, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI27436966, Length=339, Percent_Identity=25.9587020648968, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27436964, Length=339, Percent_Identity=25.9587020648968, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27436969, Length=311, Percent_Identity=25.4019292604502, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4504825, Length=306, Percent_Identity=25.4901960784314, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1788070, Length=335, Percent_Identity=30.7462686567164, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=28.75, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=27.5757575757576, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788081, Length=280, Percent_Identity=29.2857142857143, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789199, Length=339, Percent_Identity=28.023598820059, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082198, Length=275, Percent_Identity=22.9090909090909, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786400, Length=238, Percent_Identity=28.9915966386555, Blast_Score=64, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17564128, Length=327, Percent_Identity=25.3822629969419, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17566692, Length=323, Percent_Identity=24.4582043343653, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17550248, Length=321, Percent_Identity=26.791277258567, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6325384, Length=287, Percent_Identity=27.1777003484321, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320079, Length=290, Percent_Identity=24.8275862068966, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24644950, Length=325, Percent_Identity=27.3846153846154, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24657054, Length=298, Percent_Identity=23.489932885906, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24646159, Length=226, Percent_Identity=27.8761061946903, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35009; Mature: 34877

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00062 ALDOKETO_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEV
CCCCEECCCCCEECCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCHHH
YGNGLSEELLGKFMQETERPVQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQV
HCCCCCHHHHHHHHHHCCCCEEEHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEEE
HWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQAHKILEKRGVILATNQVKY
ECCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECHHHH
SLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE
HHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCHH
KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHCCHHHHHH
EFNQLEQITRPWLN
HHHHHHHHHHCCCC
>Mature Secondary Structure 
ATTTLGTTGITVNPICIGTWAWGDKLFWNYGSNYGANEVEAAFKTSLEAGVNFFDTAEV
CCCEECCCCCEECCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCHHH
YGNGLSEELLGKFMQETERPVQIATKYGPLPWRLFPDSVADAVTASLKRLIVPKVTLYQV
HCCCCCHHHHHHHHHHCCCCEEEHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCEEEEEE
HWPFTFLMSQETLLNALADEVKQGRIEAVGVSNYSEEEMSQAHKILEKRGVILATNQVKY
ECCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECHHHH
SLLSRKIETKGILNTAKKLGITILAYSPLAQGLLTGKYTLEKSPTGARQFDFRFQKSGLE
HHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCHH
KIAPVMSLLNQIGEKYNKTPAQVALNWLVFQDSVIPIAGCKNSEQVRQNIGAIGWEMTQE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHCCHHHHHH
EFNQLEQITRPWLN
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]