The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474186

Identifier: 113474186

GI number: 113474186

Start: 451430

End: 452728

Strand: Reverse

Name: 113474186

Synonym: Tery_0294

Alternate gene names: NA

Gene position: 452728-451430 (Counterclockwise)

Preceding gene: 113474188

Following gene: 113474185

Centisome position: 5.84

GC content: 35.95

Gene sequence:

>1299_bases
ATGAATAAATTTGAAACCTCTGATTTTTTACTACCTTTACCAGTAATGCCTTCAGAGGAAAATACATTTGCCCATTACAC
AATTGTTTGTAGACTACCAGGTGTTATCGAACGAGTCATCAAAGACAATAATTTTCCTCCTCCCATTGTGCAAGAATTAG
AATTTTTAGTAACAGACTTATTTGAAGGATGGGTGCGTCCTTTGAAAGATGATCAAGGGCCAGATTTAGTTGCCTGGGAA
TCCTATTTAAAACCTTTTGAGGGGAAAAGTTGGTTTGATTTACCATTTTATTTTGCTGAAGCTTATTTTTTCCGGCGTTT
GCTTGAGGCAACTAATTATTTTGTACCTGGAATTTGGCAAGGCATAGACCCATTTGGTTATCAAAAACGCTTGAGTTTAG
AAAAATCAATGGATGCTATTAGATTTATAAGTGATAGCGTTAGGGTGGCGCAGCAATATTCCTTGACTACTTTAAGTACT
ATAAAATCTGAACAACAGACTTATCAAACTTTTATAACTACTGTGCTTCAAGCTGTTTTATGGGGTGAACAATTTGATCT
CACTTTATGGCAAGCTATAGCAGGAGATAATACTAATAGATATCTTACACAGCAACAAACTCACATTTTAGTAGATGATA
CCTATAATCTACTCAACTACTTAAGCAATATTCAAGGGCAACGAATATATCTAATTATAACAGATAACGCAAGTTTTGAG
TTAGTTGGCGATTTTTTTTTGATAGACTTCCTTTTATCTACTCAAACTGCTCATACTGTTTATCTACACTTGAAAGCATA
TCCAACTTTTGTTTCTGATGCTATACATCAGGATGTCTTTTACACTCTAGAAAGGTTAGCTAATGATACCTCAGAAAATG
TCCGAATTTTGGCAGCTCGTTTGCAGGAGTACATTGCTACTGGTTGTTTAATTTGTCAAGATAACCTTTTCTGGAATGCT
CCTCTAGCTTTTTGGGAAATGCCAGAGTCTTTAAGGGAAGAGTTAGCTAAGGCTAGTTTAGTTGTAATTAAGGGAGATGC
TAACTATCGGCGTATTTTGGGCGATCGCCATTGGCTATTTACTACACCTTTGTCAGATATTGCTAATTATTTTCCCGCAC
CATTTGTCGCTTTGCGTACCCTCAAGTCAGAAGTAGCAACCAGTTTAGAACCAGATCAAATCGAAATATTAAATGAACAA
GACCCTCTGTGGTTAACTAATGGTCAGTGGGGTGTAATTCAGTTTGTAATACCAGAGAAGTTGAATAATTCAGGACTTAC
ACAAATACACTACATATAG

Upstream 100 bases:

>100_bases
ACATTTGGTATAATTATTAATATTTTTGGACAAAGCAATGGTTATTGTGCTGTTAGTCCTGATAGTTATATTTTAGGTTA
TTTCTGATTTTTTTAAATAT

Downstream 100 bases:

>100_bases
TGCCCACCAATTTAGGTGATCGCTTAAATTTTTATAGCGATCGCCCGTTATTACTGATTTTTACAAATCTATAAAACTTC
AATAACTGTCATTTTAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MNKFETSDFLLPLPVMPSEENTFAHYTIVCRLPGVIERVIKDNNFPPPIVQELEFLVTDLFEGWVRPLKDDQGPDLVAWE
SYLKPFEGKSWFDLPFYFAEAYFFRRLLEATNYFVPGIWQGIDPFGYQKRLSLEKSMDAIRFISDSVRVAQQYSLTTLST
IKSEQQTYQTFITTVLQAVLWGEQFDLTLWQAIAGDNTNRYLTQQQTHILVDDTYNLLNYLSNIQGQRIYLIITDNASFE
LVGDFFLIDFLLSTQTAHTVYLHLKAYPTFVSDAIHQDVFYTLERLANDTSENVRILAARLQEYIATGCLICQDNLFWNA
PLAFWEMPESLREELAKASLVVIKGDANYRRILGDRHWLFTTPLSDIANYFPAPFVALRTLKSEVATSLEPDQIEILNEQ
DPLWLTNGQWGVIQFVIPEKLNNSGLTQIHYI

Sequences:

>Translated_432_residues
MNKFETSDFLLPLPVMPSEENTFAHYTIVCRLPGVIERVIKDNNFPPPIVQELEFLVTDLFEGWVRPLKDDQGPDLVAWE
SYLKPFEGKSWFDLPFYFAEAYFFRRLLEATNYFVPGIWQGIDPFGYQKRLSLEKSMDAIRFISDSVRVAQQYSLTTLST
IKSEQQTYQTFITTVLQAVLWGEQFDLTLWQAIAGDNTNRYLTQQQTHILVDDTYNLLNYLSNIQGQRIYLIITDNASFE
LVGDFFLIDFLLSTQTAHTVYLHLKAYPTFVSDAIHQDVFYTLERLANDTSENVRILAARLQEYIATGCLICQDNLFWNA
PLAFWEMPESLREELAKASLVVIKGDANYRRILGDRHWLFTTPLSDIANYFPAPFVALRTLKSEVATSLEPDQIEILNEQ
DPLWLTNGQWGVIQFVIPEKLNNSGLTQIHYI
>Mature_432_residues
MNKFETSDFLLPLPVMPSEENTFAHYTIVCRLPGVIERVIKDNNFPPPIVQELEFLVTDLFEGWVRPLKDDQGPDLVAWE
SYLKPFEGKSWFDLPFYFAEAYFFRRLLEATNYFVPGIWQGIDPFGYQKRLSLEKSMDAIRFISDSVRVAQQYSLTTLST
IKSEQQTYQTFITTVLQAVLWGEQFDLTLWQAIAGDNTNRYLTQQQTHILVDDTYNLLNYLSNIQGQRIYLIITDNASFE
LVGDFFLIDFLLSTQTAHTVYLHLKAYPTFVSDAIHQDVFYTLERLANDTSENVRILAARLQEYIATGCLICQDNLFWNA
PLAFWEMPESLREELAKASLVVIKGDANYRRILGDRHWLFTTPLSDIANYFPAPFVALRTLKSEVATSLEPDQIEILNEQ
DPLWLTNGQWGVIQFVIPEKLNNSGLTQIHYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI13375746, Length=354, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17560374, Length=463, Percent_Identity=27.4298056155508, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6323669, Length=474, Percent_Identity=22.9957805907173, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24657556, Length=450, Percent_Identity=27.3333333333333, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24657549, Length=450, Percent_Identity=26.6666666666667, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24657542, Length=378, Percent_Identity=26.984126984127, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI20129541, Length=434, Percent_Identity=26.7281105990783, Blast_Score=138, Evalue=6e-33,
Organism=Drosophila melanogaster, GI20130225, Length=453, Percent_Identity=25.1655629139073, Blast_Score=122, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49972; Mature: 49972

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFETSDFLLPLPVMPSEENTFAHYTIVCRLPGVIERVIKDNNFPPPIVQELEFLVTDL
CCCCCCCCCEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FEGWVRPLKDDQGPDLVAWESYLKPFEGKSWFDLPFYFAEAYFFRRLLEATNYFVPGIWQ
HHHHHCCCCCCCCCCEEEHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCHHC
GIDPFGYQKRLSLEKSMDAIRFISDSVRVAQQYSLTTLSTIKSEQQTYQTFITTVLQAVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGEQFDLTLWQAIAGDNTNRYLTQQQTHILVDDTYNLLNYLSNIQGQRIYLIITDNASFE
CCCCCCHHHHHHHHCCCCCCEEECCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCCCEE
LVGDFFLIDFLLSTQTAHTVYLHLKAYPTFVSDAIHQDVFYTLERLANDTSENVRILAAR
EHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQEYIATGCLICQDNLFWNAPLAFWEMPESLREELAKASLVVIKGDANYRRILGDRHWLF
HHHHHHHCEEEEECCCEECCCHHHHCCCHHHHHHHHHCEEEEEECCCCHHHHHCCCCEEE
TTPLSDIANYFPAPFVALRTLKSEVATSLEPDQIEILNEQDPLWLTNGQWGVIQFVIPEK
ECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEEEEEEECCC
LNNSGLTQIHYI
CCCCCCCEEEEC
>Mature Secondary Structure
MNKFETSDFLLPLPVMPSEENTFAHYTIVCRLPGVIERVIKDNNFPPPIVQELEFLVTDL
CCCCCCCCCEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FEGWVRPLKDDQGPDLVAWESYLKPFEGKSWFDLPFYFAEAYFFRRLLEATNYFVPGIWQ
HHHHHCCCCCCCCCCEEEHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCHHC
GIDPFGYQKRLSLEKSMDAIRFISDSVRVAQQYSLTTLSTIKSEQQTYQTFITTVLQAVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGEQFDLTLWQAIAGDNTNRYLTQQQTHILVDDTYNLLNYLSNIQGQRIYLIITDNASFE
CCCCCCHHHHHHHHCCCCCCEEECCCCEEEECCHHHHHHHHHCCCCCEEEEEEECCCCEE
LVGDFFLIDFLLSTQTAHTVYLHLKAYPTFVSDAIHQDVFYTLERLANDTSENVRILAAR
EHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LQEYIATGCLICQDNLFWNAPLAFWEMPESLREELAKASLVVIKGDANYRRILGDRHWLF
HHHHHHHCEEEEECCCEECCCHHHHCCCHHHHHHHHHCEEEEEECCCCHHHHHCCCCEEE
TTPLSDIANYFPAPFVALRTLKSEVATSLEPDQIEILNEQDPLWLTNGQWGVIQFVIPEK
ECCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEEEEEEECCC
LNNSGLTQIHYI
CCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA