The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474173

Identifier: 113474173

GI number: 113474173

Start: 431013

End: 431618

Strand: Reverse

Name: 113474173

Synonym: Tery_0279

Alternate gene names: NA

Gene position: 431618-431013 (Counterclockwise)

Preceding gene: 113474174

Following gene: 113474172

Centisome position: 5.57

GC content: 38.45

Gene sequence:

>606_bases
ATGAACCTAGAATTAATAGATAGTTTGACTGCCCAAGTTGGGGCAAATGGGCTTCCTTACGCTATCCCAATTCATCCAAA
CTTAGTTCATCTGACTCTAGGTCTGTTTATTATGGGAATTGCTTTTGATATTGTTGGCATATTGTTCCCTCTACAAAAAC
CAGTCCTGAAAGTTTTAGCGATATCTGCTACTCGTTCCAACTTTTTTGATGTAGGTTGGTACAATATGTTAGCTTCATCA
ATTATCACATTTTTCACCGTAGCAGCAGGATTTTATGAAATCATGCTAGCGACACCATCTCCTGAACTTAAAAGTGTATG
GGGTTTAGGAGCAATGGATACAATGTTATGGCATGGCATTGGCGGTGTGTTGCTATTAGCAATGATTATAGGTATGACGA
TTTGGAGGGGATTTCAACGTTATATTTGGTCTCAGGATAAACTCCTACAAGTACAATGGAGTTATTTAGCAGTAGGTTTA
GTAATCCTTTTTGTTATGTACGTTCATGGTACTTTGGGCGCACAGTTAGCAGCAGAGTTTGGAGTACATAATACTGCTGA
TGCCTTGTTAGAACTAGGCAAAGATCCTAATATTGTCCTGAAATAA

Upstream 100 bases:

>100_bases
GAATAGTCTGCCTTCAAGTTTACTTGGGAGATGAATTAGTTTGGGTTTATGGACTACACACAGTGCCAGTAGTGGAAGCA
ATAAAGGAGGGAATTTTACA

Downstream 100 bases:

>100_bases
TCTTAGTAGGATATTGATATGAAAACCCGCACTATTTTAACCTTGGGGGCGATCGCTCTCTTGTTAGCTGCTATTAGTAT
TTGGATCGGGCAACTCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNLELIDSLTAQVGANGLPYAIPIHPNLVHLTLGLFIMGIAFDIVGILFPLQKPVLKVLAISATRSNFFDVGWYNMLASS
IITFFTVAAGFYEIMLATPSPELKSVWGLGAMDTMLWHGIGGVLLLAMIIGMTIWRGFQRYIWSQDKLLQVQWSYLAVGL
VILFVMYVHGTLGAQLAAEFGVHNTADALLELGKDPNIVLK

Sequences:

>Translated_201_residues
MNLELIDSLTAQVGANGLPYAIPIHPNLVHLTLGLFIMGIAFDIVGILFPLQKPVLKVLAISATRSNFFDVGWYNMLASS
IITFFTVAAGFYEIMLATPSPELKSVWGLGAMDTMLWHGIGGVLLLAMIIGMTIWRGFQRYIWSQDKLLQVQWSYLAVGL
VILFVMYVHGTLGAQLAAEFGVHNTADALLELGKDPNIVLK
>Mature_201_residues
MNLELIDSLTAQVGANGLPYAIPIHPNLVHLTLGLFIMGIAFDIVGILFPLQKPVLKVLAISATRSNFFDVGWYNMLASS
IITFFTVAAGFYEIMLATPSPELKSVWGLGAMDTMLWHGIGGVLLLAMIIGMTIWRGFQRYIWSQDKLLQVQWSYLAVGL
VILFVMYVHGTLGAQLAAEFGVHNTADALLELGKDPNIVLK

Specific function: Unknown

COG id: COG4244

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22051; Mature: 22051

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLELIDSLTAQVGANGLPYAIPIHPNLVHLTLGLFIMGIAFDIVGILFPLQKPVLKVLA
CCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISATRSNFFDVGWYNMLASSIITFFTVAAGFYEIMLATPSPELKSVWGLGAMDTMLWHGI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHHHHHHHHH
GGVLLLAMIIGMTIWRGFQRYIWSQDKLLQVQWSYLAVGLVILFVMYVHGTLGAQLAAEF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVHNTADALLELGKDPNIVLK
CCCCHHHHHHHHCCCCCEEEC
>Mature Secondary Structure
MNLELIDSLTAQVGANGLPYAIPIHPNLVHLTLGLFIMGIAFDIVGILFPLQKPVLKVLA
CCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISATRSNFFDVGWYNMLASSIITFFTVAAGFYEIMLATPSPELKSVWGLGAMDTMLWHGI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHHHHHHHHH
GGVLLLAMIIGMTIWRGFQRYIWSQDKLLQVQWSYLAVGLVILFVMYVHGTLGAQLAAEF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVHNTADALLELGKDPNIVLK
CCCCHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA