| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is bcp [C]
Identifier: 113474134
GI number: 113474134
Start: 363849
End: 364400
Strand: Reverse
Name: bcp [C]
Synonym: Tery_0234
Alternate gene names: 113474134
Gene position: 364400-363849 (Counterclockwise)
Preceding gene: 113474135
Following gene: 113474131
Centisome position: 4.7
GC content: 31.88
Gene sequence:
>552_bases ATGCTAACTTCTTATGATTTTAGGGGTTTACTAAATCAACGTTTTTTTCAAAATTTATTACCTATTCCAGCTATTAATGA TTTGGATAATGGTAAAAGAACGCCAGATTTTGAATTACCAGATATTACAAATGGTAAGTTGGTTAGATTATCTAACTATT GGGGAGTAACTCCTGTCATAGTTGCCTTGACTCGTATTTTTACTGAAAAGCAGTATTGCCCGTTTTGTTTTCCTCATATT TTGGCTTTAAACAAAAATTATGAAAGGTTTTTAGAACGAGGAGTAGAAGTATTAATGATTACTAGTACCGATGAGAAGCA AAGTAAGATAGTTGTGAATGATTTAAGTTTAAAAATGCCATTGCTTAGTGATTCTAGCTGTCAGGTATTTAAAAATTACA AGGTTGGTCAAGCTTTAGGGGCGCCTTTATCAGGGCAGTTTGTATTGGATAAACAGGGTAGACTTTGCTACAAACATTTG TTTTCTTTTCTAGATCATAATGCTAGTATTGAGGACTTGTTGGGTATTTTAGATAATTATATTTTTGAGTAA
Upstream 100 bases:
>100_bases ATTTCCAGAAATATTCACTCCAACACTATGGCTGAGATGTTTGACCTCAAAGTGTTGGAGTTATAAATTTGAAATGTTGA CTCTTTAATTAATTCTGATT
Downstream 100 bases:
>100_bases AATAATTATTTACAGTTGAAATTAAGCACCATTACATTCATTGTTTTCTTACTCTAATTTGAAGTGAGTCATACAGCATA AAAATTTTGGTATCACAAAT
Product: redoxin
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Antioxidant AhpC/TSA Family; Thiol-Specific Antioxidant Protein; Redoxin
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL FSFLDHNASIEDLLGILDNYIFE
Sequences:
>Translated_183_residues MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL FSFLDHNASIEDLLGILDNYIFE >Mature_183_residues MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVIVALTRIFTEKQYCPFCFPHI LALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMPLLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHL FSFLDHNASIEDLLGILDNYIFE
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20974; Mature: 20974
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH VALTRIFTEKQYCPFCFPHILALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMP HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCEEECC LLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHLFSFLDHNASIEDLLGILDNY CCCCCCHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH IFE HCC >Mature Secondary Structure MLTSYDFRGLLNQRFFQNLLPIPAINDLDNGKRTPDFELPDITNGKLVRLSNYWGVTPVI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH VALTRIFTEKQYCPFCFPHILALNKNYERFLERGVEVLMITSTDEKQSKIVVNDLSLKMP HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCEEECC LLSDSSCQVFKNYKVGQALGAPLSGQFVLDKQGRLCYKHLFSFLDHNASIEDLLGILDNY CCCCCCHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH IFE HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA