| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is murI
Identifier: 113474067
GI number: 113474067
Start: 242603
End: 243415
Strand: Reverse
Name: murI
Synonym: Tery_0161
Alternate gene names: 113474067
Gene position: 243415-242603 (Counterclockwise)
Preceding gene: 113474068
Following gene: 113474064
Centisome position: 3.14
GC content: 34.07
Gene sequence:
>813_bases ATGACTACTGAAACCAGACAAAAAAGAATAGGAATTTTTGACAGTGGGATAGGTGGCTTAACTGTTTTAAGAGAATTATA TAGACAGTTACCCAAAGAATCTATTCTTTACTTTGCCGATACAGCAAGATTACCTTATGGAACAAGAACTACCGAAGAGA TTTTACAATTTGTAGATGAAATTATTACATGGCTAGTCAAAAGTGGAGTAAAAATGGTGTTGATGGCTTGCAATACCAGT TCAGCTTTGGCTCTAGAAAAAGTTAAATCAAAATTTGATGTTCCTATTCTAGGATTAATTGTACCTGGAGCTAATACTGC AGTGAAACAAGGAAAGAGAATAGGTGTTATTGCGACTCCTGCAACTGCTGCTAGTAATGCATATCGTTATGCTATTTTAG AAGCAAATGCTTCTGTTCAAGTTTGGCAAGTTGGTTGTCCCTATTTCGTACCATTAATAGAGCAAAATCAGCTACATGAT CCCTACACATATCAGATAGCAGAAGAATATTTAATGCCTCTAATACAGCAACAAATTGATACATTAGTTTATGGTTGCAC TCACTATCCTTATTTAGAACCAATATTGCGTTCATTATTACCTAAGTCGGTGATTTTTGTAGATCCTGCAGTTTCTCTGG TTAAGGTAGTAGCTAGAGAGTTAAAAATTATGAATTTGGAAAACGATAAAACACCAAAACCAACAAAATTTGTAGTTAGT TCTTCTCCACAAAAATTTGCTGATTTATCATTACAATTGCTTGGTTACAAACCAGATGTACAAGTAATTTCTTTACCAGC TATGCTAAAGTAA
Upstream 100 bases:
>100_bases TCAGAGGTTAAATTCGCAACACAGACTAAATTTGAGAGGCGTGAGAAGCTCTTAACTGCCCCGAGGACTGCTATAGTTGA TTTATGTAAATACTCAAATA
Downstream 100 bases:
>100_bases TTTAATGCTAGTTTCTATATAGACTTCACAGAGGCAGATTTATTCTAATTAATTCTGTTTATATAAAAGATATGCTATTA AGCCTTATAAGTTATGATTA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTS SALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHD PYTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS SSPQKFADLSLQLLGYKPDVQVISLPAMLK
Sequences:
>Translated_270_residues MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTS SALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHD PYTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS SSPQKFADLSLQLLGYKPDVQVISLPAMLK >Mature_269_residues TTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIITWLVKSGVKMVLMACNTSS ALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATPATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDP YTYQIAEEYLMPLIQQQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVSS SPQKFADLSLQLLGYKPDVQVISLPAMLK
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=212, Percent_Identity=28.7735849056604, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_TRIEI (Q11A19)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720128.1 - ProteinModelPortal: Q11A19 - SMR: Q11A19 - STRING: Q11A19 - GeneID: 4241754 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0161 - NMPDR: fig|203124.1.peg.1717 - eggNOG: COG0796 - HOGENOM: HBG645102 - OMA: AILGCTH - PhylomeDB: Q11A19 - ProtClustDB: PRK00865 - BioCyc: TERY203124:TERY_0161-MONOMER - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 30096; Mature: 29964
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDE CCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHH IITWLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATP HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECC ATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQQQID CHHCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS HHHHCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC SSPQKFADLSLQLLGYKPDVQVISLPAMLK CCCHHHHHCEEEEECCCCCCEEEECCCCCC >Mature Secondary Structure TTETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDE CCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCHHHHHHHHHH IITWLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGKRIGVIATP HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECC ATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQNQLHDPYTYQIAEEYLMPLIQQQID CHHCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTKFVVS HHHHCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEC SSPQKFADLSLQLLGYKPDVQVISLPAMLK CCCHHHHHCEEEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA