Click here to switch to the map view.

The map label for this gene is 113474056

Identifier: 113474056

GI number: 113474056

Start: 219182

End: 219649

Strand: Reverse

Name: 113474056

Synonym: Tery_0149

Alternate gene names: NA

Gene position: 219649-219182 (Counterclockwise)

Preceding gene: 113474057

Following gene: 113474053

Centisome position: 2.83

GC content: 40.81

Gene sequence:

>468_bases
ATGGAATTATTATCAAAACAGCTTGATGATCTTGACAAACAAATAGAAAAAAAACTTGAAGGGATGGTAAAAACAGTTAA
TCAGTTTTCCCAGTCTATTAAAGATCTTGAAGATGACTTAAAAACTCAAGTCTCAGCAGTTCGACGTCAATTGCAGGCAA
TACCAGAACTAGATTCTACCGTAGAAGTAGAAGCTAAAACTGAGACAGCACCTAAGACAACGACCAAGAGCAAGCCAACC
TCGACAACCTCTAGGTCTAAGGCGACTACCACCAAAACAAGTACTAGAAAGACTAAAGCTAACTCAGCATCTCAGGTAGA
ACCAGAAGTTCCTGTTGATGACTACGATACCAAATCACTCAGACAACTTAAGAAAATTGCCCAAGAGCGGAAATTACGTG
GTTATGCGCGAATGAAACGCCCGGAAATTCTCAAGGCTCTTCGGGAAGCTGATGCTGCTGCTAGTTAA

Upstream 100 bases:

>100_bases
TGTCCTAGAAAATTAAGTTTATAATAAGGTAGAAACATTGGTAAGAAAAACCACAAATTCAACAACTAAAAAGACAATAT
CTAGCTCTACAGGAGTGAAA

Downstream 100 bases:

>100_bases
GATCAGCTTAATCCTGAATATCAAAAGTTAAGTAATTAGGGGTTGTACGATCATGGGATGACTTTGATATATGCCAAAAG
TCTGTCCCAAAATCAATAGT

Product: Rho termination factor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MELLSKQLDDLDKQIEKKLEGMVKTVNQFSQSIKDLEDDLKTQVSAVRRQLQAIPELDSTVEVEAKTETAPKTTTKSKPT
STTSRSKATTTKTSTRKTKANSASQVEPEVPVDDYDTKSLRQLKKIAQERKLRGYARMKRPEILKALREADAAAS

Sequences:

>Translated_155_residues
MELLSKQLDDLDKQIEKKLEGMVKTVNQFSQSIKDLEDDLKTQVSAVRRQLQAIPELDSTVEVEAKTETAPKTTTKSKPT
STTSRSKATTTKTSTRKTKANSASQVEPEVPVDDYDTKSLRQLKKIAQERKLRGYARMKRPEILKALREADAAAS
>Mature_155_residues
MELLSKQLDDLDKQIEKKLEGMVKTVNQFSQSIKDLEDDLKTQVSAVRRQLQAIPELDSTVEVEAKTETAPKTTTKSKPT
STTSRSKATTTKTSTRKTKANSASQVEPEVPVDDYDTKSLRQLKKIAQERKLRGYARMKRPEILKALREADAAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17366; Mature: 17366

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLSKQLDDLDKQIEKKLEGMVKTVNQFSQSIKDLEDDLKTQVSAVRRQLQAIPELDST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VEVEAKTETAPKTTTKSKPTSTTSRSKATTTKTSTRKTKANSASQVEPEVPVDDYDTKSL
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RQLKKIAQERKLRGYARMKRPEILKALREADAAAS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELLSKQLDDLDKQIEKKLEGMVKTVNQFSQSIKDLEDDLKTQVSAVRRQLQAIPELDST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VEVEAKTETAPKTTTKSKPTSTTSRSKATTTKTSTRKTKANSASQVEPEVPVDDYDTKSL
EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RQLKKIAQERKLRGYARMKRPEILKALREADAAAS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA