| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474030
Identifier: 113474030
GI number: 113474030
Start: 166446
End: 167438
Strand: Reverse
Name: 113474030
Synonym: Tery_0121
Alternate gene names: NA
Gene position: 167438-166446 (Counterclockwise)
Preceding gene: 113474031
Following gene: 113474029
Centisome position: 2.16
GC content: 30.01
Gene sequence:
>993_bases ATGGAAAATAGTAATAATGGTAAATTATATGAAGATTTACCAGAGGAATTTATTAAGTGGGCTTATCGCTTGTTTTTAGA TAGGGAAGTTGAAAACCAGGATGCCATAGAAGATAAAAAAAGAAGAATAAAAAATTGTCGAGATTTAAGAGATATTTTTT TAAACTCAGAAGAGTTTAAAGCCAAAAATCAGTGGCATAAACCTTTACCACAACTTACTGATAAAAGTATTGTCTATGTA GAAAATGTAGCCCCAGGACGAGAATTAGCCCTTTTATTTAATCATATTCAAAATACTTGGTCTTATTTAGGTAAAACAGA ACCTCATTGGTCTGTATTGTCCGCAGAAAACTTTAAACAAGATAATATTTCACAGACAATTAATTTATTTAACGAAACAG GTAAAAATGAAGTATCAAAATTATTTGCCTCCTTAGATAGAAATCAATTGGATTATAAATCATTTAAGTCAGCTATTGAA TATGGTTGTGGAGTTGGTAGAGTTACAAGATGGTTGGCTGAAAAGTTTGAAGTTGTTTACGGCTATGATATATCCTCATC CCACTTGAAGGTTGCTCATCAATATATGACTGAGGTAGAAATCAAAAATGTTCAGTTAAATCAATTGGTTGCTCTTAGAG ATCTCAAAAAACTTCCTCAGGTAGATTTCATATATTCAGTAATAGTTTTACAACATAATCCTCCTCCAATTATTGCCTTC ATTATTAAACAATTTATGAATTCTCTTAACTCTGGGGGTGTAGCTTTTTTTCAAGTTCCCACCTATAAACATGGATATAA ATTTTCTTTGAAAGAATATTTGAATGATCTTAATAAAGAAGCAGAAAATAATCAAATAGAAATGCATATTCTACCTCAAA AAGATATTTTTACAATTATTAGACAAATGGATGCTAAGTTAATTGAAGTTACAGAGGATAATTGGGCAGGGGAGGGATAT ATATCAAATACGTTTATAGTTCAAAAAAACTGA
Upstream 100 bases:
>100_bases TTTCAGCAGTTGTTGTAGCATCTATTTTTAAGAAAATTTTTCATAATTTCTCTTAATGAAAATAGTTTTATATTAATTTA ATAGGAGTATTTTGTATCTA
Downstream 100 bases:
>100_bases CAGGGGCGATCGCCAATATTAGATAGTAAGTAGGTATGCATAAATCAAGGTTAAAATCAAGGTTAAAATCAAAAATATGA AAAAATACCTAAAAGGAAAT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MENSNNGKLYEDLPEEFIKWAYRLFLDREVENQDAIEDKKRRIKNCRDLRDIFLNSEEFKAKNQWHKPLPQLTDKSIVYV ENVAPGRELALLFNHIQNTWSYLGKTEPHWSVLSAENFKQDNISQTINLFNETGKNEVSKLFASLDRNQLDYKSFKSAIE YGCGVGRVTRWLAEKFEVVYGYDISSSHLKVAHQYMTEVEIKNVQLNQLVALRDLKKLPQVDFIYSVIVLQHNPPPIIAF IIKQFMNSLNSGGVAFFQVPTYKHGYKFSLKEYLNDLNKEAENNQIEMHILPQKDIFTIIRQMDAKLIEVTEDNWAGEGY ISNTFIVQKN
Sequences:
>Translated_330_residues MENSNNGKLYEDLPEEFIKWAYRLFLDREVENQDAIEDKKRRIKNCRDLRDIFLNSEEFKAKNQWHKPLPQLTDKSIVYV ENVAPGRELALLFNHIQNTWSYLGKTEPHWSVLSAENFKQDNISQTINLFNETGKNEVSKLFASLDRNQLDYKSFKSAIE YGCGVGRVTRWLAEKFEVVYGYDISSSHLKVAHQYMTEVEIKNVQLNQLVALRDLKKLPQVDFIYSVIVLQHNPPPIIAF IIKQFMNSLNSGGVAFFQVPTYKHGYKFSLKEYLNDLNKEAENNQIEMHILPQKDIFTIIRQMDAKLIEVTEDNWAGEGY ISNTFIVQKN >Mature_330_residues MENSNNGKLYEDLPEEFIKWAYRLFLDREVENQDAIEDKKRRIKNCRDLRDIFLNSEEFKAKNQWHKPLPQLTDKSIVYV ENVAPGRELALLFNHIQNTWSYLGKTEPHWSVLSAENFKQDNISQTINLFNETGKNEVSKLFASLDRNQLDYKSFKSAIE YGCGVGRVTRWLAEKFEVVYGYDISSSHLKVAHQYMTEVEIKNVQLNQLVALRDLKKLPQVDFIYSVIVLQHNPPPIIAF IIKQFMNSLNSGGVAFFQVPTYKHGYKFSLKEYLNDLNKEAENNQIEMHILPQKDIFTIIRQMDAKLIEVTEDNWAGEGY ISNTFIVQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38568; Mature: 38568
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSNNGKLYEDLPEEFIKWAYRLFLDREVENQDAIEDKKRRIKNCRDLRDIFLNSEEFK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AKNQWHKPLPQLTDKSIVYVENVAPGRELALLFNHIQNTWSYLGKTEPHWSVLSAENFKQ HHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC DNISQTINLFNETGKNEVSKLFASLDRNQLDYKSFKSAIEYGCGVGRVTRWLAEKFEVVY CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEE GYDISSSHLKVAHQYMTEVEIKNVQLNQLVALRDLKKLPQVDFIYSVIVLQHNPPPIIAF ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHH IIKQFMNSLNSGGVAFFQVPTYKHGYKFSLKEYLNDLNKEAENNQIEMHILPQKDIFTII HHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH RQMDAKLIEVTEDNWAGEGYISNTFIVQKN HHHCCCEEEEECCCCCCCCEECCEEEEECC >Mature Secondary Structure MENSNNGKLYEDLPEEFIKWAYRLFLDREVENQDAIEDKKRRIKNCRDLRDIFLNSEEFK CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AKNQWHKPLPQLTDKSIVYVENVAPGRELALLFNHIQNTWSYLGKTEPHWSVLSAENFKQ HHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC DNISQTINLFNETGKNEVSKLFASLDRNQLDYKSFKSAIEYGCGVGRVTRWLAEKFEVVY CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEE GYDISSSHLKVAHQYMTEVEIKNVQLNQLVALRDLKKLPQVDFIYSVIVLQHNPPPIIAF ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHH IIKQFMNSLNSGGVAFFQVPTYKHGYKFSLKEYLNDLNKEAENNQIEMHILPQKDIFTII HHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH RQMDAKLIEVTEDNWAGEGYISNTFIVQKN HHHCCCEEEEECCCCCCCCEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA