| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474029
Identifier: 113474029
GI number: 113474029
Start: 165274
End: 166119
Strand: Reverse
Name: 113474029
Synonym: Tery_0120
Alternate gene names: NA
Gene position: 166119-165274 (Counterclockwise)
Preceding gene: 113474030
Following gene: 113474028
Centisome position: 2.14
GC content: 30.14
Gene sequence:
>846_bases ATGGATAGTAAAGATATAGAGCAATTTATTCTGAAGTTTGATGTGGCTGCTTTGCACAAGCAAAGAAATAAGATACTTAA TAAACCTAATTTAATTGGAGTAGGAGCAGGGAGGTGTGGAACTACATCCTTATATCAATATTTAGCAGCACATAAAGATG TTTATATGTCTCCAGTGAAGGAAATCAATTACTTTGGTATCAGAAATACTGAAAAAAATAAGTATGGAATAACTTTTAGG GAATATCTCTATTATTTTATGGGGGCAGAAAGTCAAAAATGTATTGGGGAAATTTCTCCTATTTATCTTGGTATTCCAGA ATGTGCTTCTCTGATAAATGAAAAGTTGGGAAATATTAAGATATTGATTACTATTCGAGATCCTATAGAAAGAATGATAT CTCATTATAAACACCATTTAGATAAACATCAAATAAATGATCTTAATGAATACTGTGAAAAGGGTCTGAAGATACTTAGA GACCATGAAGAAAAAAAATACCAACTTAATTGGTTTCATCCTGTTAAAAACATGACGCAATCTCTTTATTTTGAGGGAGT AAAGAGATATATCCAGCAATTTGGGAAGGAAAATGTTTTGATAATTACTTATGATCAACTAAAGAAGCATTCAAAAGTAG TATTAAAAGAAATTAATCAGTTTTTGGCTATTGAGGATGTCGAACAAGAGTTGTATAAAGCTAACTCTTCGCCGAAAGAT AGAGATAAAGATTTTCAATTAAATAGAGAGACAATGAAGGAACTTTTAGAAAAGTTTAATGAGGACCTAGCCAAATTAGA TGAATTAACTGGATTAAAGACAACTCATTGGTTAGAAAAATATTAA
Upstream 100 bases:
>100_bases GAAAAAAGATCCAATTATGAAGTTAGCCTGTGGCAAAAGTATTTCTGGTCTAAGACAAAAAAAGTAATCAAATTAAACAA AATAAGGTCAAATATTCATA
Downstream 100 bases:
>100_bases AAAGTACATTTTGTTAATTTCCTATATTTTATGATTTATGTTATGTTCAGAAAAAGGGAAGATTATTAATAATTTATTTA CGCAAACAAAAGGTATTATT
Product: sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily; Sulfotransferase Protein; Deacetylase Sulfotransferase; Sulfotransferase Domain Protein; 3-Beta-Hydroxysteroid Sulfotransferase; Sulfotransferase Domain-Containing Protein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MDSKDIEQFILKFDVAALHKQRNKILNKPNLIGVGAGRCGTTSLYQYLAAHKDVYMSPVKEINYFGIRNTEKNKYGITFR EYLYYFMGAESQKCIGEISPIYLGIPECASLINEKLGNIKILITIRDPIERMISHYKHHLDKHQINDLNEYCEKGLKILR DHEEKKYQLNWFHPVKNMTQSLYFEGVKRYIQQFGKENVLIITYDQLKKHSKVVLKEINQFLAIEDVEQELYKANSSPKD RDKDFQLNRETMKELLEKFNEDLAKLDELTGLKTTHWLEKY
Sequences:
>Translated_281_residues MDSKDIEQFILKFDVAALHKQRNKILNKPNLIGVGAGRCGTTSLYQYLAAHKDVYMSPVKEINYFGIRNTEKNKYGITFR EYLYYFMGAESQKCIGEISPIYLGIPECASLINEKLGNIKILITIRDPIERMISHYKHHLDKHQINDLNEYCEKGLKILR DHEEKKYQLNWFHPVKNMTQSLYFEGVKRYIQQFGKENVLIITYDQLKKHSKVVLKEINQFLAIEDVEQELYKANSSPKD RDKDFQLNRETMKELLEKFNEDLAKLDELTGLKTTHWLEKY >Mature_281_residues MDSKDIEQFILKFDVAALHKQRNKILNKPNLIGVGAGRCGTTSLYQYLAAHKDVYMSPVKEINYFGIRNTEKNKYGITFR EYLYYFMGAESQKCIGEISPIYLGIPECASLINEKLGNIKILITIRDPIERMISHYKHHLDKHQINDLNEYCEKGLKILR DHEEKKYQLNWFHPVKNMTQSLYFEGVKRYIQQFGKENVLIITYDQLKKHSKVVLKEINQFLAIEDVEQELYKANSSPKD RDKDFQLNRETMKELLEKFNEDLAKLDELTGLKTTHWLEKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33181; Mature: 33181
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKDIEQFILKFDVAALHKQRNKILNKPNLIGVGAGRCGTTSLYQYLAAHKDVYMSPVK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH EINYFGIRNTEKNKYGITFREYLYYFMGAESQKCIGEISPIYLGIPECASLINEKLGNIK HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHEECHHHHHHHHHHHHCCEE ILITIRDPIERMISHYKHHLDKHQINDLNEYCEKGLKILRDHEEKKYQLNWFHPVKNMTQ EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH SLYFEGVKRYIQQFGKENVLIITYDQLKKHSKVVLKEINQFLAIEDVEQELYKANSSPKD HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RDKDFQLNRETMKELLEKFNEDLAKLDELTGLKTTHWLEKY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MDSKDIEQFILKFDVAALHKQRNKILNKPNLIGVGAGRCGTTSLYQYLAAHKDVYMSPVK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH EINYFGIRNTEKNKYGITFREYLYYFMGAESQKCIGEISPIYLGIPECASLINEKLGNIK HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHEECHHHHHHHHHHHHCCEE ILITIRDPIERMISHYKHHLDKHQINDLNEYCEKGLKILRDHEEKKYQLNWFHPVKNMTQ EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH SLYFEGVKRYIQQFGKENVLIITYDQLKKHSKVVLKEINQFLAIEDVEQELYKANSSPKD HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RDKDFQLNRETMKELLEKFNEDLAKLDELTGLKTTHWLEKY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA