Click here to switch to the map view.

The map label for this gene is ycjJ [C]

Identifier: 113474013

GI number: 113474013

Start: 132007

End: 133308

Strand: Reverse

Name: ycjJ [C]

Synonym: Tery_0097

Alternate gene names: 113474013

Gene position: 133308-132007 (Counterclockwise)

Preceding gene: 113474015

Following gene: 113474006

Centisome position: 1.72

GC content: 38.79

Gene sequence:

>1302_bases
ATGGCATCTACACCTCAACTTCGGCGAGAAATTGGCGTGTTTGGCGCTACCCTCATGGGTAATGGTTCCATTCTTGGTAC
CGGAGTATTTGTCAGTATTGGTATTGCTGCTAGCATTGCAGGTCCGTCGGTAATTATTGCAGTAGCGGTAGCTGGTGTTG
TTGCTACCTGCAATGCTTTTAATAGTGCCCAGTTAGCGGCAAACCATCCCGTGAGTGGGGGTACTTATGAATATGGTTAC
AAATATCTAAATAATTGGTTGGGTTTTATTGCCGGATGGATGTTTCTATTCGCTAAAAGTGCTTCTGCTGCTACTGCTGC
TTTAGGTTTTGCTGGTTATTTCCTTAATGCTTTTGGTGTGAATAATAACACTTGGTTAGTATTGACTGCTTTAACTGCGG
TGGTTGTATTAACTATAGTTGTGTTAAGCGGAATTCGTCGTTCTAATGTTACTAATATTATTATTGTTTCTATTACCTTA
TTTTCTCTAGTTCTGTTTATTCTGGCAGGGGTACCTCAAGTGGTCTTCTCTGAAGGGAAGAATTTAATGCCTTTCTTTCC
AGGGGATAAACCTATAGCATCTTTACTGCAAGCCACTGCTTTAATGTTTGTCGCTTATACTGGTTATGGTCGTATTGCCA
CTTTGGGCGAGGAAGTAAAGGAACCACGACGTACTATTCCTAGAGCGATCGCTCTAACTATGATTTTTACCTGTGTATTA
TACATATCTACCGCTATAGTTAGTGTATTTGCGGGTCAAGAAGTAATTCAAAAATTATCTCAGGCAGATGTAAGTCTAGT
TGCACCTTTAGAAGTTATTGCTAAAGTGGGAGGTTTGGGTATTCCTGTTATTCCTAAGTTAATTGCTATTGGTGCTATTA
CGGCAATGTTGGGAGTACTGCTAAATCTGATTTTGGGGTTGTCGCGGGTTTTGTTAGCAATGGGGAGGCGACGAGATGTA
CCTAAAGTTGTTGCTAGGTTGGATAGTGGGCAAACTACACCTTATATAGCTGTAGTAATAGTAGGAGTAGCGATCGCTTG
TTTAGTTTTAATTGGAGATGTGAAAACTACTTGGTCTTTTAGTGCTTTTAATGTATTAATTTATTATGCTATTACTAATT
TTGCTGCCCTCCACCTTTCTCCAGAAGAAAGACTTTATCCTAAATGGTTAGGTTGGCTAGGTTTAGCTTCTTGTTTATTT
TTAGCTTTTTGGGTAGAAAAGCAAATTTGGTTAGTAGGTTTAGGATTAATTCTTATTGGTTTAATTTGGCATAGTTTGAT
TCATAGATTTATAACTGATTAG

Upstream 100 bases:

>100_bases
TACTCATCTCTACCCTTACTATAGGTTTCTTGTGCCACACGCTTATTGTTACCATATTTTCTATCTTTATACAACAAAGC
CGATAAAAATTAAAAATTAA

Downstream 100 bases:

>100_bases
ATTCACAATTTTTCTCAAGTTCCTTTCTTGACTTCTTCTTCCTTTTTCTTTTGAAAATAATAAAGGCTTACAGAACTTGG
AATCATAATTTTTCCGTCCT

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MASTPQLRREIGVFGATLMGNGSILGTGVFVSIGIAASIAGPSVIIAVAVAGVVATCNAFNSAQLAANHPVSGGTYEYGY
KYLNNWLGFIAGWMFLFAKSASAATAALGFAGYFLNAFGVNNNTWLVLTALTAVVVLTIVVLSGIRRSNVTNIIIVSITL
FSLVLFILAGVPQVVFSEGKNLMPFFPGDKPIASLLQATALMFVAYTGYGRIATLGEEVKEPRRTIPRAIALTMIFTCVL
YISTAIVSVFAGQEVIQKLSQADVSLVAPLEVIAKVGGLGIPVIPKLIAIGAITAMLGVLLNLILGLSRVLLAMGRRRDV
PKVVARLDSGQTTPYIAVVIVGVAIACLVLIGDVKTTWSFSAFNVLIYYAITNFAALHLSPEERLYPKWLGWLGLASCLF
LAFWVEKQIWLVGLGLILIGLIWHSLIHRFITD

Sequences:

>Translated_433_residues
MASTPQLRREIGVFGATLMGNGSILGTGVFVSIGIAASIAGPSVIIAVAVAGVVATCNAFNSAQLAANHPVSGGTYEYGY
KYLNNWLGFIAGWMFLFAKSASAATAALGFAGYFLNAFGVNNNTWLVLTALTAVVVLTIVVLSGIRRSNVTNIIIVSITL
FSLVLFILAGVPQVVFSEGKNLMPFFPGDKPIASLLQATALMFVAYTGYGRIATLGEEVKEPRRTIPRAIALTMIFTCVL
YISTAIVSVFAGQEVIQKLSQADVSLVAPLEVIAKVGGLGIPVIPKLIAIGAITAMLGVLLNLILGLSRVLLAMGRRRDV
PKVVARLDSGQTTPYIAVVIVGVAIACLVLIGDVKTTWSFSAFNVLIYYAITNFAALHLSPEERLYPKWLGWLGLASCLF
LAFWVEKQIWLVGLGLILIGLIWHSLIHRFITD
>Mature_432_residues
ASTPQLRREIGVFGATLMGNGSILGTGVFVSIGIAASIAGPSVIIAVAVAGVVATCNAFNSAQLAANHPVSGGTYEYGYK
YLNNWLGFIAGWMFLFAKSASAATAALGFAGYFLNAFGVNNNTWLVLTALTAVVVLTIVVLSGIRRSNVTNIIIVSITLF
SLVLFILAGVPQVVFSEGKNLMPFFPGDKPIASLLQATALMFVAYTGYGRIATLGEEVKEPRRTIPRAIALTMIFTCVLY
ISTAIVSVFAGQEVIQKLSQADVSLVAPLEVIAKVGGLGIPVIPKLIAIGAITAMLGVLLNLILGLSRVLLAMGRRRDVP
KVVARLDSGQTTPYIAVVIVGVAIACLVLIGDVKTTWSFSAFNVLIYYAITNFAALHLSPEERLYPKWLGWLGLASCLFL
AFWVEKQIWLVGLGLILIGLIWHSLIHRFITD

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI181337167, Length=357, Percent_Identity=25.4901960784314, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI114326544, Length=432, Percent_Identity=23.6111111111111, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI114326550, Length=432, Percent_Identity=23.6111111111111, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI258614005, Length=418, Percent_Identity=24.4019138755981, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI258614003, Length=418, Percent_Identity=24.1626794258373, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI258645169, Length=418, Percent_Identity=24.1626794258373, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI4507047, Length=426, Percent_Identity=24.4131455399061, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI187423910, Length=387, Percent_Identity=25.0645994832041, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI7657591, Length=387, Percent_Identity=25.0645994832041, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI7657683, Length=319, Percent_Identity=23.8244514106583, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI186910308, Length=445, Percent_Identity=22.0224719101124, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI186910306, Length=445, Percent_Identity=22.0224719101124, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI186910304, Length=445, Percent_Identity=22.0224719101124, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI33286428, Length=413, Percent_Identity=24.9394673123487, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI110347453, Length=357, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI71999149, Length=348, Percent_Identity=26.1494252873563, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI115648063, Length=396, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI115648022, Length=396, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI87081869, Length=396, Percent_Identity=24.2424242424242, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786694, Length=333, Percent_Identity=27.3273273273273, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082023, Length=448, Percent_Identity=23.6607142857143, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786302, Length=387, Percent_Identity=23.2558139534884, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786789, Length=359, Percent_Identity=23.3983286908078, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081915, Length=365, Percent_Identity=22.7397260273973, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=402, Percent_Identity=24.3781094527363, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17531343, Length=391, Percent_Identity=26.3427109974425, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17533459, Length=413, Percent_Identity=23.9709443099274, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24667468, Length=405, Percent_Identity=26.9135802469136, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24668806, Length=414, Percent_Identity=25.1207729468599, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI21356285, Length=414, Percent_Identity=25.1207729468599, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24668802, Length=414, Percent_Identity=25.1207729468599, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI221512776, Length=409, Percent_Identity=22.2493887530562, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24666159, Length=409, Percent_Identity=22.2493887530562, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281366235, Length=369, Percent_Identity=24.9322493224932, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007820, Length=369, Percent_Identity=24.9322493224932, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007818, Length=369, Percent_Identity=24.9322493224932, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85725152, Length=369, Percent_Identity=24.9322493224932, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161077963, Length=374, Percent_Identity=24.5989304812834, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24651635, Length=341, Percent_Identity=22.5806451612903, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651633, Length=341, Percent_Identity=22.5806451612903, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357367, Length=360, Percent_Identity=23.8888888888889, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221331183, Length=366, Percent_Identity=25.4098360655738, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647653, Length=366, Percent_Identity=25.4098360655738, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24664379, Length=366, Percent_Identity=25.4098360655738, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46122; Mature: 45990

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCC
>Mature Secondary Structure 
ASTPQLRREIGVFGATLMGNGSILGTGVFVSIGIAASIAGPSVIIAVAVAGVVATCNAF
CCCHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
NSAQLAANHPVSGGTYEYGYKYLNNWLGFIAGWMFLFAKSASAATAALGFAGYFLNAFGV
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
NNNTWLVLTALTAVVVLTIVVLSGIRRSNVTNIIIVSITLFSLVLFILAGVPQVVFSEGK
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
NLMPFFPGDKPIASLLQATALMFVAYTGYGRIATLGEEVKEPRRTIPRAIALTMIFTCVL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YISTAIVSVFAGQEVIQKLSQADVSLVAPLEVIAKVGGLGIPVIPKLIAIGAITAMLGVL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LNLILGLSRVLLAMGRRRDVPKVVARLDSGQTTPYIAVVIVGVAIACLVLIGDVKTTWSF
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
SAFNVLIYYAITNFAALHLSPEERLYPKWLGWLGLASCLFLAFWVEKQIWLVGLGLILIG
HHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIWHSLIHRFITD
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]