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The map label for this gene is 113473983

Identifier: 113473983

GI number: 113473983

Start: 81365

End: 81982

Strand: Reverse

Name: 113473983

Synonym: Tery_0058

Alternate gene names: NA

Gene position: 81982-81365 (Counterclockwise)

Preceding gene: 113473984

Following gene: 113473979

Centisome position: 1.06

GC content: 33.01

Gene sequence:

>618_bases
ATGTACAGACGTTGCATACAACTTACCTCTCTATTCCTAATTCCTAACCTCAGCCATAATACTTCTCTATTGATCTCATT
TTTTTCTATTAACTCAAAAAATGCTGTCATGGCTAAAATCAAACTCAAAATATTAATAATAAATCTATTAGTTTCACTAG
CTTTTGCCAAACCTGTAGTTGCATACATAAAGTGGCAAGCACAAACTTTAAAACGCTCAAGAGAATGTTTTTATTGTGAT
CTTTCCAAGATTAACCTCAGTAATTCTAATTATAAAAAAATGAATGTAACTGGTTCAGTATTACAGAATGCTGACTTCTC
TAATACAAATCTTGAAAAAGCCAATTTTACCAATACAGATTTAACAGAAGCAGAATTCGACAGTGCCAACTTACAAGAAG
CTAACTTACAGAGATCTATCCTCAAGAGAACAAACTTTTGGGGAGCAAATCTCCAGAAGGCAAATTTACGCGGAGCTGAT
TTAACAGAAACTATTTTTTGGAATGCTGATTTAAGAGACGCAGATTTGCGGGATACTAATATAAATAATGCCAGCTTTAT
TGATGCTCAACTAAAAGGTGCAATTTTACCCGATGGTACTGTATATCCTTACAAATAA

Upstream 100 bases:

>100_bases
TACTTCTCTAAAGCTTATGTACTTCCTGCTTCTTTTGCTTTGAGTAAGTTTAACAGAACGGTAATTCTTCCAATTACACC
CTAATTTAATTCCCTTTTCT

Downstream 100 bases:

>100_bases
TCATTGTTAGTAAATGTATAATTTTTGTTTTTTTCCAGAGTAATATTTTTTCTGTTTATCGTGATTATCTTGCCTATATC
TATTCTGTTATTTACTATTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYRRCIQLTSLFLIPNLSHNTSLLISFFSINSKNAVMAKIKLKILIINLLVSLAFAKPVVAYIKWQAQTLKRSRECFYCD
LSKINLSNSNYKKMNVTGSVLQNADFSNTNLEKANFTNTDLTEAEFDSANLQEANLQRSILKRTNFWGANLQKANLRGAD
LTETIFWNADLRDADLRDTNINNASFIDAQLKGAILPDGTVYPYK

Sequences:

>Translated_205_residues
MYRRCIQLTSLFLIPNLSHNTSLLISFFSINSKNAVMAKIKLKILIINLLVSLAFAKPVVAYIKWQAQTLKRSRECFYCD
LSKINLSNSNYKKMNVTGSVLQNADFSNTNLEKANFTNTDLTEAEFDSANLQEANLQRSILKRTNFWGANLQKANLRGAD
LTETIFWNADLRDADLRDTNINNASFIDAQLKGAILPDGTVYPYK
>Mature_205_residues
MYRRCIQLTSLFLIPNLSHNTSLLISFFSINSKNAVMAKIKLKILIINLLVSLAFAKPVVAYIKWQAQTLKRSRECFYCD
LSKINLSNSNYKKMNVTGSVLQNADFSNTNLEKANFTNTDLTEAEFDSANLQEANLQRSILKRTNFWGANLQKANLRGAD
LTETIFWNADLRDADLRDTNINNASFIDAQLKGAILPDGTVYPYK

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23212; Mature: 23212

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRCIQLTSLFLIPNLSHNTSLLISFFSINSKNAVMAKIKLKILIINLLVSLAFAKPVV
CCHHHHHHHHHHEECCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
AYIKWQAQTLKRSRECFYCDLSKINLSNSNYKKMNVTGSVLQNADFSNTNLEKANFTNTD
HHHHHHHHHHHCCCCEEEEECEEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
LTEAEFDSANLQEANLQRSILKRTNFWGANLQKANLRGADLTETIFWNADLRDADLRDTN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCC
INNASFIDAQLKGAILPDGTVYPYK
CCCCEEEEHEECCEECCCCCCCCCC
>Mature Secondary Structure
MYRRCIQLTSLFLIPNLSHNTSLLISFFSINSKNAVMAKIKLKILIINLLVSLAFAKPVV
CCHHHHHHHHHHEECCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
AYIKWQAQTLKRSRECFYCDLSKINLSNSNYKKMNVTGSVLQNADFSNTNLEKANFTNTD
HHHHHHHHHHHCCCCEEEEECEEEECCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCC
LTEAEFDSANLQEANLQRSILKRTNFWGANLQKANLRGADLTETIFWNADLRDADLRDTN
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCC
INNASFIDAQLKGAILPDGTVYPYK
CCCCEEEEHEECCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA