Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113473976

Identifier: 113473976

GI number: 113473976

Start: 73445

End: 73846

Strand: Reverse

Name: 113473976

Synonym: Tery_0049

Alternate gene names: NA

Gene position: 73846-73445 (Counterclockwise)

Preceding gene: 113473979

Following gene: 113473973

Centisome position: 0.95

GC content: 27.61

Gene sequence:

>402_bases
ATGTATAAAGTCTCCCAAATGAATCCAACTTTAGAATATATTTATAATCATCCAAAAGAAACAAAAAGAATTATTGGCAT
TACTTATGAACAGCTAATAAAATTAATAGCAAAGGCCCAAGTAATAGAATCAGAGAAAAAGGAGGCGATCGCCAAAACAG
AAAAAAGATTAATTAAAGCAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAAGAAGAAATAATTTTAACGTTATTTTAT
TTACATCAAATACCAACTTTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTA
CTGGATAGATATTCTCAGAGAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAAAAAAGAAAATGAATTGGAATGGGT
AA

Upstream 100 bases:

>100_bases
CCTAAATGGCTTAATGCTTCACTTTGGGTGTTAGGGTTGGAGATTTTCTTCATTAAACATCTCCAAAATAGAAAATAAGG
TAAAATTATCAAAACCATTT

Downstream 100 bases:

>100_bases
AGGAGATATTAACAGAATTATAATTAATTGTAGATAGTACAGAACAAAGTATAGAAAGACCAAGTGAATATAAAGACCAA
GAAAAATATCAAATATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG

Sequences:

>Translated_133_residues
MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG
>Mature_133_residues
MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFY
LHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKKMNWNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15506; Mature: 15506

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKA
CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGVRKKNLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASL
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQVKKKKMNWNG
HHHHHHHCCCCCC
>Mature Secondary Structure
MYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQVIESEKKEAIAKTEKRLIKA
CCCCCCCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGVRKKNLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASL
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEQVKKKKMNWNG
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA