| Definition | Rhodococcus jostii RHA1 chromosome, complete genome. |
|---|---|
| Accession | NC_008268 |
| Length | 7,804,765 |
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Identifier: 111021995
GI number:
Start: 5312569
End: 5315853
Strand: Reverse
Name: Not Available
Synonym: RHA1_ro05028
Alternate gene names: NA
Gene position: NA
Preceding gene: 111021997
Following gene: 111021994
Centisome position: NA
GC content: NA
Gene sequence:
>3285_bases ATGCTGCGTATTCGAGTACTCGGAACGCTCGAGGCGGAGGACGAATCGGGGACGGTGGACCTCGGCGGCCCCCGCCAGCG CGCCGTGCTCGCGCTACTGCTCGTCGCGCACGGCGAGGTGGTGCCGGTGGATCGGCTCATCGACGACCTCTGGCACGGCG CTCCCCCACCGCGAGCGGTCGGCGCACTTCAGGCATACATTTCGAATCTGCGGCGCGCGCTGGAGCCGCACCGCGCGCCC CGGGCGGACTCCACCGTCCTGGTGAGCCGGGCCCCGGGTTACGCGCTCATCCTGCCCCCGTCCGGTGTGGATGCGTGGGA ATTCGAGACCCTGATCCGGTCGGCCGCCGATACCGGGCGCGCAGATCTCGAACACGCGCTGAGCCTGTGGCGGGGGCCGG CGTTCGCCGAGGTGGCCGGTGAGCACTGGGCTCTCGCCGAGATCGCCCGGCTCGAGGAACTGCGGGTGGTCGCGCGCGAA CGTCTGGTGGCGGCGGCCGTCGCGAGCGGGGATGCGGCCGGCGCCGTGCTCGACGCGCAGGCCCTCACCCGGGACCACCC GCTCCGGGAAGAGGGGTGGCGATTGCTCGCCCTGGCCTTGCACCGCAGTGGGAGACAGGCCGACGCCCTGGCCGCGTTGC GCGAGGCCCGCGGCCGGCTGGCGAACGAACTCGGCCTCGACCCCGGTGCCGCCCTGACCGAACTCGAACGACAGATCCTC ACCGGCACGGTCCCGTCTCCACCCGCACCCGCCCCCGCAGCCGGGCGGGTCGACACGACGCCGGAAACCTGGTTCCTCGG CCGCACCGAGGAATTGGCGAGCCTGACCGACCTGATGACCGACGCCGGCACCCCCGTCGTCCTCCTCGGGGGCGACGCCG GATCGGGGAAGTCGTCCCTGCTGCGCCGGTTCCGTCGAACACTGCACGCCGCGGGGTGGCAGGTGGCGGTGGGTCGCTGC CCCGAAGTGGACGGCGCCCCACCCGCCTGGGCGTGGGTGGAGATCCTGCGCGCGCTGCGCGAGACGGTCGACCCCGGCGC CGAGACCGACGCGCTGGCACCCCTGCTCTCCGACGACCGTTCGCGCGCGGCGCGGCCGGACGATCCGAGCGGACGGTTCC TGCTGCACCGCGCCGTCGCCGACTACATCGGCACCGTCCGCGATCACGGCCCTCTCGCCGTCGTCCTCGACGACGTCCAC CGCGCCGACGAGGACACCCTGTCGATCCTCGTGCGGCTCGCGCAGCAGCGGCACCCGATCCTGCTGCTCCTCGCATTCCG CCCGGACGAGGTGGACCCGAACCTGGAGAGCTGCTTCGCCGATCTCGCATCGCTACAACCGACCCGCATCCGCCTCGGCG GACTCGGCCCCGACGATTCGGCTGAGCTGATCCGGCATGTGGCGGGACGCGACCCCGATCCCGGCACCCTCCGCGCGCTC GCCGACCGGACCGGTGGAAACCCGTTCTACCTGCAGGAGAGCGCCCGACTCCTGGCCAGTGAGGGCGAGCTGGTGGCCAC GTCGGAGGTGCCCGAGGGGGTCCGGGACGTCCTGCGCAGGCGGATCGCCCGTCTCCCCGAACTCGCCGTGTCCGTCCTGC GGCTGGCCGCGGTCGTGGGCCGCGAATCCGACATCGACGTCCTCACCCGCGCCGCCGAGGTCGACGAGGACACCGTGTTC GACGCCCTCGAGTCGGGCGTGATCGCCGGTCTTCTCGGCGAGCCGCGCGCCGGGACGGTCCGGTTCACGCACGCCCTCGT CCGCGACACGCTCTACTCCGACCTCACCCGGCTGCGCAGGAGCCGCTGGCATGCCCGGGTCGGGACGGCACTCGAGGAGT TGCGGCCGCACGATGTCGCGGCACTCGCCCACCATTTCACCGAGGCGCTGTCGGCCGCCACCGCACGGCAGGCCCTCGAC CACAATGTCGCGGCCGCGGCGCAGGCCGCCGACCGCTACGCCCACGACGCGGAGATCGGCTTCCTCGACAACGCCCTTCG AGCGGCCGACCGGTTGCCGCCGGACGCGGCGGCGTCCGTGGACGAGCGCGTCGAAATCCTCACCGAGCTCAGTCGCACGC AACTCGCCGCCGGCATCGGACTGGCGGGATCCCGCTCACGGAACCGGGCGCTCGCCCTCGCCCGGGACGCGGGCCGCACC GACCTTGCGATCCGGGCGCTCGCGTTCGTCGACACCCCGACGCCGTGGATCAATCGGCGATACGGCGAAGTGGACGCGGC CGTCGTCGATCAGATCGAGGCGTTGCTGCGGGACGAGGTACTGGAACCTGCGGTGCGGTGCCGGCTGCTGGTCACCCTCG TCCACGAGATCGGGGCGGAGGATCACGAGCGCACCGGTTCCGCGGTCCGGGAGGCCGAGGCTCTCGCCCGTGACCTGGAC GATCCGGTGCTGCTCGGGCTGGTGCTCTGCGCCGTCCATGCAGGCACCGGTTCCCCGACCAGCACGCTCGGCCACCACGT CATCGGCGACGAGCTGCTCCAGATCGGTGACCGGACACAGCTCCCCGTGTTCACCATGCTCGGCCACCACCTGCTGGCCG AGATCGCGTCCGGCAACGGTGACATCCCGGCGATCGAACATCACATGGGCATCCAGTCGGAGCTGGCGGACCGGTATCAG TTCCAGCAGGCGCAGGCCACCCGGGAGATGAGCCGCGCGATGGTCGCACACCTCACCGGCGATCTGGCCACGGCGGAACG ACACTACGTGCGCGGCCACGAGCTGATGACCAGGGCGGGCCTCGACGCGGACAGCGTCTTCGCGCTCGCGCTGTTCACGC TCCGGCTCACCGAGGGACGCGCCGGAGAACTCGAGGCGGTGATCGAGACCGTCGACAGTGCGGCGATGGACGTGATCGCC GATCTGCACGCCCTCGCACTCCTCGGCAACGGCAAACCGGACCGGGCGCGGGAGGTCCGGCGTCACCTCCGCCCTGTCCG CCGCGACTTCTTCCATTCCCTGATGATGTCGCTGCGGGGCATCGTCGTCGCGGGTCTGGGTGAGCGGGACGAGGCGCCTT CGGTGCACGCGGAGCTGAGCCCGTACAGCGGCCAGATCGGCGGCGGCGACACGGCGGCGTTCGCGGTCGGCCCCGTCGAC ACCATTCTCGGCGACCTCGAGATGCTCCTCCGCCGCCCCGACGACGCCCGCAGGCACTACGCGGCGGCACTCGAACTGGC CGAACGCTGCGGTTGCCCGGCGTGGGTGGAGGCCGCGCGCACCCGGGTGACGACCCGCCCAAGCGAGTTCCAAGTGGGCC ACTAG
Upstream 100 bases:
>100_bases GGGACGGACTGTGTGAGCAGTTGACGTAGTCATGCACTCAGGGTCGGTTCGGCGTCTTGGAGAGGACTTGGAGGCCACTA GTGCTTACGCTGGCTGAACG
Downstream 100 bases:
>100_bases CCGCCGGGCGCAGAGTCGGAGGCGACAGAACCAACCGGCTTTCCTGGAGGCTCCCCATGAGTTCCCTGCTCGCGCGCCTC GGCTCGGCTGCCGCCACCCG
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1094_residues MLRIRVLGTLEAEDESGTVDLGGPRQRAVLALLLVAHGEVVPVDRLIDDLWHGAPPPRAVGALQAYISNLRRALEPHRAP RADSTVLVSRAPGYALILPPSGVDAWEFETLIRSAADTGRADLEHALSLWRGPAFAEVAGEHWALAEIARLEELRVVARE RLVAAAVASGDAAGAVLDAQALTRDHPLREEGWRLLALALHRSGRQADALAALREARGRLANELGLDPGAALTELERQIL TGTVPSPPAPAPAAGRVDTTPETWFLGRTEELASLTDLMTDAGTPVVLLGGDAGSGKSSLLRRFRRTLHAAGWQVAVGRC PEVDGAPPAWAWVEILRALRETVDPGAETDALAPLLSDDRSRAARPDDPSGRFLLHRAVADYIGTVRDHGPLAVVLDDVH RADEDTLSILVRLAQQRHPILLLLAFRPDEVDPNLESCFADLASLQPTRIRLGGLGPDDSAELIRHVAGRDPDPGTLRAL ADRTGGNPFYLQESARLLASEGELVATSEVPEGVRDVLRRRIARLPELAVSVLRLAAVVGRESDIDVLTRAAEVDEDTVF DALESGVIAGLLGEPRAGTVRFTHALVRDTLYSDLTRLRRSRWHARVGTALEELRPHDVAALAHHFTEALSAATARQALD HNVAAAAQAADRYAHDAEIGFLDNALRAADRLPPDAAASVDERVEILTELSRTQLAAGIGLAGSRSRNRALALARDAGRT DLAIRALAFVDTPTPWINRRYGEVDAAVVDQIEALLRDEVLEPAVRCRLLVTLVHEIGAEDHERTGSAVREAEALARDLD DPVLLGLVLCAVHAGTGSPTSTLGHHVIGDELLQIGDRTQLPVFTMLGHHLLAEIASGNGDIPAIEHHMGIQSELADRYQ FQQAQATREMSRAMVAHLTGDLATAERHYVRGHELMTRAGLDADSVFALALFTLRLTEGRAGELEAVIETVDSAAMDVIA DLHALALLGNGKPDRAREVRRHLRPVRRDFFHSLMMSLRGIVVAGLGERDEAPSVHAELSPYSGQIGGGDTAAFAVGPVD TILGDLEMLLRRPDDARRHYAAALELAERCGCPAWVEAARTRVTTRPSEFQVGH
Sequences:
NA
Specific function: NA
COG id: COG3629
COG function: function code T; DNA-binding transcriptional activator of the SARP family
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA