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The map label for this gene is rpoC

Identifier: 111018958

GI number:

Start: 2077190

End: 2081146

Strand: Reverse

Name: rpoC

Synonym: RHA1_ro01961

Alternate gene names: NA

Gene position: NA

Preceding gene: 111018959

Following gene: 111018957

Centisome position: NA

GC content: NA

Gene sequence:

>3957_bases
GTGCTCGACGTCAACTTCTTCGATGAACTCCGCATTGGCCTCGCCAGTGCAGAGGACATCCGCAATTGGTCCTACGGTGA
GGTCAAGAAGCCGGAGACCATCAACTACCGCACCCTCAAGCCCGAGAAGGACGGCCTCTTCTGCGAGAAGATCTTCGGCC
CCACCCGGGACTGGGAGTGCTACTGCGGTAAGTACAAGCGTGTCCGCTTCAAGGGCATCATCTGTGAGCGCTGCGGCGTC
GAGGTGACCCGCGCCAAGGTTCGGCGTGAGCGCATGGGCCACATCGAACTGGCCGCCCCGGTCACGCACATCTGGTACTT
CAAGGGCGTGCCCAGCCGTCTCGGCTACCTGCTCGACCTGGCGCCGAAGGATCTCGAAAAGATCATCTACTTCGCCGCGT
ACGTCATCGTCGGTGTCGACGAGGAACTGCGTCACAACGAGCTGTCCACTCTCGAAGCCGAGATGCAGGTCGAGAAGAAG
TCCGTCGCGGATCAGCGTGACGCCGACCTCGAGGCCCGCGCGCAGAAGCTCGAAGCCGACATCGCCGAGTTGGAGGCGGA
GGGCGCCAAGTCCGACGTCCGCCGCAAGGTCAAGGACGGCGGCGAGCGCGAGATGCGTCAGCTCCGTGACCGCGCGCAGC
GTGAGCTGGACCGTCTCGACGAGATCTGGACCACGTTCACCAAGCTCAGTGTCAAGCAGCTCATCGTCGACGAACTGCTG
TACCGCGAGCTCGTCGACCGCTACGGCGAGTACTTCACGGGCGCCATGGGTGCCGAGTCGATCCAGAAGCTCATGGAGAA
CTTCGACATCGACGCCGAGGCCGAGAACCTCCGCGAGACCATCCGCAGCGGCAAGGGGCAGAAGAAGCTCCGTGCGCTGA
AGCGTCTCAAGGTCGTCGCAGCCTTCCAGACCAACCAGAACTCGCCCATGGGCATGGTTCTGAACGCCGTCCCGGTGATC
CCGCCGGAGCTGCGTCCGATGGTTCAGCTCGACGGTGGCCGTTTCGCCACCTCCGACCTGAACGACCTGTACCGCCGCGT
GATCAACCGCAACAACCGCCTCAAGCGACTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGGATGC
TGCAGGAGTCCGTGGACGCGCTGTTCGACAACGGCCGTCGTGGCCGCCCCGTCACGGGTCCCGGTAACCGTCCGCTGAAG
TCCCTGAGCGACCTGCTCAAGGGCAAGCAGGGTCGTTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGTCG
TTCCGTCATCGTCGTCGGTCCGCAGCTCAAGCTGCACCAGTGCGGTCTGCCGAAGCTGATGGCTCTCGAGCTGTTCAAGC
CGTTCGTGATGAAGCGTCTGGTCGACCTGAACCACGCGCAGAACATCAAGTCCGCCAAGCGCATGGTGGAACGTCAGCGC
GCACAGGTGTGGGACGTCCTCGAAGAGGTCATCGCCGAGCACCCCGTGCTGCTGAACCGTGCACCGACGCTGCACCGCCT
GGGCATCCAGGCCTTCGAGCCGCAGCTGGTCGAGGGTAAGGCCATTCAGCTCCACCCGCTGGTGTGTGAGGCCTTCAACG
CCGACTTCGACGGTGACCAGATGGCCGTGCACCTTCCGCTGTCCGCGGAGGCGCAGGCCGAGGCTCGCATCCTGATGCTG
TCGTCGAACAACATCCTGTCGCCCGCGTCGGGTCGACCGCTCGCCATGCCCCGTCTGGACATGGTCACCGGTCTGTACCA
CCTGACCCGGTTGGACGAGGGTGCGATCGGCGAGCTCGCAGCGTCGACCAGCGACGAGGCGGAGCAGGGCGTGTACTCCT
CGCCTGCCGAGGCTCAGATGGCCGTCGATCGTGGCGCGCTCGTCGTGCAGGCGAAGATCAAGGTGCGGCTCACGCAGCAG
CGCCCGCCCCGCGACATCGAGTCGGAGCTGTTCCCCGAAGGCTGGAACTACGGTGACGGCTGGACCGCGGAGACGACGCT
GGGTCGCGTGCTCTTCAACGAGCTGCTGCCCGCGGACTACCCGTTCGTCAACGAGCAGATGCCGAAGAAGCGTCAGGCGA
CGATCATCAACGATCTCGCCGAGCGCTACCCCATGATCGTGGTCGCGCAGACCGTCGACAAGCTGAAGGACGCCGGTTTC
TACTGGGCCACGCGTTCCGGTGTCACGGTCTCGATCTCCGACGTCCTCGTGCCGCCGGAGAAGGCTCAGATCATGGAGTC
CTTCGAGGCTCAGGCCGACCAGATCGAGAAGAAGTACCAGCGTGGTGCTCTGAATAAGACCGAGCGCAACAGCGCCCTGG
TCAAGATCTGGTCCGAGGCCACCGACGAGGTCGGTAAGGCCATGGAGGCCCACTTCCCCGACGACAACCCGATCCCGATG
ATCGTGAAGTCCGGCGCCGCCGGCAACATGACTCAGGTTCGTTCGCTCGCCGGCATGAAGGGTCTGGTGACCAACCCGAA
GGGTGAGTTCATCCCGCGTCCGATCAAGTCTTCCTTCAAGGAAGGCCTGACCGTTCTCGAGTACTTCATCAACACGCACG
GTGCCCGTAAGGGTCTGGCCGACACCGCGCTCCGCACCGCCGACTCGGGTTACCTGACCCGTCGTCTGGTGGACGTCTCG
CAGGACGTCATCGTCCGCGAGGTCGACTGTGGAACCGAGCGCGGCATCGTCACCACGATCGCCGAGAAGCAGGCCGACGG
CACGCTTATCCGCGATGCACACGTGGAGACGAGCACGTACGCCCGCACCCTGGCCGCCGACGCGGTCGACGAGAACGGCA
ACGTCATCGTCGAGCGTGGACACGACCTGGGCGACCCGGCTATCGACGCGCTGCTCGAGGCAGGCATCACGCAGGTCAAG
GTCCGCTCGGTGCTCACCTGCACCACCGGCACCGGCGTCTGCGCCACCTGCTACGGCCGCTCCATGGCCACCGGCAAGCT
CGTCGACATCGGTGAGGCCGTCGGTATCGTCGCCGCACAGTCCATCGGTGAGCCCGGTACCCAGCTGACCATGCGTACGT
TCCACCAGGGTGGTGTCGCCGGAGACGACATCACCGGTGGTCTGCCGCGTGTTCAGGAGCTGTTCGAGGCCCGCGTCCCC
AAGGGCAAGGCCCCGATCGCCGACGTCAGTGGCCGCGTGCAGCTCGAGGACGGCGACCGCTTCTACAAGATCACCATCGT
CCCGGACGACGGTGGCGAAGAGGTTGTCTACGACAAGCTCTCGAAGCGTCAGCGTCTGCGTGTCTTCAAGCACGACGACG
GCACCGAACGCCTTCTGGCCGACGGTGACCACGTCGAGGTCGGTCAGCAGCTAATGGAAGGTGCTGCCGATCCGCACGAG
GTGCTGCGTGTCATGGGCCCCCGTCAGGTGCAGATCCACCTCGTCAACGAGGTCCAGGAGGTGTACCGGAGCCAGGGTGT
GTCGATCCACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGTCGCGTGACGATCATCGACTCGGGCGCCACGG
AGTTCCTGCCCGGTTCGCTGACGGAGCGTGCGGACTTCGAAGCGGCCAACCGCCGTGTCGTCGCCGAGGGTGGTGAGCCG
GCCGCCGGACGTCCGGTGCTGATGGGTATCACCAAGGCATCGCTGGCGACCGATTCGTGGCTGTCCGCGGCGTCGTTCCA
GGAGACCACTCGCGTCTTGACCGATGCGGCGATCAACTGCCGCTCGGACAAGCTGATCGGTCTGAAGGAAAACGTGATCA
TCGGAAAGCTGATCCCTGCCGGTACCGGTATCAACCGTTACCGCAACATCCAGGTTCAGCCGACCGAAGAGGCCCGCGCT
GCTGCGTACGCGGTTCCGTCCTACGACGACCAGTACTACAGCCCGGACGGCTTCGGCCAGAACACCGGTGCCGCGGTGCC
GCTGGACGATTACGGTTTCAGCAACGATTACCGGTAG

Upstream 100 bases:

>100_bases
TGAGAAATCAGGGTCCGGGGGCGTAGTTCACATTTGAATTGGCAGTCAGGAATCGGCGGGCGACCGTTGATCCACAATCC
CTCTGGGGAAAGGAAGTTAC

Downstream 100 bases:

>100_bases
GCGCTCCGCGCCCGTGAGCGGTTGACGAGTCCCAGGACTCGCCGAGCACTCACCAACGACGAAGGCCCCACCCCACTCTC
TTCGGGGGTGGGGCCTTCAT

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1318_residues
MLDVNFFDELRIGLASAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGV
EVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMQVEKK
SVADQRDADLEARAQKLEADIAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTTFTKLSVKQLIVDELL
YRELVDRYGEYFTGAMGAESIQKLMENFDIDAEAENLRETIRSGKGQKKLRALKRLKVVAAFQTNQNSPMGMVLNAVPVI
PPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLK
SLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQAEARILML
SSNNILSPASGRPLAMPRLDMVTGLYHLTRLDEGAIGELAASTSDEAEQGVYSSPAEAQMAVDRGALVVQAKIKVRLTQQ
RPPRDIESELFPEGWNYGDGWTAETTLGRVLFNELLPADYPFVNEQMPKKRQATIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSISDVLVPPEKAQIMESFEAQADQIEKKYQRGALNKTERNSALVKIWSEATDEVGKAMEAHFPDDNPIPM
IVKSGAAGNMTQVRSLAGMKGLVTNPKGEFIPRPIKSSFKEGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVS
QDVIVREVDCGTERGIVTTIAEKQADGTLIRDAHVETSTYARTLAADAVDENGNVIVERGHDLGDPAIDALLEAGITQVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITGGLPRVQELFEARVP
KGKAPIADVSGRVQLEDGDRFYKITIVPDDGGEEVVYDKLSKRQRLRVFKHDDGTERLLADGDHVEVGQQLMEGAADPHE
VLRVMGPRQVQIHLVNEVQEVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERADFEAANRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIPAGTGINRYRNIQVQPTEEARA
AAYAVPSYDDQYYSPDGFGQNTGAAVPLDDYGFSNDYR

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA