| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
Click here to switch to the map view.
The map label for this gene is spoVD
Identifier: 261876156
GI number:
Start: 2347513
End: 2349732
Strand: Reverse
Name: spoVD
Synonym: CPF_2117
Alternate gene names: NA
Gene position: NA
Preceding gene: 110799444
Following gene: 110800485
Centisome position: NA
GC content: NA
Gene sequence:
>2220_bases GTGAAAAAGAAGAAAAACAAAGGATTTAAAGATTATAAAATAACAAAATCGCTTAGATTTGGAAGAACATATTGGACCAT GATAGTAGTATGGGGATTACTAGGAGTATTAACCTTAAGATTATCATACGTAATGATTTTTAAGCATAAAGAATATGGTT CAATGGCAGAAGAACAATGGAAAAATGAAATAAAGATAGGTGCTAAAAGAGGAGAAATACTAGATAGAAATGGAGCTCAA TTAGCTGTTAGCGCTAATGTTTATAGAGTGGATTTAGATCTTAAAACTTTAAGAGAAGATACATTTACTAAAGATGATAC AGATGATACAAAAAAAGAAAAGCTTAATAAAATTGCAGGGGAGCTAGGTACTGTTTTAGATATGCCTAAAGAAGAGGTAT ATGATAAGATAAATAGCACTTTACCATCAGGATTGCCAGCTACTTCTGTTACTTTAATTAGAAAGATAGAAAAAGATAAA GCTGATAGTGCTAAGAATTTAAAGATAAGAGGAGTAATAGTTTCACAGGATACAAAGAGATATTACCCAGATAATAATTT CTTAGCTCAAGTATTAGGAAGAGTTGATGCAGATGGTATAGGTCAAGGTGGTATAGAGCGTGAATATAATGTGGAGTTAT CAGGTTTACCAGGAATGAGAATATCAGAAGTTGCAAGAAATAGTAGTGGAATACCTTATTCAAATTCTGAATTTGCAAAG CCTGTGGATGGTAAAGATGTCACACTAACCGTTGATGAAACTATACAATATTTTGCAGAAAAAGTTGCAGAAGAAGGAAA AAAAGAATATAAAGCAGATGGGGTTAGTATAATAGTTATGAATCCTAAAAATGGAGAAATATTAGCTATGGCTAATAAAC CAGATTATAATCCTAATGAACCTTATAAAGGGTATGAAAATTTCCCTGGTAAAGATAAAACTGAAAAGATGGAAAATATG TGGAAAAATGATGCCGTATCAAATTCATTTGAGCCAGGATCTATATTTAAAATGGTAACATCTTCAGCTGCCGTACAAGA AGGGATAGCAGGTGGAAATGAAACATATTTTTGTCCAGGTGGAAAAAATGTATCTGGAACTTATATAAAATGTTGGAAGC CAGATGGGCATGGAACTGAAACTTTTGACCAGATATTAGAAAACTCTTGTAACGTTGGGTTTATGGACATAGGTCAAAAA CTTGGAAAAGAAAAATTAAATGAATATATAGAAAAGTTTGGATTTGGTAAGCAGACAGGAATAGATTTACCTGGAGAAAC AACAGGTATAGTATTGCCAAATGATAAAATAGGTCCAGTAGAACTTGCAACCATATCATTTGGTCAAACAGATAGTGCTA GTTCAGTTCAAATGATGGCAGCTATGAACACAATTGCTAATGGAGGAACATGGATACAACCTCATATAATGAAGGAAATA AGCCATGAAGATACAAGTGGAGCAAGAGTAGTGGATAAAACTTTTGTACCTAAAAAGATTGATAATATAATAGATCAAAA AACAGCTATGAGAGTTTCAGAGGCTCTAGAAAAAACTGTTCATTTTGGATCTCCTAAGAGAGCTTATATAGAGGGATATG GAATTGCAGGTAAAACTGGTACAGCTGAAAAGGTTAAGGCTAGTGGAGGATATGGTGCAGGGTATGTAGCGTCCTTTGCT GGATTTGCTCCATATAATGATCCACAAGTTTCAGTTTTAATATCTGTAGATAATCCAAAGGGGGAATACTTTGGAGGATT AGTAGCGGCACCATTAGCTCATGATTTATTTAGTGATATATTTAACTATATGGAATTAGATAGTTCAAAGATAGACAAAA ATAAATCAAAAGAAGAGATTCTGCCAGAAGTTAGAGGTATGAGTTTAGATAAGGCTAAAGCTATTTTAGATAAAGATAAT ATAAAATATTCTGTAGAAGATGGTGGGAATTCTGTAGTTGATATGAATCCTAAGCCGGGATATACAATCAAAGAGGGAGA TGAAATTAAACTTTACACTAAAACTACTTCAAATTATAATAAAGATGTTGTAGTACCAGATTTTAATGGACTTTCCATGG AAAAAGCAAAGGAAATTTTAAACAAAATTGGCTTAAAGGGTACTTTTGCAGGAGAGGGAGTTATTAAGGAACAAAGTGTA GCTCAAGGTGATGTAGTTAAAAGTGGTACATCAATAGAATTTAAATTAGATAAGAAATAA
Upstream 100 bases:
>100_bases TAATTAGATAATATGATAAATTTAGTAGAACTTTAAAGTTTCATAAAGTGAATTTCAAAGAGGGAACTCAGTTTATTTAA CTTACTACGGAGGGCTAAGG
Downstream 100 bases:
>100_bases TGATAGTTAAAAACTAGCATGTGAGTAATTTCACATGCTAGTATTTTGTGAATTTAACGCTTGTTTATTGCATAGTATTT AAGGAGTGAGAAAAATGATT
Product: stage V sporulation protein D
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>739_residues MKKKKNKGFKDYKITKSLRFGRTYWTMIVVWGLLGVLTLRLSYVMIFKHKEYGSMAEEQWKNEIKIGAKRGEILDRNGAQ LAVSANVYRVDLDLKTLREDTFTKDDTDDTKKEKLNKIAGELGTVLDMPKEEVYDKINSTLPSGLPATSVTLIRKIEKDK ADSAKNLKIRGVIVSQDTKRYYPDNNFLAQVLGRVDADGIGQGGIEREYNVELSGLPGMRISEVARNSSGIPYSNSEFAK PVDGKDVTLTVDETIQYFAEKVAEEGKKEYKADGVSIIVMNPKNGEILAMANKPDYNPNEPYKGYENFPGKDKTEKMENM WKNDAVSNSFEPGSIFKMVTSSAAVQEGIAGGNETYFCPGGKNVSGTYIKCWKPDGHGTETFDQILENSCNVGFMDIGQK LGKEKLNEYIEKFGFGKQTGIDLPGETTGIVLPNDKIGPVELATISFGQTDSASSVQMMAAMNTIANGGTWIQPHIMKEI SHEDTSGARVVDKTFVPKKIDNIIDQKTAMRVSEALEKTVHFGSPKRAYIEGYGIAGKTGTAEKVKASGGYGAGYVASFA GFAPYNDPQVSVLISVDNPKGEYFGGLVAAPLAHDLFSDIFNYMELDSSKIDKNKSKEEILPEVRGMSLDKAKAILDKDN IKYSVEDGGNSVVDMNPKPGYTIKEGDEIKLYTKTTSNYNKDVVVPDFNGLSMEKAKEILNKIGLKGTFAGEGVIKEQSV AQGDVVKSGTSIEFKLDKK
Sequences:
NA
Specific function: NA
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA