Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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The map label for this gene is smc

Identifier: 110800938

GI number:

Start: 2207909

End: 2211466

Strand: Reverse

Name: smc

Synonym: CPF_1970

Alternate gene names: NA

Gene position: NA

Preceding gene: 110800781

Following gene: 110800008

Centisome position: NA

GC content: NA

Gene sequence:

>3558_bases
ATGTTTTTAAAATCTCTTGAAATAAGGGGATTTAAATCATTTGCTGATAAAACAGAATTAAATTTTAAAAAAGGAATAAC
AGCTATAGTTGGGCCTAATGGAAGTGGAAAAAGTAATGTATCAGATAGCGTAAGATGGGTTTTAGGGGAGCAAAGTGCTA
AAACCTTAAGAGGAGCTAAGATGGAAGATGTAATCTTTACTGGTACAGAATATAGAAAGCCTATAGGATATGCACAGGTT
TCTTTAACTTTAGACAATTCTTTAGGGGAACTCCCTTTAGATTATTTAGATGTAAAAGTTACTAGAAAATTATTCCGTTC
TGGAGAAAGCGAATATTTAATAAATAATTCTCCTTGTAGATTAAAAGATGTTGTAAACCTATTTATGGATACAGGAATAG
GAAAAGAAGGGTATTCGCTTATTGGTCAAGGTAAAATAGATAGTATTCTAAGTGGTAAGCCGGAAGATAGAAGAGCTATT
CTAGAGGAAGCTGCAGGTATTGTAAAGTTTAAATCTAGAAAAGGTGAAGCTGAGAAAAAGTTAAAGAATACGGAAGAAAA
CTTAGTTAGAATAAATGATATAATTTTTACTTATGAAGAAAGATTAGGTCCTTTAGAAGAGGAAAAAAATAAAGCTTTAA
GATATTTAGAGCTTTCAAATGAATTAAAGCACAAAGAAATATCATCTATTATGAGTGAATTACATAATATTGATGGGGTT
ATATTAAAGCAAAAAGAAAAGATAAAAGATTTAATAGCATTTAATGATAAGCAAAAAGAAAAGTATAAAGAAGAAAGAGA
GAAAATGTTTGCTTTAAAGGAAGAGTTAGACTCTTTAGAAGGCAGCCATTCTAAAAAGCAAGAAGAGTATTTTGTTAAAA
AGGAAGAAATAAATAAAAGCTTAGGAAAAGTAAATCTTTTAAATGAAAGAATTAAAAATATAGATGAATTAATTCTTAAA
AACAAAGAAGAGTTAGAAGAAAATAAGAAGAAATTAAATGTCTTAATGAAGGAAAAAAACTCTATAGAGAAGGATTTTAA
TTCAAATAAAAGTAAGTTTGAAAAAGAATTAGAAGAAATTAATACCTTAGAAAAAGAAGTTAATGAACTTAACTTAAAAT
TTATTTCTAAGGAAAAAGAAATTAAAAAGATAAAGGATGAGGAATTAGAACTTTTAAAAAAGGTTTCTTTATCTAAAAAT
AAAATGACAATGCTAGAAAGTGAATTGAGTAATATAAATGAAAAACTTGATTCATCAAAAAGCAAACAAGTAAATTATGA
TAATTCATTAAAAATTAATTTAGCAACTAATTTAAATCTTCAAAAAGAGCTTCAAATTATAGAAGAAGAAAAGAAAGATA
AAGAAAGAGAATTAAGGGAAAAAGAAGAAGAGTTTAGAGAAGGCTTAAAGTTAATTAAGGAAACTCAAAGTAAACTTAAT
CAAATTTTATCAAAGGTAAATAAGGTTGAAGCTAATAAAGAAATGCTAAAAAAATTAGAAAATCAATATGAAGGATACAA
CCTTTCAGTAAAGAAAATAATGGCTAGTGTAGATGCTGGACGTGTAAAAATAAATAAAAACAAATGCAAAGTTTTAGGAG
AGGTTGTGGAAACTAAGGCTGGATATGAAACTGCCATTGAAGTAGCCTTAGGTGGAAGTATTTCTAATATTATAACTGAA
GATGAGGAAGTTGCAAAAATTCTTATTAATCATCTTAGAGAAAATAAGTTAGGAAGAGCTACATTCTTACCATTATCAAT
AATAAGGGGTAAGAAGTTAGAACTTAGCAAAAACATAGTTGAAAGTGAAGGATTCTTAGGAATAGCTTCAGATTTAGTAA
ACTTTAAAGAGGTTTATAATAATGTTATAAATTATGTATTAGGTAAAACTATAATATGTGATAATATAGATAATGCCATA
AAAATTGCTAAAATGCTCAATTATAGACATAAGATTGTTACCTTATCTGGTGAGGTTGTAAATGCAGGTGGAGCACTTAC
AGGTGGTAGTCTTTATCAAAAAAACACAGGTATAATGTCTAGAAAAAATGAAGTTAAAGCTTTAGAGGATGAATTAGTTA
GGGTAAAAAATGAAGAGCACATACTAACTAAAGAATTGGAAAAGTTAAATAGAGATCAAGAAGAGTTAAGCATAAAAAAA
CAAGAAATTATAGACAAAATATATGAAAAGAATTTAGAGTTAGCAGACTTAAATAACAAGATTAAAAATGTTAATGATGA
AACTTTTAAAATAAAAAATTCTATAAAATCTTTAGAGTTAGAGCTTAAGGATATTGATTCAAGAAAGATTAAGATAGTTA
AAGAAATTGAAATTGTTAATGAAAAGATTAGTCAATTTGAAAACAAAGAAGTAACTAATTCAGAAAAGGTAAAAGAATTA
GATAAGAAACGTGAAGAACTTTCAAAAACTCTTTCTAAATATAAAGATAAGCTAACTAATATGAAAATAAATAAAGCTAA
GCTTCAAGAAGTTATTGAGGGAAGAGAAAAGGAAGCTAATAGAATAAATTCTTCTATAGAAGAAGTGGAAAATAAACTTA
TAAATATTACTAAGTACTTAGAAGAGATAAAAGCTAATAAGGAAGAAAGTAAAAAAGAAATAGTTTTATGTGAAAAGTTC
ATAAAAGAAGAGGAAGTAAATATAATTACTCTTGAAGAGAACTTTAAATCCTTTGAACTTAAAAAAGGTAAGTTAAAAGA
GACCATAAGCTCTGCTGAGAATATCTTAGAAGTTCTTTCAGTTGAAATAGCTAAAAAGGAAGAAGAAGTTCATAAAAATG
ATATAACTTATACAAAACAAGAAAATGAAAAAAATATCTTAAACAAAAGACTTCTAGAAGAATTTAATACAAGTTTTGAA
GAAGAGAAAAATAGATTTAAGCCTATTGAAGATATGAATTCTCATAAGTCAAGAATATCAACTCTTAAAGCTAGAATAAC
TGGTTTAGGAAATGTAAATGTAAATGCTATTGAAGAATTTAAAGAAATATCTGAGAAGTATAATTTTATGACAACAGAAA
GAGATGATTTAGAAAAGGCTAAGGAAGAACTTTTAAATGTTATAGAAGAAATGACATCTAAGATGAGAGTAGTCTTTAGA
CAAAATTTTAATATCTTAAATAAGCTATTTGATGAAACCTTTAAAGAATTATTTAAAGGCGGTAGTGCAAAACTTGTTTT
AGGTGAGGGTGACGAACTTACAGGAAATATAGATATAAATGTTCAACCACCAGGAAAGAAGCTTCAAAATATTAATCTTA
TGTCTGGAGGAGAGAAGGTTTTATCTGCTATAGCCTTATTATTCTCCATATTAAAGATGAAACCTACACCATTCTGTATA
TTAGATGAAATTGAGGCTGCTTTAGATGATGCCAATGTAAGAAGATATGCAGAGTTTTTAAGTAAGTTTAGAGATAATAC
TCAGTTTATAGTAATAACGCATAGAAAAGGTACTATGGAAGCTGCTGATGTTATGTATGGAGTTACTATGGAAGAGAAAG
GTATATCTAAAATTGTTTCAGTAGACTTGGAGAAATAG

Upstream 100 bases:

>100_bases
ACGAGAGACAGGGTTATAAAAATTACTATTATTTTTGTTGTAATATGCTTTTTAGCAACTTTATTACCGATTATGTTTAT
GTAAGGATAGGAGTGAATAT

Downstream 100 bases:

>100_bases
AGGAGGACAAAAAATGTTTGGAAAATTATTTGATAAATTAAAAACTGGATTAACAAAAACAAGAGATAACTTAACAGATA
AAATAAATGAGGCTTTAAAT

Product: chromosome segregation protein SMC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1185_residues
MFLKSLEIRGFKSFADKTELNFKKGITAIVGPNGSGKSNVSDSVRWVLGEQSAKTLRGAKMEDVIFTGTEYRKPIGYAQV
SLTLDNSLGELPLDYLDVKVTRKLFRSGESEYLINNSPCRLKDVVNLFMDTGIGKEGYSLIGQGKIDSILSGKPEDRRAI
LEEAAGIVKFKSRKGEAEKKLKNTEENLVRINDIIFTYEERLGPLEEEKNKALRYLELSNELKHKEISSIMSELHNIDGV
ILKQKEKIKDLIAFNDKQKEKYKEEREKMFALKEELDSLEGSHSKKQEEYFVKKEEINKSLGKVNLLNERIKNIDELILK
NKEELEENKKKLNVLMKEKNSIEKDFNSNKSKFEKELEEINTLEKEVNELNLKFISKEKEIKKIKDEELELLKKVSLSKN
KMTMLESELSNINEKLDSSKSKQVNYDNSLKINLATNLNLQKELQIIEEEKKDKERELREKEEEFREGLKLIKETQSKLN
QILSKVNKVEANKEMLKKLENQYEGYNLSVKKIMASVDAGRVKINKNKCKVLGEVVETKAGYETAIEVALGGSISNIITE
DEEVAKILINHLRENKLGRATFLPLSIIRGKKLELSKNIVESEGFLGIASDLVNFKEVYNNVINYVLGKTIICDNIDNAI
KIAKMLNYRHKIVTLSGEVVNAGGALTGGSLYQKNTGIMSRKNEVKALEDELVRVKNEEHILTKELEKLNRDQEELSIKK
QEIIDKIYEKNLELADLNNKIKNVNDETFKIKNSIKSLELELKDIDSRKIKIVKEIEIVNEKISQFENKEVTNSEKVKEL
DKKREELSKTLSKYKDKLTNMKINKAKLQEVIEGREKEANRINSSIEEVENKLINITKYLEEIKANKEESKKEIVLCEKF
IKEEEVNIITLEENFKSFELKKGKLKETISSAENILEVLSVEIAKKEEEVHKNDITYTKQENEKNILNKRLLEEFNTSFE
EEKNRFKPIEDMNSHKSRISTLKARITGLGNVNVNAIEEFKEISEKYNFMTTERDDLEKAKEELLNVIEEMTSKMRVVFR
QNFNILNKLFDETFKELFKGGSAKLVLGEGDELTGNIDINVQPPGKKLQNINLMSGGEKVLSAIALLFSILKMKPTPFCI
LDEIEAALDDANVRRYAEFLSKFRDNTQFIVITHRKGTMEAADVMYGVTMEEKGISKIVSVDLEK

Sequences:
NA

Specific function: NA

COG id: COG1196

COG function: function code D; Chromosome segregation ATPases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA