Definition Clostridium perfringens ATCC 13124, complete genome.
Accession NC_008261
Length 3,256,683

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Identifier: 110800195

GI number:

Start: 1830780

End: 1835912

Strand: Reverse

Name: Not Available

Synonym: CPF_1618

Alternate gene names: NA

Gene position: NA

Preceding gene: 110800929

Following gene: 110799376

Centisome position: NA

GC content: NA

Gene sequence:

>5133_bases
ATGAAAAAGGATTATAAGATTTTAATAACTAAAGCATTATCCTTAAGCATGGTAGGAAGTTTATTTACATCTTATCCTAC
TTTTGCTAAGGAATTTAAAGCACAAGAGGGAGACTTAATAATATCTGAATATTTACATGGACCATCTAATTCAAAGGCTA
TTGAAATATTTAATGGAACAGGGGAAGGAATAAATCTTTCTAATTATGATTTGGCTGTATATTCAAATGGAAAATATGAG
GGGAGTCCAGTTTCTCAAAGTTTAGAAGATAAGATTATAGAAAGTGGAGAGACTTATGTAATTTACAATAACCAAGGAAA
AGATGAAAAATTTACTGAGGTTATAAATGATTTAGAAAATAAATTAGGGGTAGGAAGCCAAACAGTAGGTTTCAATGGTG
ATGATGTTATATTACTTAGAAAAAATACTGGAAATGGATACGAAATAATAGACTCCTTTGGAGCTAAGACAGAAAAAGAT
AAAAAGTTTTATGATAGTAAATTCATAAGTGCTAGAAGAAAATCTGAAATAAAAGATGGTGAAAATAACATAGATAAAAC
ACCATTTGATGTTTCTATTCAATGGGATGTAGATACAGAAAATTTATATGATGATTTAGGAAAGCATGATATTTCATGGA
GTGAAGGAGAAAATCCTTCAGGAAAAGTTCTTAAGGTAAAGGAAGCAAGAAATAAAAACTTAGGAGAGGAAGTTACTACA
AGAGGTGTTGTAACTTTTAATGATAGAAATAAAACTCTTCATATACAGGATGAAACAGGAGCTATTGCAATTTCAAACTT
TAAATCAGGAGTGGATTTTGGAGCAATAACTAAGGGGAATAAGATTGAAATAAGTGGCACATTAGATAATTTTAATGGAT
TACTTCAAGTACAAGCTACTGATATAAAAGTCTTAGGAGATTTAGGAATGCCTGATCCTAAGTTAGTTACTATTAAGGAA
TTAAAAGAGTCAAATTTTGATTCTCATTATATTGAGTTGAAAAATACAGTAGTTGATTTAGAAGCTAAAACATTAACACA
AGGAGAGGATGTTTTAGATATTTACTTTATACCTTCAGGTTTAGAGGTTAAAACAGGAGATTTAGTAGATGTAAAAGGCG
TTATTGGAAGATTCAATGATAAAGTTCAACTTTATGGTTCTTCAGCAGAGTTTACAAAAATAGTTGAAGATAATGAAAGT
CCTGTAATAACTCATAAAAAAATTGAAAAGGCCAATATAAACGAAGATTTAAACATTGAAGCTAAAGTAAGTGATAATAA
TAAATTAGAAGAGGTATCTATTAGCTTTAAGGGAAAAGAGGATACTGAATTTAAAAAAGTAGTATTAAAAGAGGAAGATG
GAATATTTAAAACTTTAATACCTAAGGAAGATTTAAAAGCTTCTGGAATGGAATATTATATTAAAGCTAGTGATGGTAAA
AATATTTCAAGAGTACCAGAAAGTGGAGTATATGCTTTTCAGGTAGTAGACGAAGACTTAAGTGGACCAGAGGTTAAGAA
TGTTTTACCTAAGGAAAACTCAAGTGTAGGAGAAAACAGAAAACCTATTATAAGTGGAGAATTTATAGATAATTCTGGAG
TAAATGTAGAAAGTGTAAAAATTAAATTAGATAATGAAGACATAACTAAAGTAGCTGAAATAACAGAAACTGGTTTTTCA
TATGAGATTAAGGAAGACTTAGAGGATGGAGAACATAGAGTGGAAGTTAGTGTAAGTGATTCTTTAGGAAATAATAGGGT
GAAAGAATGGAAGTTTAGAGTAGGAAAGATAAATCATTATTATGGACAACTACATTCACATACTAATATTTCAGATGGAA
CTGGAAGCTTAGAGGATGCTTATAAATGGGCAAGAGATGAAGGTAAGGCTGATTATTTTGCCGTAACAGACCATTCAAAC
TGGTTTGATAATGATACTGAAGCTAATATAAATGATGGATCAATGAGTAAAGCTTGGACTAATGCTCAAAATATATCTGA
TAAATATAATGATGATGGTAACTTTGTTGCTATGTATGGTTATGAAATGACTTGGTCAGGATCTACTGGAGGCTGGGGAC
ATATAAATACATTTAATACTCCAGGATTTGAAACAAGAAAAAATAGTGATATGAATTTAAAAAATTATTATAATACTATT
TCTCAATTACCAGAGTCAGTTTCTCAATTAAATCATCCAGGAAAAACTTTTGGCGATTTTGCAGACTTTGGTTTTTATAG
TGAAGGGGCAGACAAGGTAGTTAATTTAATAGAGGTTGGAAATGGAGAAGGACCTGTAAGAGGTAGTGGATATTTCCCAA
GCTATGAATATTATACAAGAGCTTTAGATAAGGGATGGCATGTTGCTCCTACTAATAACCAAGATAATCATAAGGGAAAA
TGGCTTACAGCAAATGATGCTAGAACAATAATATTATCAGAAGAAAATTCAAGGGATGCTTTATATAAAGCTATGAACAA
AAAGCAAGTGTATTCTTCAGAGGATAAGAATACGACTATTGATTATACTGTTAATAATCAAATAATGGGAAGCAATTTAG
GTGAAGTAGAAGACTTAGATTTTAATATAGAAATAAATGATGAGGATAAAGAGGATACTATAAAGAAAGTTTCAATAATA
GCTAATGGTGGAGTAGAGGTCATTTCAAAGGAATTTAATAGCAATAAAGTTTCTTGGAATTTTAAGCTTAAACCTGAATA
TAGCTACTATTATGTGAAAGTAGTACAAGGAGATCAAGATATTGCAGTTACAGCTCCAGTATGGATTGGGGAAAATGTAA
ATGTAGGATTAAATGAATTAAAAACTGATAAAGATATGCTTTTAGTTGGTGACGAGGCTAAATTCTCAATAGAAGTTTAT
AATAATAGTTCTGAAAGATTAAACAATATAAAGGTTGAATTCTTCAATGGAGAAATTTCAGGTGAGAAGAAAATTGGAGA
AGAAATTATAGAAAGCTTAGAAGGAAATAGCTTAAAGGAAAGTTCTATAACATGGCAACCTGAAAGAGCAGGAGAATTTA
CTATTTATGCAAAAGCTACAATTTCAATAAATGGAACAGACAAGACATTTACTAAGAGTTCTAAGATAGAAGTTGTAAAT
GAAGGTGATGTTTATAAGGTAATGATAGATGGGGCTCATGCTAATCAATATGTAACAGGAAACTATGCAGGAAAAATAGA
TGCTTTTGAAAAGTTATTAACAGAAAATGATTGTATTCCTATAATAAACAAAGAAGAAATAACAGAGAAATCTTTAGAAA
ATGTTGACCTATTAGTTATAACTGATCCTCAAGGAATTGATGAGCCTAAGTATGAAGTTTACAAAAGTAATTTTACAGCC
TCAGAAATTGACGCAATAGGAAAATACATGGATAAGGGTGGAAATATAATCATTACATCAAGGGCAGATTATAAAGATGG
AGTTGGAGAGTATAGTAATGGTGCTCAATTAAATCCTATTTTAGAGAAGATAAATTCAGAATTAAGAGTAAATGATGACC
AAGTTGCAGATTATGAAGTTAATGAAGGACAACAATTTAGACTTATGTTAAATAAGTATTCTTCTCCTAACTTTAATCTT
GTTGAAGGATTAGGTGAAGAGGATAAATTTAGCTTCTATAGTGGATCATCAGTAGTATTAAAGGATGGAGCTAAGGGAGA
AAAGGTTGACTTCTTAGTAAGTGGTCATGAATCTACAGGAACAGATGATTCAGATAAACAAGGGGATAATGTTCCAGTAG
AAAAAGGACAAGTTAATGTTTTAGCAGTAGAAGAATTATCTAATGGAGGAAAGGTAGCCGTAGCTGGAAGTACTTTCTTC
TCAAACTTTGAAATAGATGGAACTAATGCTGAAAGTAAAAGCAATAGTAAGGTAACAAAAAATATAATAAATTGGATGTT
GCCTGAAAAAGAATTAGAAAAGCTTACTATTAAAGAATTTAGAGAAGATAAAAATAATGATGGAGAACCAGATAGATTAG
GAGAAGAGTATGTTTTAGAGGGAATAGTAACAGCTCAGTCAGAGGCTGTAGAACCTAAAAATGCTTTCTTTGAAGTTATA
TACATTCAAGATGAAACTGGTGGAATAAATGTTTTTGGTGTTTCTAATACTCCTGTAAAAGTTGGACAAAAAGTAAGAGT
TAAGGGAAGAGTAGAAGCATACCAAGGTGAATTTGAAATACAAATAAGTGATGAAAGTGCAGATTTAGAGATAATTGATG
AAAATATAAATGAAGTGAGTCCTAAAGAAATGAGCACTGGGGATAGTATGCTTCATGAAAATGAAGGATGGTTAACAAAG
GTAACAGGCAAAGTTGTTAACATGGATGATAGCAATCTTTACTTAGATGATGGTTCAGGAGTTTCAAGAATATATGTTGA
AGGATATATATGGGATGGAATAAATGAAAATATGAAAGGTAAATGGGATCCAAGAATAAAAGTTGGTGATACTGTTTCAG
CAATAGGACTTAGCTCAGAAGACCCAGAGGGCAATAGATTAAGGGTAAGAAATACTGGAGAAATTGTTCTTCAGGAAGAA
GAAAATCTTGGAGTTATAAACACTGAAATTACAAGTGATAAAAATGAAATAAAAGAAAATGAAAAAATAAGCTTATTAAC
TAAAGTAGAAAATAGCACTAAGGAAGCTTTAGAAAATTTAACTTTAAAAATCTTTGCTAACAATGGTGAAAATGAAGTTT
TATTAAAAGAAGAAAAAATAGATTCTTTAGGTGTTAATGAATCTAAGGAATTAACTTTTGAACATGCTTTTGAATTAGAG
GGTAGATATAGTATAGGAATAAAGCTTTTTGATTCTGAAGGAAATGAAATAAAAAGTAATAATAAAGAGTTTTCACTAGT
TGTTTTAAAAGAAATTAATGGTGGAGATTCTGATAATAATGGGGATGCCAATAATGGTGGAGATTCAAATAATGGATCAG
GAAATGATTCAGGTGAGGAAAATAAACCAGGCATAGATAAACCTAATACAGAGAAACCAGAAGAATTACCTAACACTGGT
AATAGAATGAATGCTAACATGCTTATGGGCTTTGGAGCTTTATACTTAGCTTTAGGATTTTATATGGTTTCTAAAAGAAA
AAAAGTAAGATAA

Upstream 100 bases:

>100_bases
AATAGGGTAAAAGATTAAAAAATGTAGTTATTACTCTATATATGTTGAAAAGAGGGGAGGGAAAATTAGCATTTAAAAAT
TTGTTTCAAGGGGGATTCAT

Downstream 100 bases:

>100_bases
ATAATTTATTAAGTTTTTAGGGCTGGCCTTCTTTAGGTCAGCCTCAATAATAAGTAAGTTAGGGTAGTAGGAGAAATATT
ATGAAAAATAGTAAAAAGAG

Product: OB-fold nucleic acid binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1710_residues
MKKDYKILITKALSLSMVGSLFTSYPTFAKEFKAQEGDLIISEYLHGPSNSKAIEIFNGTGEGINLSNYDLAVYSNGKYE
GSPVSQSLEDKIIESGETYVIYNNQGKDEKFTEVINDLENKLGVGSQTVGFNGDDVILLRKNTGNGYEIIDSFGAKTEKD
KKFYDSKFISARRKSEIKDGENNIDKTPFDVSIQWDVDTENLYDDLGKHDISWSEGENPSGKVLKVKEARNKNLGEEVTT
RGVVTFNDRNKTLHIQDETGAIAISNFKSGVDFGAITKGNKIEISGTLDNFNGLLQVQATDIKVLGDLGMPDPKLVTIKE
LKESNFDSHYIELKNTVVDLEAKTLTQGEDVLDIYFIPSGLEVKTGDLVDVKGVIGRFNDKVQLYGSSAEFTKIVEDNES
PVITHKKIEKANINEDLNIEAKVSDNNKLEEVSISFKGKEDTEFKKVVLKEEDGIFKTLIPKEDLKASGMEYYIKASDGK
NISRVPESGVYAFQVVDEDLSGPEVKNVLPKENSSVGENRKPIISGEFIDNSGVNVESVKIKLDNEDITKVAEITETGFS
YEIKEDLEDGEHRVEVSVSDSLGNNRVKEWKFRVGKINHYYGQLHSHTNISDGTGSLEDAYKWARDEGKADYFAVTDHSN
WFDNDTEANINDGSMSKAWTNAQNISDKYNDDGNFVAMYGYEMTWSGSTGGWGHINTFNTPGFETRKNSDMNLKNYYNTI
SQLPESVSQLNHPGKTFGDFADFGFYSEGADKVVNLIEVGNGEGPVRGSGYFPSYEYYTRALDKGWHVAPTNNQDNHKGK
WLTANDARTIILSEENSRDALYKAMNKKQVYSSEDKNTTIDYTVNNQIMGSNLGEVEDLDFNIEINDEDKEDTIKKVSII
ANGGVEVISKEFNSNKVSWNFKLKPEYSYYYVKVVQGDQDIAVTAPVWIGENVNVGLNELKTDKDMLLVGDEAKFSIEVY
NNSSERLNNIKVEFFNGEISGEKKIGEEIIESLEGNSLKESSITWQPERAGEFTIYAKATISINGTDKTFTKSSKIEVVN
EGDVYKVMIDGAHANQYVTGNYAGKIDAFEKLLTENDCIPIINKEEITEKSLENVDLLVITDPQGIDEPKYEVYKSNFTA
SEIDAIGKYMDKGGNIIITSRADYKDGVGEYSNGAQLNPILEKINSELRVNDDQVADYEVNEGQQFRLMLNKYSSPNFNL
VEGLGEEDKFSFYSGSSVVLKDGAKGEKVDFLVSGHESTGTDDSDKQGDNVPVEKGQVNVLAVEELSNGGKVAVAGSTFF
SNFEIDGTNAESKSNSKVTKNIINWMLPEKELEKLTIKEFREDKNNDGEPDRLGEEYVLEGIVTAQSEAVEPKNAFFEVI
YIQDETGGINVFGVSNTPVKVGQKVRVKGRVEAYQGEFEIQISDESADLEIIDENINEVSPKEMSTGDSMLHENEGWLTK
VTGKVVNMDDSNLYLDDGSGVSRIYVEGYIWDGINENMKGKWDPRIKVGDTVSAIGLSSEDPEGNRLRVRNTGEIVLQEE
ENLGVINTEITSDKNEIKENEKISLLTKVENSTKEALENLTLKIFANNGENEVLLKEEKIDSLGVNESKELTFEHAFELE
GRYSIGIKLFDSEGNEIKSNNKEFSLVVLKEINGGDSDNNGDANNGGDSNNGSGNDSGEENKPGIDKPNTEKPEELPNTG
NRMNANMLMGFGALYLALGFYMVSKRKKVR

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA