Click here to switch to the map view.

The map label for this gene is priA

Identifier: 110798841

GI number:

Start: 2236983

End: 2239178

Strand: Reverse

Name: priA

Synonym: CPF_1998

Alternate gene names: NA

Gene position: NA

Preceding gene: 110799232

Following gene: 110799951

Centisome position: NA

GC content: NA

Gene sequence:

>2196_bases
TTGGAGAAATTTGCTGAAGTAATTGTAAATAGTGAAGCTGTTACAATTGATAAGCCTTTTACATATAAGATTAAAGAAGA
TTTAGTTCATAATATAAAGGTTGGACATAGAGTTTTAATTCCTTTTGGAAATGGAAATAAAAAAATTGAAGGTTTTGTTT
TAAAAATATTAGATAATGTTGAAAATAAAAGTATAAGATATAAATCTATATATAATGTTTGTGATAATGAACCCTTATTA
AGTGAAGATTCTTTAAAGCTTATTAAATTTTTAAGAGAGAAATATTTATGTAAGTATATAGATGCTATAAGAGTTATGAT
TCCACCTAAAATAATGAGTGGAAATAAGGAAAAAACAAAACAAGTTATAGTATTTAAAAAATATATAGAAGAATTAAGTG
AGCCACAAAAAAGAACTTTAGAGCTAATTGAAGAAAAAAGTGGTGGTTTCACAAAAGCAGAATGGAATAAAATTTTTAAT
ATATCAACATATATGATAAATAAATTAATAGAATTAGATTGTGCTTCTAGTGAAGAAGTAAGGGTTGGAAGGGAAAATTT
AAGAGAATTTAAGCCTTATCCGCCTAAGAGTTTAAATGAAGAACAGATAAGAGCATATGATACAATTTTAGAAAGTGATA
AAAATATATTTTTATTAAAGGGCGTAACTGGAAGTGGAAAAACAGAAGTATATATGAATTTAGTTAGTTATATGCTCCTT
TTTGAAAAGAGTTCATTAATATTAGTACCAGAAATAGCTCTAACTCCTCAAATGATTGAAAGATTTAAAGGGAGATTTGG
AAAAGATGTAGCGGTCTTTCATAGTAGGCTTTCAGATGGAGAGAGATATGATGAATGGTATAGGGTTAAAAATGATCAAG
TTAAGGTTGTTATAGGAGCCAGATCTGCTATATTTTTACCCTTTAATGATTTAGGACTAATAGTAGTAGATGAAGAACAT
GAAAGTAGTTATAAATCAGATATGAATCCTAAATATAATACTATAGAAGTTTGTGAGTATTTAAGTTTTCTAAAAAATTG
TAAGGTTGTTTTAGGTTCAGCAACCCCTAGTGTTGTTAGTTTTTATAAAGCACTTAAAGGGAATTATGAATTAATTGAAC
TTAAAAAGAGAGTTAATAATGGAGAACTTCCTAATGTATCTATTGTGGATATGAGGGAAGAGCTAAAATCAAATAATAAA
ACAATGTTTAGTAGGGATTTATATTTGAAGATAAAAGATAGATTAGAGAAAAAAGAACAAATAATTTTGTTTTTAAATAG
AAGAGGATTTTCATCCTTTGTTTCTTGTAGAAGTTGTGGATTTGTTTTTAAATGTAACAATTGTGACATATCAATGACTT
ATCATAATAATGGATACTTAGTTTGCCATTATTGTGGAAATACTGAAAAGATGCCTAAGCTTTGCCCTAAGTGTGGCAGT
AACTATGTTAAACATTTTGGGGTAGGAACAGAGAAATTAGAGGAAGCAGTACATCATTATTTTAAAGAAGCAAAGGTTTT
AAGGATGGATGTAGATACAACAAGAAAGAAAAATTCTCATGAGGAAATTTATAACTCATTTAAAAGTAAAGAAGCAGATA
TATTAATAGGAACTCAGATGATAGCTAAGGGGCTTGATTTCCCAGATGTAACCTTAGTTGGAGTTATGGCTGCAGATATG
TCTTTAAATTTGCCAGATTATAAGTCTAGTGAAAAGACATTTCAACTTATAACTCAGGTAAGTGGTAGAGCAGGACGTGG
TGATAAAAAGGGAGATGTAATAATTCAAAGTTATTCTCCAAAACATTATGCTTTGACCTGTGCAAGGGATAATAATTATG
AAGAGTTCTTTAAAAGAGAAATAAATGTAAGAAAACTTATGGCATATCCACCTTTTGATGATTTGTTTTTAATAAACCTA
AGTGCAAAGGGAGAAATAAAAGTAAAGATTTTTGCAAAAAAATTAGAGATGTATTTACGTAATATCTTAAAAGAATATGA
TAATATATTTATATACGAAGCATGTCCTTGTTCTATAAGTAAAATAAAAAATGTTTATAGATGGCAAATTCTAATTAAGG
GAAAATTAGATTTAGAGGTATGCTCTAAAATAAAAAAAGGGGTTTATGAATTATCCAAAGATGTTTATAATGAGATTAAG
ATTGGTTTAGACATAAATCCTAATAGCTTAATGTAA

Upstream 100 bases:

>100_bases
TAGAAAAGATGTCTAAAAGAGAAGTTGCAAAGAATATATTTGACATTATAAAAGGGCGCTAATTGCGCCTTTTTATTCTA
TATGAACAAGGGTGATTATT

Downstream 100 bases:

>100_bases
GGAGGAAGTTATTTTGGCAATAAGAAACTTAAGATTTAATGACGACGAAATATTAAGAAAAAAATGTAGAGTAGTTGATG
ACATTAATGATAGAATAAAA

Product: primosome assembly protein PriA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>731_residues
MEKFAEVIVNSEAVTIDKPFTYKIKEDLVHNIKVGHRVLIPFGNGNKKIEGFVLKILDNVENKSIRYKSIYNVCDNEPLL
SEDSLKLIKFLREKYLCKYIDAIRVMIPPKIMSGNKEKTKQVIVFKKYIEELSEPQKRTLELIEEKSGGFTKAEWNKIFN
ISTYMINKLIELDCASSEEVRVGRENLREFKPYPPKSLNEEQIRAYDTILESDKNIFLLKGVTGSGKTEVYMNLVSYMLL
FEKSSLILVPEIALTPQMIERFKGRFGKDVAVFHSRLSDGERYDEWYRVKNDQVKVVIGARSAIFLPFNDLGLIVVDEEH
ESSYKSDMNPKYNTIEVCEYLSFLKNCKVVLGSATPSVVSFYKALKGNYELIELKKRVNNGELPNVSIVDMREELKSNNK
TMFSRDLYLKIKDRLEKKEQIILFLNRRGFSSFVSCRSCGFVFKCNNCDISMTYHNNGYLVCHYCGNTEKMPKLCPKCGS
NYVKHFGVGTEKLEEAVHHYFKEAKVLRMDVDTTRKKNSHEEIYNSFKSKEADILIGTQMIAKGLDFPDVTLVGVMAADM
SLNLPDYKSSEKTFQLITQVSGRAGRGDKKGDVIIQSYSPKHYALTCARDNNYEEFFKREINVRKLMAYPPFDDLFLINL
SAKGEIKVKIFAKKLEMYLRNILKEYDNIFIYEACPCSISKIKNVYRWQILIKGKLDLEVCSKIKKGVYELSKDVYNEIK
IGLDINPNSLM

Sequences:
NA

Specific function: NA

COG id: COG1198

COG function: function code L; Primosomal protein N' (replication factor Y) - superfamily II helicase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA