The gene/protein map for NC_011529 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110835606

Identifier: 110835606

GI number: 110835606

Start: 3105610

End: 3106275

Strand: Reverse

Name: 110835606

Synonym: ABO_2745

Alternate gene names: NA

Gene position: 3106275-3105610 (Counterclockwise)

Preceding gene: 110835607

Following gene: 110835602

Centisome position: 99.56

GC content: 56.76

Gene sequence:

>666_bases
ATGACTGATTACGAACTGATCCGCAGCAAGCGCCGCAGCCTGGAGCTTCGTGTTCTCGAAGATGGGCGTGTTCAAGTGCG
CGCGCCTCAACAGACACCTCTACGGATGGTGCAGGCTTTTGTGGCAAGCCGTAGTCAATGGATTGCCGCGCAGCAAGAAC
GGCAAGCACAGCGGCCCCGACAGCGTTGGCACGACGGTGCTGCGTTTGTCCTGCGGGGGAAAACTCTCAGCCTGGATGTG
AGCGAAGGGGCTACCCGGGTTTTCGTCAGTGGCGGCTATCTCACCGTACGAGTGAGCGATTCGGATCAGGAAAGCAGTGT
GAAAACGGCGGTGCAAAACTGGTTACGCAAACAGGCGCGAGCGGCTTTCGAAGACAGTATTGAGCGCCAGTTCGACTGGT
TTGCTGCTGAAGGATTCTCACGCCCGGTATTACGGGTGAAAAGCATGCGTACCCGTTGGGGGTCTCTGTCTGCCCGCGGC
TACATCAATCTTAACTTGGCGCTGCTGCACTATCCTCCCAAGGCGCTGGATTATGTGGTCATGCATGAACTTTGCCATCT
CATACACATGAACCACGGCCCCGGTTTTCACGCCCTGATGGACGCCCGTATGCCCGACTGGCGTCAGCGAAAAAATCTCC
TAGACCAACCATGTTATCAGCCCTGA

Upstream 100 bases:

>100_bases
TGTGTGTCCCCCACAACGATTTCGCAGCCACGGCGAGCCAGAAAAAAATCTGCGCTCGCGGCATTTTCTTTAACGGTTAA
CTTTTTAGCCTGCCTTTGTA

Downstream 100 bases:

>100_bases
GCGCTGAGTTAATCGTGCAGAGTGTAAAGTTCAAACGCGGGAGGGTTGGTGATGGTGTGCCGGTGATGAATCAGAGTACG
CGGGCATGGTCTTTCAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Protease; Zinc-Dependent Protease; Zinc Metallopeptidase; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Peptidase; Hydrolase; Zinc Metallopeptidase Protein; Protease

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTDYELIRSKRRSLELRVLEDGRVQVRAPQQTPLRMVQAFVASRSQWIAAQQERQAQRPRQRWHDGAAFVLRGKTLSLDV
SEGATRVFVSGGYLTVRVSDSDQESSVKTAVQNWLRKQARAAFEDSIERQFDWFAAEGFSRPVLRVKSMRTRWGSLSARG
YINLNLALLHYPPKALDYVVMHELCHLIHMNHGPGFHALMDARMPDWRQRKNLLDQPCYQP

Sequences:

>Translated_221_residues
MTDYELIRSKRRSLELRVLEDGRVQVRAPQQTPLRMVQAFVASRSQWIAAQQERQAQRPRQRWHDGAAFVLRGKTLSLDV
SEGATRVFVSGGYLTVRVSDSDQESSVKTAVQNWLRKQARAAFEDSIERQFDWFAAEGFSRPVLRVKSMRTRWGSLSARG
YINLNLALLHYPPKALDYVVMHELCHLIHMNHGPGFHALMDARMPDWRQRKNLLDQPCYQP
>Mature_220_residues
TDYELIRSKRRSLELRVLEDGRVQVRAPQQTPLRMVQAFVASRSQWIAAQQERQAQRPRQRWHDGAAFVLRGKTLSLDVS
EGATRVFVSGGYLTVRVSDSDQESSVKTAVQNWLRKQARAAFEDSIERQFDWFAAEGFSRPVLRVKSMRTRWGSLSARGY
INLNLALLHYPPKALDYVVMHELCHLIHMNHGPGFHALMDARMPDWRQRKNLLDQPCYQP

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25618; Mature: 25486

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYELIRSKRRSLELRVLEDGRVQVRAPQQTPLRMVQAFVASRSQWIAAQQERQAQRPR
CCCHHHHHHHHHCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRWHDGAAFVLRGKTLSLDVSEGATRVFVSGGYLTVRVSDSDQESSVKTAVQNWLRKQAR
HHHCCCCEEEEECCEEEEECCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AAFEDSIERQFDWFAAEGFSRPVLRVKSMRTRWGSLSARGYINLNLALLHYPPKALDYVV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCHHHHHHHH
MHELCHLIHMNHGPGFHALMDARMPDWRQRKNLLDQPCYQP
HHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDYELIRSKRRSLELRVLEDGRVQVRAPQQTPLRMVQAFVASRSQWIAAQQERQAQRPR
CCHHHHHHHHHCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRWHDGAAFVLRGKTLSLDVSEGATRVFVSGGYLTVRVSDSDQESSVKTAVQNWLRKQAR
HHHCCCCEEEEECCEEEEECCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHH
AAFEDSIERQFDWFAAEGFSRPVLRVKSMRTRWGSLSARGYINLNLALLHYPPKALDYVV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCHHHHHHHH
MHELCHLIHMNHGPGFHALMDARMPDWRQRKNLLDQPCYQP
HHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA