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The map label for this gene is ureF

Identifier: 110835577

GI number: 110835577

Start: 3073969

End: 3074658

Strand: Reverse

Name: ureF

Synonym: ABO_2716

Alternate gene names: 110835577

Gene position: 3074658-3073969 (Counterclockwise)

Preceding gene: 110835578

Following gene: 110835576

Centisome position: 98.54

GC content: 56.96

Gene sequence:

>690_bases
ATGAATAACAGCGCCTTCTTTCGTTTGCAGCAATTGATCAGCCCATCGCTGCCCATCGGTGCCTTTACCTATTCGCAAGG
CATGGAGTGGGCGGTGGAGTGTGGCTGGATCAAAAATGCGGATGACCTGCATTGTTGGCTCGAATCCCTGCTGCAAAGCA
GCGTCCAAACCTTGGAATTACCGGTACTAGCGCGGCTCTATCACGCCAGTTGCCATCAGGATCGTGAAGCCTTTACCCAT
TGGGCGCACACCCTGTTGGCCTGGCGGGAAACCCGTGAGCTGCGCATGGAAGAATGTCAGCGTGGCCATGCCCTCACCAT
GGTACTGGACAGGCTCCCAGACGCTGCGAATTGGCCAGAGCTGCAGCAACCCGAATGGCGCGATGCGCTGGCGCAAACCC
AATTAGCAGGTTTCGCCCTGGCGAGTGCCCGCTGGGGCATCGAGCTGCAGCAAGCGCTCAACGGTTACCTATGGAGTTGG
CTGGAAAACATGGTGATCGTGGCCGTGAAGTTAATTCCTCTTGGCCAGAGTGATGGGCAGAGAGAGCTCTATCGTTTCAG
TGATCAATTGGCCGCGATTACCCAGCACGCCCTGGCCATGGATGACGACGATATTGGCTCCTCCTCTCCCGCCATGGCCA
TCGCCAGTTGCCTGCACGAAACCCAATACTGCCGGCTCTTCCGATCATAA

Upstream 100 bases:

>100_bases
GTGCTAGGCCAGCAGTTACAGCGAATTGCTCCCGCTCTGCGCGCCATTGTGGCTGGGGGTGCCGCCCTCGCGTTAATGCT
GCTGGCAGGCTGATCGCCTC

Downstream 100 bases:

>100_bases
GGCAGGTTCAAGAAGGGCACCAAACAAAGAAGAGCATCTAACAAAGCAGCTGCGGCAGCACAGCCGTGAAAAATTGATGT
GGGAGCGTGCTTACACGTGA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNNSAFFRLQQLISPSLPIGAFTYSQGMEWAVECGWIKNADDLHCWLESLLQSSVQTLELPVLARLYHASCHQDREAFTH
WAHTLLAWRETRELRMEECQRGHALTMVLDRLPDAANWPELQQPEWRDALAQTQLAGFALASARWGIELQQALNGYLWSW
LENMVIVAVKLIPLGQSDGQRELYRFSDQLAAITQHALAMDDDDIGSSSPAMAIASCLHETQYCRLFRS

Sequences:

>Translated_229_residues
MNNSAFFRLQQLISPSLPIGAFTYSQGMEWAVECGWIKNADDLHCWLESLLQSSVQTLELPVLARLYHASCHQDREAFTH
WAHTLLAWRETRELRMEECQRGHALTMVLDRLPDAANWPELQQPEWRDALAQTQLAGFALASARWGIELQQALNGYLWSW
LENMVIVAVKLIPLGQSDGQRELYRFSDQLAAITQHALAMDDDDIGSSSPAMAIASCLHETQYCRLFRS
>Mature_229_residues
MNNSAFFRLQQLISPSLPIGAFTYSQGMEWAVECGWIKNADDLHCWLESLLQSSVQTLELPVLARLYHASCHQDREAFTH
WAHTLLAWRETRELRMEECQRGHALTMVLDRLPDAANWPELQQPEWRDALAQTQLAGFALASARWGIELQQALNGYLWSW
LENMVIVAVKLIPLGQSDGQRELYRFSDQLAAITQHALAMDDDDIGSSSPAMAIASCLHETQYCRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_ALCBS (Q0VKY4)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694436.1
- STRING:   Q0VKY4
- GeneID:   4211736
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2716
- NMPDR:   fig|393595.12.peg.2725
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- BioCyc:   ABOR393595:ABO_2716-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 26103; Mature: 26103

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSAFFRLQQLISPSLPIGAFTYSQGMEWAVECGWIKNADDLHCWLESLLQSSVQTLEL
CCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH
PVLARLYHASCHQDREAFTHWAHTLLAWRETRELRMEECQRGHALTMVLDRLPDAANWPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
LQQPEWRDALAQTQLAGFALASARWGIELQQALNGYLWSWLENMVIVAVKLIPLGQSDGQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
RELYRFSDQLAAITQHALAMDDDDIGSSSPAMAIASCLHETQYCRLFRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNSAFFRLQQLISPSLPIGAFTYSQGMEWAVECGWIKNADDLHCWLESLLQSSVQTLEL
CCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH
PVLARLYHASCHQDREAFTHWAHTLLAWRETRELRMEECQRGHALTMVLDRLPDAANWPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
LQQPEWRDALAQTQLAGFALASARWGIELQQALNGYLWSWLENMVIVAVKLIPLGQSDGQ
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
RELYRFSDQLAAITQHALAMDDDDIGSSSPAMAIASCLHETQYCRLFRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA