| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835561
Identifier: 110835561
GI number: 110835561
Start: 3051822
End: 3053708
Strand: Direct
Name: 110835561
Synonym: ABO_2700
Alternate gene names: NA
Gene position: 3051822-3053708 (Clockwise)
Preceding gene: 110835558
Following gene: 110835562
Centisome position: 97.81
GC content: 59.51
Gene sequence:
>1887_bases ATGGAAAAACGCGCCCTCACAACACCCGTAGTCACCGCCATTCTCGCCACGCTCTGCATCAGCGTCAGCGCCGCTCCCTA CGACTGGAACTACCCGGCACCGATTAAATCCCCAGGCGCTAACAATAACGGCAAGGTTGTGCTGTTCGATGTCTCCCACG GTGGTACGGAAGGCAATGCCGACTGGGTTATCGACGGCGGCTTTTCCGATTTTGCTGACAGTCTCGTCAATGCCGGTTAT ACCGTGCAGGAATATCGCGGGGTAGATAAAAACAGCGACGGCGTTATCCAGTTCGTCGATGACTACACCAACCCCAGCAC GGCCAACAGTAACGCTAATGAAGCGGTGATTACCTACAGCGCCATTAGTCATGCCGACGTATTGGTGCTGGCTGAAAGCA ACCGCCCTTTCACCCAATCGGAATTACAGGCGCTGGAAGATTTTGTCGCCGATGGCAAGGGCATCTTCTTTATTGCCGAC CACTATAACGCAGACCGCAACCTGAACACTTGGGACAGTACCGAAGTATTCAATGGCTACAATCGTTCCACCTTGCCCCA GTTCAATGTAGGCGGCAGCTACGGCGATCTACGCAACCCGGGCACCGCCAACGGCTGGTTAGCCCAGGAGTTCGGTATTC GTTTCCGCTTCAACGCCATCGACTGGCATAGCGGCGCCAGCGGTATCGAACCCGCCAGCCAAGTGGAAGGCCTCACAACC GGCGTGGGCCCTGTGCTGATGGCCGGCGGCGCCACCCTTGCCATCACCGACCCCACCAAAGCCAAGGGGCTAGTGTACTT TTCCACTAGCGACAGCCCCAGCCGCTGGAGCCACGCGGTGGATTCTGGTCTCTACTTTGGCGGCACCGCCGAAGGCCCTT ATGTGGCCATCGCCAAATCCGGGGCGGGCAAAGCCGCTTTTATTGGCGACTCCAGCCCCATCGAAGATGCCAGCCCAAAA TACAAACGTCAGGATAACGGCAATACCAAAAGCACCTACCCAGGCTGGACCGATGCCGGTAACGCGGCTCAGCTCAGCAT GAACTTGATCGACTGGCTTGCTACACCGCAAAGCTATACTCGGTTCGACACCAGCGCCCACCCAGCAGGCACCGCCACCC CGACCCCCATGGCCAGCGAAGAGTTGGACGACCCGGATAACGGCCAGCCTTGGAACACCCCCTCCGGCGGCTATAACCCC TGGGATGCCAGCACCTTTGACTACGCGGCCTACGGCGCACCGGACGGCCCGGGCGGCAGCACTGGCGGTGGCAACGGCAA TGCTCTATCCGTGAGCGACGCTCTAGCCGAACCCACGGGAACAACGGTGACGGTGGAAGGCGTGATCACCCAAGCCATCA ACGGCGAGTACGCCCTAGAAATCCAGGACAGTGCCGGCAGCGCCACGCTTTACGTGAAACTGGAAAGTCAGTATCGCAGT GCCTTTAGCCCGCAGAATAATCCGCAGGTGGTCGGCGAGACACTCCAGGTCTCTGGCGAGCGTGATGTCTACATGGGCGA ACCGAGCATCGAATACGTCACCGACATGCAATGGGTGGCCAGCAATGCATCGAGCGGCACGTGTGGCAGCAATGGCGCCG TCTCGGTGAATGATGCCTACGCCAGCAGCCAAGGCAGTCCGCTCACCGTCATTGGCGAAGTGATTGGCGGCGTTAACGAC CCCCATGCCCTGGAGCTGGGCGACCTTGTTAGCAGCACCACCCTCTACGTGAAATTGGAAGCGGATCAGCGCGCCGAATA CAGCCCCGCCAACAACCCCGCCATGGTCGGCCAGACCCTCAAGGTGGACGGCGTGCGCGACCTCTACATGAGCACACCCA GCCTAGAATCCGTGAGCCATCTCGCGGTAATGGGTAACTGCCCCTGA
Upstream 100 bases:
>100_bases ACATTCATTCGGATTCATCAAACTATCACGATCTTTTTACCGCATTTTCTTGTTATGGCGTCAGCCTTGTTGTCTCCCTT TCTTGTAAGGATGACCGCAC
Downstream 100 bases:
>100_bases AACACCCAAGACATCACCCGCGGCGTTCGCGTCGCCCTTCTTTCAACTCAACACACAGGAAACACCATGAGTACTTCACT GCGATCCCTGCTGGTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MEKRALTTPVVTAILATLCISVSAAPYDWNYPAPIKSPGANNNGKVVLFDVSHGGTEGNADWVIDGGFSDFADSLVNAGY TVQEYRGVDKNSDGVIQFVDDYTNPSTANSNANEAVITYSAISHADVLVLAESNRPFTQSELQALEDFVADGKGIFFIAD HYNADRNLNTWDSTEVFNGYNRSTLPQFNVGGSYGDLRNPGTANGWLAQEFGIRFRFNAIDWHSGASGIEPASQVEGLTT GVGPVLMAGGATLAITDPTKAKGLVYFSTSDSPSRWSHAVDSGLYFGGTAEGPYVAIAKSGAGKAAFIGDSSPIEDASPK YKRQDNGNTKSTYPGWTDAGNAAQLSMNLIDWLATPQSYTRFDTSAHPAGTATPTPMASEELDDPDNGQPWNTPSGGYNP WDASTFDYAAYGAPDGPGGSTGGGNGNALSVSDALAEPTGTTVTVEGVITQAINGEYALEIQDSAGSATLYVKLESQYRS AFSPQNNPQVVGETLQVSGERDVYMGEPSIEYVTDMQWVASNASSGTCGSNGAVSVNDAYASSQGSPLTVIGEVIGGVND PHALELGDLVSSTTLYVKLEADQRAEYSPANNPAMVGQTLKVDGVRDLYMSTPSLESVSHLAVMGNCP
Sequences:
>Translated_628_residues MEKRALTTPVVTAILATLCISVSAAPYDWNYPAPIKSPGANNNGKVVLFDVSHGGTEGNADWVIDGGFSDFADSLVNAGY TVQEYRGVDKNSDGVIQFVDDYTNPSTANSNANEAVITYSAISHADVLVLAESNRPFTQSELQALEDFVADGKGIFFIAD HYNADRNLNTWDSTEVFNGYNRSTLPQFNVGGSYGDLRNPGTANGWLAQEFGIRFRFNAIDWHSGASGIEPASQVEGLTT GVGPVLMAGGATLAITDPTKAKGLVYFSTSDSPSRWSHAVDSGLYFGGTAEGPYVAIAKSGAGKAAFIGDSSPIEDASPK YKRQDNGNTKSTYPGWTDAGNAAQLSMNLIDWLATPQSYTRFDTSAHPAGTATPTPMASEELDDPDNGQPWNTPSGGYNP WDASTFDYAAYGAPDGPGGSTGGGNGNALSVSDALAEPTGTTVTVEGVITQAINGEYALEIQDSAGSATLYVKLESQYRS AFSPQNNPQVVGETLQVSGERDVYMGEPSIEYVTDMQWVASNASSGTCGSNGAVSVNDAYASSQGSPLTVIGEVIGGVND PHALELGDLVSSTTLYVKLEADQRAEYSPANNPAMVGQTLKVDGVRDLYMSTPSLESVSHLAVMGNCP >Mature_628_residues MEKRALTTPVVTAILATLCISVSAAPYDWNYPAPIKSPGANNNGKVVLFDVSHGGTEGNADWVIDGGFSDFADSLVNAGY TVQEYRGVDKNSDGVIQFVDDYTNPSTANSNANEAVITYSAISHADVLVLAESNRPFTQSELQALEDFVADGKGIFFIAD HYNADRNLNTWDSTEVFNGYNRSTLPQFNVGGSYGDLRNPGTANGWLAQEFGIRFRFNAIDWHSGASGIEPASQVEGLTT GVGPVLMAGGATLAITDPTKAKGLVYFSTSDSPSRWSHAVDSGLYFGGTAEGPYVAIAKSGAGKAAFIGDSSPIEDASPK YKRQDNGNTKSTYPGWTDAGNAAQLSMNLIDWLATPQSYTRFDTSAHPAGTATPTPMASEELDDPDNGQPWNTPSGGYNP WDASTFDYAAYGAPDGPGGSTGGGNGNALSVSDALAEPTGTTVTVEGVITQAINGEYALEIQDSAGSATLYVKLESQYRS AFSPQNNPQVVGETLQVSGERDVYMGEPSIEYVTDMQWVASNASSGTCGSNGAVSVNDAYASSQGSPLTVIGEVIGGVND PHALELGDLVSSTTLYVKLEADQRAEYSPANNPAMVGQTLKVDGVRDLYMSTPSLESVSHLAVMGNCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65944; Mature: 65944
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRALTTPVVTAILATLCISVSAAPYDWNYPAPIKSPGANNNGKVVLFDVSHGGTEGNA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DWVIDGGFSDFADSLVNAGYTVQEYRGVDKNSDGVIQFVDDYTNPSTANSNANEAVITYS CEEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE AISHADVLVLAESNRPFTQSELQALEDFVADGKGIFFIADHYNADRNLNTWDSTEVFNGY ECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHCCC NRSTLPQFNVGGSYGDLRNPGTANGWLAQEFGIRFRFNAIDWHSGASGIEPASQVEGLTT CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCEEEEEEEEEECCCCCCCCCHHHHCCCCC GVGPVLMAGGATLAITDPTKAKGLVYFSTSDSPSRWSHAVDSGLYFGGTAEGPYVAIAKS CCCCEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCCEEEEEEC GAGKAAFIGDSSPIEDASPKYKRQDNGNTKSTYPGWTDAGNAAQLSMNLIDWLATPQSYT CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCHHH RFDTSAHPAGTATPTPMASEELDDPDNGQPWNTPSGGYNPWDASTFDYAAYGAPDGPGGS CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC TGGGNGNALSVSDALAEPTGTTVTVEGVITQAINGEYALEIQDSAGSATLYVKLESQYRS CCCCCCCEEEHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCEEEEEEECHHHHH AFSPQNNPQVVGETLQVSGERDVYMGEPSIEYVTDMQWVASNASSGTCGSNGAVSVNDAY HCCCCCCCEEECEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHH ASSQGSPLTVIGEVIGGVNDPHALELGDLVSSTTLYVKLEADQRAEYSPANNPAMVGQTL CCCCCCCEEEHHHHHCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEE KVDGVRDLYMSTPSLESVSHLAVMGNCP EECCCHHHHCCCCCHHHHCEEEEECCCC >Mature Secondary Structure MEKRALTTPVVTAILATLCISVSAAPYDWNYPAPIKSPGANNNGKVVLFDVSHGGTEGNA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DWVIDGGFSDFADSLVNAGYTVQEYRGVDKNSDGVIQFVDDYTNPSTANSNANEAVITYS CEEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEE AISHADVLVLAESNRPFTQSELQALEDFVADGKGIFFIADHYNADRNLNTWDSTEVFNGY ECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHCCC NRSTLPQFNVGGSYGDLRNPGTANGWLAQEFGIRFRFNAIDWHSGASGIEPASQVEGLTT CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCEEEEEEEEEECCCCCCCCCHHHHCCCCC GVGPVLMAGGATLAITDPTKAKGLVYFSTSDSPSRWSHAVDSGLYFGGTAEGPYVAIAKS CCCCEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCCEEEEEEC GAGKAAFIGDSSPIEDASPKYKRQDNGNTKSTYPGWTDAGNAAQLSMNLIDWLATPQSYT CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCHHH RFDTSAHPAGTATPTPMASEELDDPDNGQPWNTPSGGYNPWDASTFDYAAYGAPDGPGGS CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC TGGGNGNALSVSDALAEPTGTTVTVEGVITQAINGEYALEIQDSAGSATLYVKLESQYRS CCCCCCCEEEHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCEEEEEEECHHHHH AFSPQNNPQVVGETLQVSGERDVYMGEPSIEYVTDMQWVASNASSGTCGSNGAVSVNDAY HCCCCCCCEEECEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHH ASSQGSPLTVIGEVIGGVNDPHALELGDLVSSTTLYVKLEADQRAEYSPANNPAMVGQTL CCCCCCCEEEHHHHHCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEE KVDGVRDLYMSTPSLESVSHLAVMGNCP EECCCHHHHCCCCCHHHHCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA