| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is dsbA [H]
Identifier: 110835510
GI number: 110835510
Start: 2995478
End: 2996113
Strand: Reverse
Name: dsbA [H]
Synonym: ABO_2649
Alternate gene names: 110835510
Gene position: 2996113-2995478 (Counterclockwise)
Preceding gene: 110835511
Following gene: 110835509
Centisome position: 96.02
GC content: 51.73
Gene sequence:
>636_bases ATGCTTCGCATTGTAACGGCTTTGCTGCTGAGTCTGGGGCTGGCGACCGGAGTTGCGGCCGCCGAAGAACATACCCGTTT TGCGGTAGACACTCATTATAAAGTTCTGGATGTGCCCGGATCTGTTGACGATCCCAGCAAGGTAGAAGTACGGGAGTTCT TTTCCTATGGCTGCCCTCACTGCTATTCACTGGAGCCGGCTGTTGATGCTTGGCTGGAAGAGAAGCCAGACTACATCGAC TATGTGCGCACCCCAGTGTTATTCCTGCGTAACGCCGAACCGCTGGCTCGTGCCTACTACGTAGAAGACGCCCTTGGCTT GGTTGATGAAATGCATGTGCCGTTGTTTGATGCGATCCACAAGCACCGTGAGCCTTTATTCAACGAGTCGGCGTTGGCCA ACTTTTTCCGCAAGTATGGTGTTGAGCCTGCGGAGTTCAGCAAGCTCTATGGTTCGTTTGGTGTTTCCACCAAGATTCGT CAGGCAGATGCGTTGAGCAAAAAATACCAGATTCCCGGAGTGCCCAACTTCGTGGTGAACGGCAAGTATTTGGTAAAGCG CGAAAACGTGAAGAGCAACGAGGAGCTGTTCAAGGTGATTGAATTCTTGGTGAACAAGGAAAAGACAGGCAGCTGA
Upstream 100 bases:
>100_bases AAAGATATGGCTCTGAGTGGGTGCGGATTGTACTTACTAGGGAGAAAAATGCCGCCCCGGTTGTCACAATGGGCGCAAAC CAACAAAAAAGGAGAGCGAT
Downstream 100 bases:
>100_bases TATTATGTTGCTTGATCGCGCTAGACTGGCCTACCGTGACTGGAAAGCCCGGCCCGCGGGTTTTTCCTTTGCCCGGGAAG GGGCACGAAAGACCCGCCAG
Product: DsbA family thiol:disulfide interchange protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS
Sequences:
>Translated_211_residues MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS >Mature_211_residues MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS
Specific function: Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790291, Length=155, Percent_Identity=30.3225806451613, Blast_Score=77, Evalue=8e-16,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023205 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: 5.3.4.1
Molecular weight: Translated: 23850; Mature: 23850
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPH CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCC CYSLEPAVDAWLEEKPDYIDYVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIH CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH KHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIRQADALSKKYQIPGVPNFVVN HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEC GKYLVKRENVKSNEELFKVIEFLVNKEKTGS CEEEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPH CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCC CYSLEPAVDAWLEEKPDYIDYVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIH CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH KHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIRQADALSKKYQIPGVPNFVVN HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEC GKYLVKRENVKSNEELFKVIEFLVNKEKTGS CEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10051655 [H]