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The map label for this gene is 110835446

Identifier: 110835446

GI number: 110835446

Start: 2926078

End: 2927265

Strand: Direct

Name: 110835446

Synonym: ABO_2585

Alternate gene names: NA

Gene position: 2926078-2927265 (Clockwise)

Preceding gene: 110835445

Following gene: 110835463

Centisome position: 93.78

GC content: 54.63

Gene sequence:

>1188_bases
ATGCTGAATTATTTGAGTGAGGGCCTACTGGCTCCGAGCCTCGGCGCCTTGGTGCTAATCACCTTGGCCATGACCCACGT
GACCATTGTCAGTGTCACCGTGTACCTGCACCGCTATTCCGCGCACCGCGCGCTGGACATGCACCCGGTGCTCAAACATT
TTTTCCGTTTCTGGCTGTGGCTCACCACCGCCCAGAACACCCTAGAGTGGACCGCCATCCACCGCAAACACCACGCTAAG
TGCGAGACTGAAGAAGACCCCCACAGCCCGGTAGTTAAAGGCATCCGCAAGGTACTAAGCGAAGGGGCAGAACTGTACCG
CGAAGAAGCAGAAAATAAAGAAACCCTGAAAAAATACGGCGCCGGCTGCCCTGATGATTGGGTCGAACGCAACGTCTATT
CTCGGTTCCCCATGGCCGGCATTACCTTAATGGCCGTTATTGATCTGCTATTGTTTGGCGTCATCGGCATTACCGTATGG
GCCGTACAAATGATCTGGATTCCACTGTTCGCCGCCGGCATCATCAATGGCCTAGGGCACTACTGGGGTTACCGGAACTT
CGAATGCGCCGATGCATCACGCAACATTTCGCCTTGGGGCATTCTGATTGGCGGCGAAGAGCTGCATAACAATCATCACA
CCTATCCAAACTCCGCCAAGTTATCTGTGCGTCGTTTCGAATTCGATGCCGGCTGGGCTTGGATTCGCCTGTTCGAAATA
GTGGGCCTAGCCAAGGTGAAGAAAGTGGCACCTAAACCCACCCTGGCAAAAAACGCTCGCGGAATCGACGTGGACGCCCT
ACGCGGCGTCATGCAGCACCGCTTCCAAGTTATGCGGCATTACCGCAAAGCCGTGATTACCCCCGTTTTCAAGCAGGAAC
AAGCCCGCGCCTGTGACGCCACCCGTGAATTTTACGCCCGCGCCAAAGCCTTACTGCATCAGGATTTGACCCTAATCAAA
CCGAATCAAGAGCTACGCCTCAAAAAGCTCACGGAAAATAACGAGACGCTAGAAGCTATTTACCAATTCCGTTTGCGCCT
GCAAGACATCTGGTCACAGACCAGCCGTAGCTCCACGGAAATGGTAGAAGCACTAGAAAAGTGGTGCCATGACGCCCGCC
AATCCGGCATTGATGCACTTCAAGAGTTCGCCGACCGGCTTCCTCATTACCGCCCCGCTACCGCCTGA

Upstream 100 bases:

>100_bases
TGATTGACCGTAAAGTCCGAATTTGACCTGCTTCGTGTCTTCTATCTGCCATCACCGGTAGGGCACAATAGAGGCTCTAT
CTTTTTATTGTGCGACATCT

Downstream 100 bases:

>100_bases
TCATTTGGCAAAGCGACAAATCACCTCACCGGCTGCTAAAAACAGCCGGTGAGGTTTGGCGTGTAACTCTACACGGGCTT
TGAAGTAGCACAGCCGGGCA

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Delta-9 Desaturase; Stearoyl-CoA Desaturase; Acyl-CoA Desaturase; Membrane-Bound Fatty Acid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLNYLSEGLLAPSLGALVLITLAMTHVTIVSVTVYLHRYSAHRALDMHPVLKHFFRFWLWLTTAQNTLEWTAIHRKHHAK
CETEEDPHSPVVKGIRKVLSEGAELYREEAENKETLKKYGAGCPDDWVERNVYSRFPMAGITLMAVIDLLLFGVIGITVW
AVQMIWIPLFAAGIINGLGHYWGYRNFECADASRNISPWGILIGGEELHNNHHTYPNSAKLSVRRFEFDAGWAWIRLFEI
VGLAKVKKVAPKPTLAKNARGIDVDALRGVMQHRFQVMRHYRKAVITPVFKQEQARACDATREFYARAKALLHQDLTLIK
PNQELRLKKLTENNETLEAIYQFRLRLQDIWSQTSRSSTEMVEALEKWCHDARQSGIDALQEFADRLPHYRPATA

Sequences:

>Translated_395_residues
MLNYLSEGLLAPSLGALVLITLAMTHVTIVSVTVYLHRYSAHRALDMHPVLKHFFRFWLWLTTAQNTLEWTAIHRKHHAK
CETEEDPHSPVVKGIRKVLSEGAELYREEAENKETLKKYGAGCPDDWVERNVYSRFPMAGITLMAVIDLLLFGVIGITVW
AVQMIWIPLFAAGIINGLGHYWGYRNFECADASRNISPWGILIGGEELHNNHHTYPNSAKLSVRRFEFDAGWAWIRLFEI
VGLAKVKKVAPKPTLAKNARGIDVDALRGVMQHRFQVMRHYRKAVITPVFKQEQARACDATREFYARAKALLHQDLTLIK
PNQELRLKKLTENNETLEAIYQFRLRLQDIWSQTSRSSTEMVEALEKWCHDARQSGIDALQEFADRLPHYRPATA
>Mature_395_residues
MLNYLSEGLLAPSLGALVLITLAMTHVTIVSVTVYLHRYSAHRALDMHPVLKHFFRFWLWLTTAQNTLEWTAIHRKHHAK
CETEEDPHSPVVKGIRKVLSEGAELYREEAENKETLKKYGAGCPDDWVERNVYSRFPMAGITLMAVIDLLLFGVIGITVW
AVQMIWIPLFAAGIINGLGHYWGYRNFECADASRNISPWGILIGGEELHNNHHTYPNSAKLSVRRFEFDAGWAWIRLFEI
VGLAKVKKVAPKPTLAKNARGIDVDALRGVMQHRFQVMRHYRKAVITPVFKQEQARACDATREFYARAKALLHQDLTLIK
PNQELRLKKLTENNETLEAIYQFRLRLQDIWSQTSRSSTEMVEALEKWCHDARQSGIDALQEFADRLPHYRPATA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45350; Mature: 45350

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYLSEGLLAPSLGALVLITLAMTHVTIVSVTVYLHRYSAHRALDMHPVLKHFFRFWLW
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LTTAQNTLEWTAIHRKHHAKCETEEDPHSPVVKGIRKVLSEGAELYREEAENKETLKKYG
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
AGCPDDWVERNVYSRFPMAGITLMAVIDLLLFGVIGITVWAVQMIWIPLFAAGIINGLGH
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWGYRNFECADASRNISPWGILIGGEELHNNHHTYPNSAKLSVRRFEFDAGWAWIRLFEI
HCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
VGLAKVKKVAPKPTLAKNARGIDVDALRGVMQHRFQVMRHYRKAVITPVFKQEQARACDA
HHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREFYARAKALLHQDLTLIKPNQELRLKKLTENNETLEAIYQFRLRLQDIWSQTSRSSTE
HHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MVEALEKWCHDARQSGIDALQEFADRLPHYRPATA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLNYLSEGLLAPSLGALVLITLAMTHVTIVSVTVYLHRYSAHRALDMHPVLKHFFRFWLW
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LTTAQNTLEWTAIHRKHHAKCETEEDPHSPVVKGIRKVLSEGAELYREEAENKETLKKYG
HHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
AGCPDDWVERNVYSRFPMAGITLMAVIDLLLFGVIGITVWAVQMIWIPLFAAGIINGLGH
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWGYRNFECADASRNISPWGILIGGEELHNNHHTYPNSAKLSVRRFEFDAGWAWIRLFEI
HCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
VGLAKVKKVAPKPTLAKNARGIDVDALRGVMQHRFQVMRHYRKAVITPVFKQEQARACDA
HHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TREFYARAKALLHQDLTLIKPNQELRLKKLTENNETLEAIYQFRLRLQDIWSQTSRSSTE
HHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
MVEALEKWCHDARQSGIDALQEFADRLPHYRPATA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA