| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835328
Identifier: 110835328
GI number: 110835328
Start: 2795286
End: 2796356
Strand: Direct
Name: 110835328
Synonym: ABO_2467
Alternate gene names: NA
Gene position: 2795286-2796356 (Clockwise)
Preceding gene: 110835327
Following gene: 110835330
Centisome position: 89.59
GC content: 57.61
Gene sequence:
>1071_bases ATGAAACGCCGTGAACTTCTAATCGCGATGGCCACCCTGGCCGCCAGTGGCTGGCTGCTAAGGCCGAGCAATCAGGGCCA ACCCCACGGCGATTACTTTCAAACCATCAACGACTACCTGCGTCGCGCCGGACCGGGCCGCCCCTTGATGCTCATCGATC GCCAACGACTGGCCGCCAACTGCAAGACACTGATGAGCATGATGCCCCGCCACTGCCAGCTTCGCATCGTGGCCAAATCC CTACCCAGCGTCCCCCTTATTCAGGAAGTAATGACCCACACCGGCAGCCGGCGGATAATGGTATTCCATCAACCTTTTAT GAACGCTCTGGCCGATGCCGAACCCGGCTGTGACATGCTACTGGGTAAACCCATGCCGATTCGGGCAGCACGACGTTTCT ATTCTGAGTTGAGCCACAATGAACAGAGCCATCCCAGCCCGTTCAAACCGGACCAACAACTGCAGTGGCTGATTGATTCC TCCTCTCGCCTAGAGCAATACCTGAGCCTTGCCCGCGAGCAGCAACGACATCTCAACATCAACATTGAGATCGATGTGGG CCTGCACCGGGGCGGGCTTACCGACCCCCAGCAACTGGACGCCATGATCGCGCTGATTGAGGCCCACCCCGAGCAGCTAC GCTTTAGTGGCTTCATGGGCCACGACGCTCACGTGGGTAGACTACCCAGTTTTGTACAGAGCGCAGAAGAAGGCCACCGG GAAACCGAGGCCCTCTACCAGCAGTATATCCACAGGTTGTACCACCTGAATCCGACCTATCGAAAACAAGACCTGTGCTT TAACGGTGCCGGCAGCCCAACGCTAGCGCTCTATGACGACAGCACCGTGGTCAACGAACTCAGTGCCGGCTCCTGCCTAG TCAAAGCCAGCGACTTCGATCTGCCACTACTGCAACGCTTCCAACCCGCGGCCTTTATTGCCGCCCCGGTGATCAAGCAA CTGAATGGCCTCGCCCTGCCCGGCCCACTACCACTGGGCGAACTCTGGCAAAGCTGGGACACCAATCGCCGGCAAAGCTA TTTTATTTGGGTATACGGATTTAATGGTTGA
Upstream 100 bases:
>100_bases GAACCCACAAGGACGCATGCTGAATGACCATCTCAAGACGCTGTTTACGTAGTGCGAGGTTTGCCTGCACCGTCTTCATT GATAGCAAAAGGGGGCGTTT
Downstream 100 bases:
>100_bases TGGGGCACCTTCACCCCACCAACCTGATACCACCCTCAGATGGTTGATAGATCGACCCCGTAGTTGAGTTCCTCTGCGAA GTCCGGCAGTCCGTAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Alanine Racemase-Like; Alanine Racemase Domain Protein; Alanine Racemase N-Terminal Domain Family
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKRRELLIAMATLAASGWLLRPSNQGQPHGDYFQTINDYLRRAGPGRPLMLIDRQRLAANCKTLMSMMPRHCQLRIVAKS LPSVPLIQEVMTHTGSRRIMVFHQPFMNALADAEPGCDMLLGKPMPIRAARRFYSELSHNEQSHPSPFKPDQQLQWLIDS SSRLEQYLSLAREQQRHLNINIEIDVGLHRGGLTDPQQLDAMIALIEAHPEQLRFSGFMGHDAHVGRLPSFVQSAEEGHR ETEALYQQYIHRLYHLNPTYRKQDLCFNGAGSPTLALYDDSTVVNELSAGSCLVKASDFDLPLLQRFQPAAFIAAPVIKQ LNGLALPGPLPLGELWQSWDTNRRQSYFIWVYGFNG
Sequences:
>Translated_356_residues MKRRELLIAMATLAASGWLLRPSNQGQPHGDYFQTINDYLRRAGPGRPLMLIDRQRLAANCKTLMSMMPRHCQLRIVAKS LPSVPLIQEVMTHTGSRRIMVFHQPFMNALADAEPGCDMLLGKPMPIRAARRFYSELSHNEQSHPSPFKPDQQLQWLIDS SSRLEQYLSLAREQQRHLNINIEIDVGLHRGGLTDPQQLDAMIALIEAHPEQLRFSGFMGHDAHVGRLPSFVQSAEEGHR ETEALYQQYIHRLYHLNPTYRKQDLCFNGAGSPTLALYDDSTVVNELSAGSCLVKASDFDLPLLQRFQPAAFIAAPVIKQ LNGLALPGPLPLGELWQSWDTNRRQSYFIWVYGFNG >Mature_356_residues MKRRELLIAMATLAASGWLLRPSNQGQPHGDYFQTINDYLRRAGPGRPLMLIDRQRLAANCKTLMSMMPRHCQLRIVAKS LPSVPLIQEVMTHTGSRRIMVFHQPFMNALADAEPGCDMLLGKPMPIRAARRFYSELSHNEQSHPSPFKPDQQLQWLIDS SSRLEQYLSLAREQQRHLNINIEIDVGLHRGGLTDPQQLDAMIALIEAHPEQLRFSGFMGHDAHVGRLPSFVQSAEEGHR ETEALYQQYIHRLYHLNPTYRKQDLCFNGAGSPTLALYDDSTVVNELSAGSCLVKASDFDLPLLQRFQPAAFIAAPVIKQ LNGLALPGPLPLGELWQSWDTNRRQSYFIWVYGFNG
Specific function: Unknown
COG id: COG3616
COG function: function code E; Predicted amino acid aldolase or racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40348; Mature: 40348
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRELLIAMATLAASGWLLRPSNQGQPHGDYFQTINDYLRRAGPGRPLMLIDRQRLAAN CCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHH CKTLMSMMPRHCQLRIVAKSLPSVPLIQEVMTHTGSRRIMVFHQPFMNALADAEPGCDML HHHHHHHCCCHHEEEEEHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCHH LGKPMPIRAARRFYSELSHNEQSHPSPFKPDQQLQWLIDSSSRLEQYLSLAREQQRHLNI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEE NIEIDVGLHRGGLTDPQQLDAMIALIEAHPEQLRFSGFMGHDAHVGRLPSFVQSAEEGHR EEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH ETEALYQQYIHRLYHLNPTYRKQDLCFNGAGSPTLALYDDSTVVNELSAGSCLVKASDFD HHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHCCCCEEEEECCCC LPLLQRFQPAAFIAAPVIKQLNGLALPGPLPLGELWQSWDTNRRQSYFIWVYGFNG CHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCC >Mature Secondary Structure MKRRELLIAMATLAASGWLLRPSNQGQPHGDYFQTINDYLRRAGPGRPLMLIDRQRLAAN CCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHH CKTLMSMMPRHCQLRIVAKSLPSVPLIQEVMTHTGSRRIMVFHQPFMNALADAEPGCDML HHHHHHHCCCHHEEEEEHHHCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCHH LGKPMPIRAARRFYSELSHNEQSHPSPFKPDQQLQWLIDSSSRLEQYLSLAREQQRHLNI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEE NIEIDVGLHRGGLTDPQQLDAMIALIEAHPEQLRFSGFMGHDAHVGRLPSFVQSAEEGHR EEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH ETEALYQQYIHRLYHLNPTYRKQDLCFNGAGSPTLALYDDSTVVNELSAGSCLVKASDFD HHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHCCCCEEEEECCCC LPLLQRFQPAAFIAAPVIKQLNGLALPGPLPLGELWQSWDTNRRQSYFIWVYGFNG CHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA