Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835169

Identifier: 110835169

GI number: 110835169

Start: 2633881

End: 2635389

Strand: Reverse

Name: 110835169

Synonym: ABO_2308

Alternate gene names: NA

Gene position: 2635389-2633881 (Counterclockwise)

Preceding gene: 110835170

Following gene: 110835168

Centisome position: 84.46

GC content: 41.35

Gene sequence:

>1509_bases
TTGGTTTTGCTCCTCTTAACAAGCGGCGGCAGGCGGATCAAATTTGCGCTCGTTCCTCGCTGCAATTTGCCCGCTGCGCC
GGGCGTTAGCAGTCAAAGGGAAGATCGAGTGATACTAAAAAGTCGTGACATTGAAATTATTGAAGATGATCCATATCGAA
ATGACGCACTGAGTCGCAAGGAGAGTGGAGAGGCGCTAACAGAGTTCGTATTGTCTGCAAATGACTCGGTGGTAGTTTGT
ATTGATGCTCCATGGGGACAAGGAAAGACAACTTTCCTTAGAATGTGGGAGCAGCATTTAAAGAACAACGAAATACCAAC
GATCTATTTCAATGCTTGGGAAAGTGATTTTTCTGATGATGCTCTTGTATGTCTTATAGGGGAGATAAGTGCATCGATCA
CTGAACTATCAAAAACTGGTGACGAGTCAAAAGCCAGAGAATACCTTGGCAAAACTAAAGATATCGGTGTTGCACTTTTA
AAGCGTTCAGTTCCCGTAGCGGCCAAGTTGGCAACGGCTGGCGCTCTGGATCTTGATAAGGTAACTGAACAGGCTCTTGC
AGGTTTAGCCGAATCGATAGCGAAAGAACAGCTAGAAAAATACGAAAACTCTAAGAAGTCCATAAAGTCATTTCGGGAGG
CCATATCCCAGTTAGCAAATAGTATAACTGACCCAGACAACCCTAAACCATTGGTGTTTATTATCGATGAACTTGATCGT
TGCAGGCCAAACTTTGCAATTGAAATTTTGGAAAAAGCAAAACACTTCTTCAGCGTGGAGAACATCGTCTTTGTTCTCGG
TGCGGACAAAAGTCAACTAGGTTCATCCATTAAAGCAATTTATGGTGAAGGACTGAATGTAGATGGCTACTTGCGAAGGT
TTATGGACTTTGACTATGTTCTTCCTCCGCCTGACAAAGGGCTTTTTGTAAAAGCCTTGTTCAAGAAATATTCATTTAAT
GAGTATTTTTCAAAGAAGAATGCAAGAGGTGTTCAATACGAAGGAGAGCAGTCTTTAGCGATGTTCTCAGAGTTATTTGA
GTTGTATGGTTTAACGCTACGTGAGCAGGAGCACTGCTGTTCGCTTCTTAGTCTTTCCATAAGAACAACACCTGAAAACT
ATAAATTGTTCCCACTTTTTCTTTGTTTTCTTATTGTATTGAAAGTCAAATCGCCCGATTTGTACAAGGAATTGATTGCT
GATGAGATCACTGTTTTTGAACTGCTGGAACGGTTTAAGACAAAACCTGGTGCCACCGATTTGCTTTTGAATAATTATGG
TACAGCGCTAGAGGCATACATTGTCACTTGTAAGTCACATAGTCATAGTTACGATGAAATATCGAATAAGTATCAAAGGG
TAATAGATTCCGGTTCTTCAAGCGAAGAAGAGAAACGACGTGCTCACAGAATATTGGAAATCATCAGAGATATTGACTGG
AACGGGGGCATTGGCTCTTTAGGTTATTTGCTAAAGAAAATTGAAATTGCTTCTCGATTTGAGGCGTGA

Upstream 100 bases:

>100_bases
TATACAAAAAAGCAGGGTTGTTGTCATTCTTTAGGGCTGTTGTGGAATATTTATTTCCGCTGATATTTGGGTTTTATGTG
GCAGTATTGGGGTTGCTGGG

Downstream 100 bases:

>100_bases
GCTGCTAACAAGCGCGTCAATTAGGACGCTCGCAAGCTCGCATCTATTACGCGAGCGTTATACGATAAGGAAGGCCAGTG
GCAGAATCTAGAAGCCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: P-Loop ATPase; KAP P-Loop Domain Protein; KAP P-Loop; KAP Family P-Loop Domain Protein; Kap P-Loop Domain Protein; KAP Family P-Loop Domain-Containing Protein; Phage T7 Exclusion Protein

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MVLLLLTSGGRRIKFALVPRCNLPAAPGVSSQREDRVILKSRDIEIIEDDPYRNDALSRKESGEALTEFVLSANDSVVVC
IDAPWGQGKTTFLRMWEQHLKNNEIPTIYFNAWESDFSDDALVCLIGEISASITELSKTGDESKAREYLGKTKDIGVALL
KRSVPVAAKLATAGALDLDKVTEQALAGLAESIAKEQLEKYENSKKSIKSFREAISQLANSITDPDNPKPLVFIIDELDR
CRPNFAIEILEKAKHFFSVENIVFVLGADKSQLGSSIKAIYGEGLNVDGYLRRFMDFDYVLPPPDKGLFVKALFKKYSFN
EYFSKKNARGVQYEGEQSLAMFSELFELYGLTLREQEHCCSLLSLSIRTTPENYKLFPLFLCFLIVLKVKSPDLYKELIA
DEITVFELLERFKTKPGATDLLLNNYGTALEAYIVTCKSHSHSYDEISNKYQRVIDSGSSSEEEKRRAHRILEIIRDIDW
NGGIGSLGYLLKKIEIASRFEA

Sequences:

>Translated_502_residues
MVLLLLTSGGRRIKFALVPRCNLPAAPGVSSQREDRVILKSRDIEIIEDDPYRNDALSRKESGEALTEFVLSANDSVVVC
IDAPWGQGKTTFLRMWEQHLKNNEIPTIYFNAWESDFSDDALVCLIGEISASITELSKTGDESKAREYLGKTKDIGVALL
KRSVPVAAKLATAGALDLDKVTEQALAGLAESIAKEQLEKYENSKKSIKSFREAISQLANSITDPDNPKPLVFIIDELDR
CRPNFAIEILEKAKHFFSVENIVFVLGADKSQLGSSIKAIYGEGLNVDGYLRRFMDFDYVLPPPDKGLFVKALFKKYSFN
EYFSKKNARGVQYEGEQSLAMFSELFELYGLTLREQEHCCSLLSLSIRTTPENYKLFPLFLCFLIVLKVKSPDLYKELIA
DEITVFELLERFKTKPGATDLLLNNYGTALEAYIVTCKSHSHSYDEISNKYQRVIDSGSSSEEEKRRAHRILEIIRDIDW
NGGIGSLGYLLKKIEIASRFEA
>Mature_502_residues
MVLLLLTSGGRRIKFALVPRCNLPAAPGVSSQREDRVILKSRDIEIIEDDPYRNDALSRKESGEALTEFVLSANDSVVVC
IDAPWGQGKTTFLRMWEQHLKNNEIPTIYFNAWESDFSDDALVCLIGEISASITELSKTGDESKAREYLGKTKDIGVALL
KRSVPVAAKLATAGALDLDKVTEQALAGLAESIAKEQLEKYENSKKSIKSFREAISQLANSITDPDNPKPLVFIIDELDR
CRPNFAIEILEKAKHFFSVENIVFVLGADKSQLGSSIKAIYGEGLNVDGYLRRFMDFDYVLPPPDKGLFVKALFKKYSFN
EYFSKKNARGVQYEGEQSLAMFSELFELYGLTLREQEHCCSLLSLSIRTTPENYKLFPLFLCFLIVLKVKSPDLYKELIA
DEITVFELLERFKTKPGATDLLLNNYGTALEAYIVTCKSHSHSYDEISNKYQRVIDSGSSSEEEKRRAHRILEIIRDIDW
NGGIGSLGYLLKKIEIASRFEA

Specific function: Unknown

COG id: COG4928

COG function: function code R; Predicted P-loop ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56518; Mature: 56518

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLLLTSGGRRIKFALVPRCNLPAAPGVSSQREDRVILKSRDIEIIEDDPYRNDALSRK
CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCHHHCCH
ESGEALTEFVLSANDSVVVCIDAPWGQGKTTFLRMWEQHLKNNEIPTIYFNAWESDFSDD
HCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
ALVCLIGEISASITELSKTGDESKAREYLGKTKDIGVALLKRSVPVAAKLATAGALDLDK
EEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHH
VTEQALAGLAESIAKEQLEKYENSKKSIKSFREAISQLANSITDPDNPKPLVFIIDELDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
CRPNFAIEILEKAKHFFSVENIVFVLGADKSQLGSSIKAIYGEGLNVDGYLRRFMDFDYV
CCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
LPPPDKGLFVKALFKKYSFNEYFSKKNARGVQYEGEQSLAMFSELFELYGLTLREQEHCC
CCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
SLLSLSIRTTPENYKLFPLFLCFLIVLKVKSPDLYKELIADEITVFELLERFKTKPGATD
HHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLLNNYGTALEAYIVTCKSHSHSYDEISNKYQRVIDSGSSSEEEKRRAHRILEIIRDIDW
HHHHCCCHHEEEHEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
NGGIGSLGYLLKKIEIASRFEA
CCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLLLLTSGGRRIKFALVPRCNLPAAPGVSSQREDRVILKSRDIEIIEDDPYRNDALSRK
CEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCHHHCCH
ESGEALTEFVLSANDSVVVCIDAPWGQGKTTFLRMWEQHLKNNEIPTIYFNAWESDFSDD
HCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
ALVCLIGEISASITELSKTGDESKAREYLGKTKDIGVALLKRSVPVAAKLATAGALDLDK
EEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHH
VTEQALAGLAESIAKEQLEKYENSKKSIKSFREAISQLANSITDPDNPKPLVFIIDELDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
CRPNFAIEILEKAKHFFSVENIVFVLGADKSQLGSSIKAIYGEGLNVDGYLRRFMDFDYV
CCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
LPPPDKGLFVKALFKKYSFNEYFSKKNARGVQYEGEQSLAMFSELFELYGLTLREQEHCC
CCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
SLLSLSIRTTPENYKLFPLFLCFLIVLKVKSPDLYKELIADEITVFELLERFKTKPGATD
HHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LLLNNYGTALEAYIVTCKSHSHSYDEISNKYQRVIDSGSSSEEEKRRAHRILEIIRDIDW
HHHHCCCHHEEEHEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
NGGIGSLGYLLKKIEIASRFEA
CCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA