| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110835155
Identifier: 110835155
GI number: 110835155
Start: 2616253
End: 2617575
Strand: Reverse
Name: 110835155
Synonym: ABO_2294
Alternate gene names: NA
Gene position: 2617575-2616253 (Counterclockwise)
Preceding gene: 110835156
Following gene: 110835154
Centisome position: 83.89
GC content: 49.21
Gene sequence:
>1323_bases ATGACGGCACTGTCAGATTTGCAACATAGATGCTGGGATGAGATTGAGCCTTTCTCTCTTGAGCTAGCGCAAGAAACGTT GGTGGCTAAGAGCATTTTGCGGCATTTACCTGGGAAAAGGTTGGTGGTGAATGGCCGCTGGCAGGGGCAGCCGGTGATTG CCAAACTGTTTTTTAATGACAAAAAAGCAGTTGGTCAGCATGAGTATGCCTTGCTGAGAAAGTTGGCGTCCCAAGGTGTT CAGGTGCCGGAAACGATTGCTGTATTGGAGCAGGGAGCTCATACGGTTCTGTTGATGAAGCCGGTGGTGGGGGCTGAGCT GGGTACGTTATTGGAGAAGACGTTTAACCCTGCTTTGCTGCAAAGTTTATTGGACACCGTGTGGCAGTTGTATGACGCTG GCTGGATACAGACCGACTTACATCTAGGAAATTTTCTGGTGGATGAGGCAAGGGGTATCGTCTGTCTGGATGCAGGTGAA ATTAGGCCCGTCCCTTCAAAGAGAGGCTCGCGTGCGCTGGTGGATAATCTGGCTCTGATGTGCTCCCAAGCTTCATTAGC ACTGCAGGACCAATTAATTCTTCAGTGTTATCAGTTCATGCGAGCCCGGGGTGTCGATGGCTGTGATTTCGAAAATAAGT GCCGTAAGTTCCTACTGAAGAGGATGGTGCAAGCGGATAGAAAGTGGCAGCGTAACTGTTCTGCGATCCGTCTGGAGTCG ATAAAAGACGGCGTTGCATACATTGATCGTGAATATCGAGATAAGGCTCGTACTTGGTTGGCGTACTGTGAAAACCCAGA GGGGTTGCCGCTGATAAAGAAAGGTAGTCGTATCAGTGTATTCGCAGACGAATCCTGGGTTGTAAAGCATTATCAAGAGT CTAGTTTGAAGGCCCGCCTCAAACAAAAAATGAAACACTCTAGGGGTATGATTAGTTGGCGCCAAGGTTGGCTGTGGGCG CTACTCGGAATACCAACGCCTCGTCCGGTTATGCTCGTTGAATTCACTGAAGGTGTACGAGCGGGAACCAGTGTTATCGT TTTTCCGAGACTGCAATCGCAGGCGCTAAGCCTAGTGATGGAGCAGCAGCGCTCCCGAGCGGAACATTTGGCAGAGAGTG TGCGGTTATGGTTGGAGCGATTTCTCTGGGCGGGCATTAGTCATGGAGATATGAAGGCGCAGAATATCTTGGTCAACGAT AATGACGATATCAGCTTTATTGATCTTGATAATGCGAGTTTCAGTGTACGCGCCCGCCGGGCAAAAGCAAAAAATAGAAA AGACAGGATGCGGTTCGAAAGAAACTGGGAGCAATTTAGATAA
Upstream 100 bases:
>100_bases ACGGAGATGTCCGTCGTTTATACGGGCAACTTTTCAGGGAGTCCCCTTTTATGGCCATGCAGCCTCGTTATATACGCCGC CTGATCAAGAGCCTGATGAA
Downstream 100 bases:
>100_bases CGATGACGAAAAATCTTATTCTGTCTGTGGATAGCCCTAGATCACTTGCCTGCATGGCGATAATCGGAAGCTTAGCTCTT TCTCTGTTGGCATTTATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTALSDLQHRCWDEIEPFSLELAQETLVAKSILRHLPGKRLVVNGRWQGQPVIAKLFFNDKKAVGQHEYALLRKLASQGV QVPETIAVLEQGAHTVLLMKPVVGAELGTLLEKTFNPALLQSLLDTVWQLYDAGWIQTDLHLGNFLVDEARGIVCLDAGE IRPVPSKRGSRALVDNLALMCSQASLALQDQLILQCYQFMRARGVDGCDFENKCRKFLLKRMVQADRKWQRNCSAIRLES IKDGVAYIDREYRDKARTWLAYCENPEGLPLIKKGSRISVFADESWVVKHYQESSLKARLKQKMKHSRGMISWRQGWLWA LLGIPTPRPVMLVEFTEGVRAGTSVIVFPRLQSQALSLVMEQQRSRAEHLAESVRLWLERFLWAGISHGDMKAQNILVND NDDISFIDLDNASFSVRARRAKAKNRKDRMRFERNWEQFR
Sequences:
>Translated_440_residues MTALSDLQHRCWDEIEPFSLELAQETLVAKSILRHLPGKRLVVNGRWQGQPVIAKLFFNDKKAVGQHEYALLRKLASQGV QVPETIAVLEQGAHTVLLMKPVVGAELGTLLEKTFNPALLQSLLDTVWQLYDAGWIQTDLHLGNFLVDEARGIVCLDAGE IRPVPSKRGSRALVDNLALMCSQASLALQDQLILQCYQFMRARGVDGCDFENKCRKFLLKRMVQADRKWQRNCSAIRLES IKDGVAYIDREYRDKARTWLAYCENPEGLPLIKKGSRISVFADESWVVKHYQESSLKARLKQKMKHSRGMISWRQGWLWA LLGIPTPRPVMLVEFTEGVRAGTSVIVFPRLQSQALSLVMEQQRSRAEHLAESVRLWLERFLWAGISHGDMKAQNILVND NDDISFIDLDNASFSVRARRAKAKNRKDRMRFERNWEQFR >Mature_439_residues TALSDLQHRCWDEIEPFSLELAQETLVAKSILRHLPGKRLVVNGRWQGQPVIAKLFFNDKKAVGQHEYALLRKLASQGVQ VPETIAVLEQGAHTVLLMKPVVGAELGTLLEKTFNPALLQSLLDTVWQLYDAGWIQTDLHLGNFLVDEARGIVCLDAGEI RPVPSKRGSRALVDNLALMCSQASLALQDQLILQCYQFMRARGVDGCDFENKCRKFLLKRMVQADRKWQRNCSAIRLESI KDGVAYIDREYRDKARTWLAYCENPEGLPLIKKGSRISVFADESWVVKHYQESSLKARLKQKMKHSRGMISWRQGWLWAL LGIPTPRPVMLVEFTEGVRAGTSVIVFPRLQSQALSLVMEQQRSRAEHLAESVRLWLERFLWAGISHGDMKAQNILVNDN DDISFIDLDNASFSVRARRAKAKNRKDRMRFERNWEQFR
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50423; Mature: 50292
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00108 PROTEIN_KINASE_ST
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSDLQHRCWDEIEPFSLELAQETLVAKSILRHLPGKRLVVNGRWQGQPVIAKLFFND CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECC KKAVGQHEYALLRKLASQGVQVPETIAVLEQGAHTVLLMKPVVGAELGTLLEKTFNPALL CHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHH QSLLDTVWQLYDAGWIQTDLHLGNFLVDEARGIVCLDAGEIRPVPSKRGSRALVDNLALM HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH CSQASLALQDQLILQCYQFMRARGVDGCDFENKCRKFLLKRMVQADRKWQRNCSAIRLES HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH IKDGVAYIDREYRDKARTWLAYCENPEGLPLIKKGSRISVFADESWVVKHYQESSLKARL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHH KQKMKHSRGMISWRQGWLWALLGIPTPRPVMLVEFTEGVRAGTSVIVFPRLQSQALSLVM HHHHHHHCCCCCHHCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH EQQRSRAEHLAESVRLWLERFLWAGISHGDMKAQNILVNDNDDISFIDLDNASFSVRARR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHH AKAKNRKDRMRFERNWEQFR HHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure TALSDLQHRCWDEIEPFSLELAQETLVAKSILRHLPGKRLVVNGRWQGQPVIAKLFFND CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECC KKAVGQHEYALLRKLASQGVQVPETIAVLEQGAHTVLLMKPVVGAELGTLLEKTFNPALL CHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHH QSLLDTVWQLYDAGWIQTDLHLGNFLVDEARGIVCLDAGEIRPVPSKRGSRALVDNLALM HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH CSQASLALQDQLILQCYQFMRARGVDGCDFENKCRKFLLKRMVQADRKWQRNCSAIRLES HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH IKDGVAYIDREYRDKARTWLAYCENPEGLPLIKKGSRISVFADESWVVKHYQESSLKARL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHH KQKMKHSRGMISWRQGWLWALLGIPTPRPVMLVEFTEGVRAGTSVIVFPRLQSQALSLVM HHHHHHHCCCCCHHCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH EQQRSRAEHLAESVRLWLERFLWAGISHGDMKAQNILVNDNDDISFIDLDNASFSVRARR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHH AKAKNRKDRMRFERNWEQFR HHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA