| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yejM [H]
Identifier: 110835126
GI number: 110835126
Start: 2584659
End: 2586500
Strand: Reverse
Name: yejM [H]
Synonym: ABO_2265
Alternate gene names: 110835126
Gene position: 2586500-2584659 (Counterclockwise)
Preceding gene: 110835127
Following gene: 110835125
Centisome position: 82.9
GC content: 56.84
Gene sequence:
>1842_bases GTGGTTGTGATGTGCCAGCAGCGTCTTGGCAGGATATCCCTGCGCGGTTATTACGTCTTTCTTTTCTTGTTGTTTTTTAT TCTCAACGCCTGGGTTGGGCGAGGCACGCTGGTTGTCTTGCCGTCTCTGAGTCTGCTCTTCATGCTCGTGGCCCTGAGTG GTTACGCTTTCCTCTATGTGCTGTTGGTGGCTGCGCTGGGTTGGTTGTTGGGTAACCTTCCGGGGCGCAGTGTGCAGGCG GTGGGGGTGGTGGTGCTGGCGGCGTTGATGACGATGCTGTTGTTGGTCGATGGTCAGATCTATGCCATTTACGGCTTTCA TATTAATGGCTTTGTCTGGAACCTGATTACCACCCCGGGTGGAATTGAATCCATGGGCGGCAGTGCGGGAACGTCCTGGA CCGTGGCCGCTATCTGTGTGGCGGTGCTGCTGATTCACGGCGTTGTGCTGTACGTGCTGCGTTCCCGTTCCGTGCCGCGC TTGGGGCTGCTGGTGTCCTTGTTGGTGTTGTGCATGGTGGGGGAGCGTGCGGCCTACGGTGTCAGCCACCTGAAAGGGTA TCGCCCGGTGCTGATGGCGGCCCAGAGTATTCCCTTCTACCAGCCCACCACGTTTCGCCGGGTGGCGGAAAAGTGGGGGA TAACTATGGTGCGCAGCACTCGTCTGGAAGCCGATGCCAAAGGGCGTTTGAATTACCCGAAGGAGCCATTGCGAGTTAGT GCCGATGCGCCCCGTCCTAACCTCCTCGTGCTAGTGGCAGAATCGTTGCGTTGGGATATGCTGACACCGGAGATTATGCC GAACCTGTGGCGATTCTCTGCGCAGCACGGGATTCGGTTTACCCAGCATTATAGCGGGGGTAATGGCACCCGAATGGGTC TGTTTAGTCTGTTCTACGGTTTGCCCGGCAATTACTGGTTCAGTGTGCTTGATGAGCGCAAGCCCCCTTTGCTGATGCAG CAGTTGCAGCAGGCGGGGTACCACATGGGGCTGTATACCAGTGCCAATTTCAGTTATCCGGAGTTCGACAAAACCCTTTT TGTGTCGGTGCCTGAGAAGGATATGCTCAGTGATGATGTGGGGCCGGGTTGGCAGCGGGATCGTCGTAATGTAGAGCGGT TACTGGATTTTTTCGGCGAACAAAAAGTCGGCATGCCATTCATGGGGTTCATGTTCTTTGAGTCCGCCCATGCGCGTTAT TATTTCCCGGATGAGAGCGTGATCCGTAAGGATTATCTGCCAGAGATGAACTACGCCACCATGGATTTGAAGGCGGATAT GCCCGGTATCTTTCGTCGTTATGTCAACGCTTCCCACCACCTGGATCAGCAATTGGGGCGAGTGCTTGGCTTCATGAAGG CGAGCGGGAGGCTGGACAATACCATTGTGGTTGTTACTGGCGATCACGGGGAAGAGTTTATGGAAAACGGCCGTTGGGGG CACAATTCCGAATTCCATAACGAGCAAATTCATGTGCCGCTGGTGCTGGCGTTTCCGGGCAATGTGCCGGGGGTGGTGAC GCGGCCCACCAGCCACCTGGATGTGGTGCCTACCTTGTTGCCCATGCTGGGGGTGCAGAACCCCGCCAGCGATTATAGCG TGGGGCACTCTCTGCTGGGGCCGCAAGGTGATGCCTACCGGCTGGTGGCCAGTTGGGATGCGCTGGCGTATGTGGGGCCG GACTACAAAGTAGCCATGCCTTTGGGGGCGGGCGGGTTGTTAGAAATGCGCATAAGCGATGCGCACGATGGTCCGGTGAG CGAGCCCGACACTGTGTTGGCGCAGCTCAGCGAGGCGTTGGCTGATGTGTTGCGGGACCTCTCTGCTTTTTTTCGTAAGT AG
Upstream 100 bases:
>100_bases AATTTGCAGTGGCTGGGCCGGTGTTAGCCGAACAAAAAGAGGGTTGATTTAAGCTCATTTTAAGCTTGTGGAAATAGGCT TTTATGCCCTGTTTCCATGA
Downstream 100 bases:
>100_bases CGGGTTGAGGCGGGGCGATTGGGAGGATGCGCCTTAGGCCGACCATTGCTATACTGCGCCGCCCAAATTTTGAGCTGTCC CCACAGCAACGCAGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MVVMCQQRLGRISLRGYYVFLFLLFFILNAWVGRGTLVVLPSLSLLFMLVALSGYAFLYVLLVAALGWLLGNLPGRSVQA VGVVVLAALMTMLLLVDGQIYAIYGFHINGFVWNLITTPGGIESMGGSAGTSWTVAAICVAVLLIHGVVLYVLRSRSVPR LGLLVSLLVLCMVGERAAYGVSHLKGYRPVLMAAQSIPFYQPTTFRRVAEKWGITMVRSTRLEADAKGRLNYPKEPLRVS ADAPRPNLLVLVAESLRWDMLTPEIMPNLWRFSAQHGIRFTQHYSGGNGTRMGLFSLFYGLPGNYWFSVLDERKPPLLMQ QLQQAGYHMGLYTSANFSYPEFDKTLFVSVPEKDMLSDDVGPGWQRDRRNVERLLDFFGEQKVGMPFMGFMFFESAHARY YFPDESVIRKDYLPEMNYATMDLKADMPGIFRRYVNASHHLDQQLGRVLGFMKASGRLDNTIVVVTGDHGEEFMENGRWG HNSEFHNEQIHVPLVLAFPGNVPGVVTRPTSHLDVVPTLLPMLGVQNPASDYSVGHSLLGPQGDAYRLVASWDALAYVGP DYKVAMPLGAGGLLEMRISDAHDGPVSEPDTVLAQLSEALADVLRDLSAFFRK
Sequences:
>Translated_613_residues MVVMCQQRLGRISLRGYYVFLFLLFFILNAWVGRGTLVVLPSLSLLFMLVALSGYAFLYVLLVAALGWLLGNLPGRSVQA VGVVVLAALMTMLLLVDGQIYAIYGFHINGFVWNLITTPGGIESMGGSAGTSWTVAAICVAVLLIHGVVLYVLRSRSVPR LGLLVSLLVLCMVGERAAYGVSHLKGYRPVLMAAQSIPFYQPTTFRRVAEKWGITMVRSTRLEADAKGRLNYPKEPLRVS ADAPRPNLLVLVAESLRWDMLTPEIMPNLWRFSAQHGIRFTQHYSGGNGTRMGLFSLFYGLPGNYWFSVLDERKPPLLMQ QLQQAGYHMGLYTSANFSYPEFDKTLFVSVPEKDMLSDDVGPGWQRDRRNVERLLDFFGEQKVGMPFMGFMFFESAHARY YFPDESVIRKDYLPEMNYATMDLKADMPGIFRRYVNASHHLDQQLGRVLGFMKASGRLDNTIVVVTGDHGEEFMENGRWG HNSEFHNEQIHVPLVLAFPGNVPGVVTRPTSHLDVVPTLLPMLGVQNPASDYSVGHSLLGPQGDAYRLVASWDALAYVGP DYKVAMPLGAGGLLEMRISDAHDGPVSEPDTVLAQLSEALADVLRDLSAFFRK >Mature_613_residues MVVMCQQRLGRISLRGYYVFLFLLFFILNAWVGRGTLVVLPSLSLLFMLVALSGYAFLYVLLVAALGWLLGNLPGRSVQA VGVVVLAALMTMLLLVDGQIYAIYGFHINGFVWNLITTPGGIESMGGSAGTSWTVAAICVAVLLIHGVVLYVLRSRSVPR LGLLVSLLVLCMVGERAAYGVSHLKGYRPVLMAAQSIPFYQPTTFRRVAEKWGITMVRSTRLEADAKGRLNYPKEPLRVS ADAPRPNLLVLVAESLRWDMLTPEIMPNLWRFSAQHGIRFTQHYSGGNGTRMGLFSLFYGLPGNYWFSVLDERKPPLLMQ QLQQAGYHMGLYTSANFSYPEFDKTLFVSVPEKDMLSDDVGPGWQRDRRNVERLLDFFGEQKVGMPFMGFMFFESAHARY YFPDESVIRKDYLPEMNYATMDLKADMPGIFRRYVNASHHLDQQLGRVLGFMKASGRLDNTIVVVTGDHGEEFMENGRWG HNSEFHNEQIHVPLVLAFPGNVPGVVTRPTSHLDVVPTLLPMLGVQNPASDYSVGHSLLGPQGDAYRLVASWDALAYVGP DYKVAMPLGAGGLLEMRISDAHDGPVSEPDTVLAQLSEALADVLRDLSAFFRK
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=566, Percent_Identity=27.9151943462898, Blast_Score=179, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 68218; Mature: 68218
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMCQQRLGRISLRGYYVFLFLLFFILNAWVGRGTLVVLPSLSLLFMLVALSGYAFLYV CEEEECHHCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH LLVAALGWLLGNLPGRSVQAVGVVVLAALMTMLLLVDGQIYAIYGFHINGFVWNLITTPG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCC GIESMGGSAGTSWTVAAICVAVLLIHGVVLYVLRSRSVPRLGLLVSLLVLCMVGERAAYG CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH VSHLKGYRPVLMAAQSIPFYQPTTFRRVAEKWGITMVRSTRLEADAKGRLNYPKEPLRVS HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCEEE ADAPRPNLLVLVAESLRWDMLTPEIMPNLWRFSAQHGIRFTQHYSGGNGTRMGLFSLFYG CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH LPGNYWFSVLDERKPPLLMQQLQQAGYHMGLYTSANFSYPEFDKTLFVSVPEKDMLSDDV CCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHCCCC GPGWQRDRRNVERLLDFFGEQKVGMPFMGFMFFESAHARYYFPDESVIRKDYLPEMNYAT CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCEE MDLKADMPGIFRRYVNASHHLDQQLGRVLGFMKASGRLDNTIVVVTGDHGEEFMENGRWG EEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCC HNSEFHNEQIHVPLVLAFPGNVPGVVTRPTSHLDVVPTLLPMLGVQNPASDYSVGHSLLG CCCCCCCCEEEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHCC PQGDAYRLVASWDALAYVGPDYKVAMPLGAGGLLEMRISDAHDGPVSEPDTVLAQLSEAL CCCCCEEEEEECCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH ADVLRDLSAFFRK HHHHHHHHHHHCC >Mature Secondary Structure MVVMCQQRLGRISLRGYYVFLFLLFFILNAWVGRGTLVVLPSLSLLFMLVALSGYAFLYV CEEEECHHCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH LLVAALGWLLGNLPGRSVQAVGVVVLAALMTMLLLVDGQIYAIYGFHINGFVWNLITTPG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCC GIESMGGSAGTSWTVAAICVAVLLIHGVVLYVLRSRSVPRLGLLVSLLVLCMVGERAAYG CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH VSHLKGYRPVLMAAQSIPFYQPTTFRRVAEKWGITMVRSTRLEADAKGRLNYPKEPLRVS HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCEEE ADAPRPNLLVLVAESLRWDMLTPEIMPNLWRFSAQHGIRFTQHYSGGNGTRMGLFSLFYG CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH LPGNYWFSVLDERKPPLLMQQLQQAGYHMGLYTSANFSYPEFDKTLFVSVPEKDMLSDDV CCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHCCCC GPGWQRDRRNVERLLDFFGEQKVGMPFMGFMFFESAHARYYFPDESVIRKDYLPEMNYAT CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCEE MDLKADMPGIFRRYVNASHHLDQQLGRVLGFMKASGRLDNTIVVVTGDHGEEFMENGRWG EEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCC HNSEFHNEQIHVPLVLAFPGNVPGVVTRPTSHLDVVPTLLPMLGVQNPASDYSVGHSLLG CCCCCCCCEEEEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHCC PQGDAYRLVASWDALAYVGPDYKVAMPLGAGGLLEMRISDAHDGPVSEPDTVLAQLSEAL CCCCCEEEEEECCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH ADVLRDLSAFFRK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]