| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yjeE [H]
Identifier: 110835068
GI number: 110835068
Start: 2520026
End: 2520454
Strand: Reverse
Name: yjeE [H]
Synonym: ABO_2207
Alternate gene names: 110835068
Gene position: 2520454-2520026 (Counterclockwise)
Preceding gene: 110835069
Following gene: 110835067
Centisome position: 80.78
GC content: 58.28
Gene sequence:
>429_bases ATGAGTGTGGAGTGCTACGCATTAGCGGATGAGGCGGCAACGCTGGCACTGGGGGCTGAATTGGGCCACCGCTTGGCGGC GGGCGGCTGCGTTTATCTTGAAGGCGATCTCGGGGCGGGGAAAACCACCCTGGTTCGCGGTATCCTCCGTGGCCTGGGGC ATAACGGAGCGGTAAAGAGTCCGACGTATACTATTGTGGAACCCTATGAGATTCGGGGCGTCCATATCTATCACTTTGAC CTGTATCGTCTGTCGGATCCGGAAGAACTGGAGTTGATCGGCGTACGGGAGTATTTCGATGCTGGCTCGCTGTGTCTGTT GGAGTGGCCGGAACGCGGAGCAGGCGTGGTGCCAGCACCGGATTTGACCATTACACTGGCCGTGAATGGCCACGGACGAA AAGCGACCCTGGAATGGGGTAGCGATTAA
Upstream 100 bases:
>100_bases GTGCAGCAGCGCAGGGTCAGAGGGGCTTGCTAGCCACCGATTTGCTCCCGGCCCTGCGCCAACAATTGAATTATGGATTG CCGCAAGGAGTCGGTCGCCA
Downstream 100 bases:
>100_bases ACGCCTATGACAATGCGGAAAACTGTAGCGGTAGCTTTTCTTTCTCTGTTGGCTTTGTGCTGGAGCTCACTGGTGTTTGC CCAGACCACGATTGATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSVECYALADEAATLALGAELGHRLAAGGCVYLEGDLGAGKTTLVRGILRGLGHNGAVKSPTYTIVEPYEIRGVHIYHFD LYRLSDPEELELIGVREYFDAGSLCLLEWPERGAGVVPAPDLTITLAVNGHGRKATLEWGSD
Sequences:
>Translated_142_residues MSVECYALADEAATLALGAELGHRLAAGGCVYLEGDLGAGKTTLVRGILRGLGHNGAVKSPTYTIVEPYEIRGVHIYHFD LYRLSDPEELELIGVREYFDAGSLCLLEWPERGAGVVPAPDLTITLAVNGHGRKATLEWGSD >Mature_141_residues SVECYALADEAATLALGAELGHRLAAGGCVYLEGDLGAGKTTLVRGILRGLGHNGAVKSPTYTIVEPYEIRGVHIYHFDL YRLSDPEELELIGVREYFDAGSLCLLEWPERGAGVVPAPDLTITLAVNGHGRKATLEWGSD
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=135, Percent_Identity=52.5925925925926, Blast_Score=155, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15210; Mature: 15079
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVECYALADEAATLALGAELGHRLAAGGCVYLEGDLGAGKTTLVRGILRGLGHNGAVKS CCEEEEEECCCCEEEEECHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTIVEPYEIRGVHIYHFDLYRLSDPEELELIGVREYFDAGSLCLLEWPERGAGVVPAP CEEEEECCEEECEEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DLTITLAVNGHGRKATLEWGSD CEEEEEEECCCCCEEEEECCCC >Mature Secondary Structure SVECYALADEAATLALGAELGHRLAAGGCVYLEGDLGAGKTTLVRGILRGLGHNGAVKS CEEEEEECCCCEEEEECHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTIVEPYEIRGVHIYHFDLYRLSDPEELELIGVREYFDAGSLCLLEWPERGAGVVPAP CEEEEECCEEECEEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DLTITLAVNGHGRKATLEWGSD CEEEEEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]