| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834905
Identifier: 110834905
GI number: 110834905
Start: 2331452
End: 2332456
Strand: Reverse
Name: 110834905
Synonym: ABO_2044
Alternate gene names: NA
Gene position: 2332456-2331452 (Counterclockwise)
Preceding gene: 110834912
Following gene: 110834904
Centisome position: 74.75
GC content: 55.62
Gene sequence:
>1005_bases ATGCAGCCTGATAAAAGTAAATCCGGAGTAACTTCGGACCCGAGAAAACACGCCATCGACCAATGGGTAAGTGCTTACCT TGGAGAATCAGTGGTTGGTGAGCCTGCGTCAGCGGATGCCAGCTTCCGTCGTTATTTCCGTTATTTTCATGGGGATAGCA GCTTGGTGGCCATGGATGCGCCGCCGACACAGGAAAATTGTCGCCCTTTCGTGGATATCGCCGGGCGCCTTAAACGAGCA GGTCTGCATGTGCCAGATATTGTTCATCAGGATTTGCAGCAGGGCTTTTTGTTGCTCAGCGATATGGGCACGCAGACGTG GCTGAACGCCCTAAATGAGGCTAATGCCGATGAGTGGTATAGCGCTGCCATCGATACCCTGATTACCCAGCAATTGCATG CCGATACCGCGGGGCTGCCGCAGTACGATGAAGCATTGCTGCAACGGGAGCTGGAACTGTTCCCCCAGTGGTACCTGTTC CGCCATCGTGAAAAGGTGGTCACCGGAGAGTTGCGCCAACGGTTGGACCGGGTGTTTGATGTGCTGATTCGTTCAGCCTT AGCGCAGCCGCAGGTATTTGTGCATCGCGATTATATGCCGCGTAATCTAATGGTGTCCGACCCGAATCCTGGGGTGATCG ATTTTCAGGATGCGGTGGCCGGCCCCATCAGCTATGACGTGATCAGCCTGTTTAAGGATGCTTTTTTGAGCTGGCCAGAA GAGCGCGTGCTTGGCTGGCTGGGCGAGTATTTCGACAAGGCCACGGCGGCAGGGCTGCCGGTGCCGGCGGACTTCGATAC CTTCTTGCGCGATTGCGACCTGATGGGCGCCCAGCGTCATATCAAGGTGATCGGTATTTTTGCGCGTATCTGCCACCGCG ATGGCAAGCCCAAGTATTTGGGCGATGTGCCGCGTTTCTTTGCTTACTTGCGCACGGTTATCGCCCGGCGCCCGGAGCTT TGCGATCTACAGTGGGTTCTCGATCAGATCGAGGACAACCAGTGA
Upstream 100 bases:
>100_bases CAGTGGCATCAGCTGCTCAGAACAGGTAAAAAGGCCGTTTTATGGCGGGCCGGGCTTTCCGTTCCACCAAAAGCGGCAGT GTAATCTAACAAGGAAGGCA
Downstream 100 bases:
>100_bases AGGCCATGATCCTGGCCGCCGGCTACGGCAAGCGCATGCGCCCGCTCACCGACCACACCCCCAAGCCGCTATTGCGGGCG GGGGGCAAGGCGTTGATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Related Ser/Thr Protein Kinase; Phosphotransferase Family; Chlorosome Protein; Phosphotransferase Family Protein; .5 Kda Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; Serine/Threonine Protein Kinase; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MQPDKSKSGVTSDPRKHAIDQWVSAYLGESVVGEPASADASFRRYFRYFHGDSSLVAMDAPPTQENCRPFVDIAGRLKRA GLHVPDIVHQDLQQGFLLLSDMGTQTWLNALNEANADEWYSAAIDTLITQQLHADTAGLPQYDEALLQRELELFPQWYLF RHREKVVTGELRQRLDRVFDVLIRSALAQPQVFVHRDYMPRNLMVSDPNPGVIDFQDAVAGPISYDVISLFKDAFLSWPE ERVLGWLGEYFDKATAAGLPVPADFDTFLRDCDLMGAQRHIKVIGIFARICHRDGKPKYLGDVPRFFAYLRTVIARRPEL CDLQWVLDQIEDNQ
Sequences:
>Translated_334_residues MQPDKSKSGVTSDPRKHAIDQWVSAYLGESVVGEPASADASFRRYFRYFHGDSSLVAMDAPPTQENCRPFVDIAGRLKRA GLHVPDIVHQDLQQGFLLLSDMGTQTWLNALNEANADEWYSAAIDTLITQQLHADTAGLPQYDEALLQRELELFPQWYLF RHREKVVTGELRQRLDRVFDVLIRSALAQPQVFVHRDYMPRNLMVSDPNPGVIDFQDAVAGPISYDVISLFKDAFLSWPE ERVLGWLGEYFDKATAAGLPVPADFDTFLRDCDLMGAQRHIKVIGIFARICHRDGKPKYLGDVPRFFAYLRTVIARRPEL CDLQWVLDQIEDNQ >Mature_334_residues MQPDKSKSGVTSDPRKHAIDQWVSAYLGESVVGEPASADASFRRYFRYFHGDSSLVAMDAPPTQENCRPFVDIAGRLKRA GLHVPDIVHQDLQQGFLLLSDMGTQTWLNALNEANADEWYSAAIDTLITQQLHADTAGLPQYDEALLQRELELFPQWYLF RHREKVVTGELRQRLDRVFDVLIRSALAQPQVFVHRDYMPRNLMVSDPNPGVIDFQDAVAGPISYDVISLFKDAFLSWPE ERVLGWLGEYFDKATAAGLPVPADFDTFLRDCDLMGAQRHIKVIGIFARICHRDGKPKYLGDVPRFFAYLRTVIARRPEL CDLQWVLDQIEDNQ
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38069; Mature: 38069
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDKSKSGVTSDPRKHAIDQWVSAYLGESVVGEPASADASFRRYFRYFHGDSSLVAMDA CCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECC PPTQENCRPFVDIAGRLKRAGLHVPDIVHQDLQQGFLLLSDMGTQTWLNALNEANADEWY CCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH SAAIDTLITQQLHADTAGLPQYDEALLQRELELFPQWYLFRHREKVVTGELRQRLDRVFD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIRSALAQPQVFVHRDYMPRNLMVSDPNPGVIDFQDAVAGPISYDVISLFKDAFLSWPE HHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEECHHHHCCCHHHHHHHHHHHHHHCCCH ERVLGWLGEYFDKATAAGLPVPADFDTFLRDCDLMGAQRHIKVIGIFARICHRDGKPKYL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH GDVPRFFAYLRTVIARRPELCDLQWVLDQIEDNQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQPDKSKSGVTSDPRKHAIDQWVSAYLGESVVGEPASADASFRRYFRYFHGDSSLVAMDA CCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECC PPTQENCRPFVDIAGRLKRAGLHVPDIVHQDLQQGFLLLSDMGTQTWLNALNEANADEWY CCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH SAAIDTLITQQLHADTAGLPQYDEALLQRELELFPQWYLFRHREKVVTGELRQRLDRVFD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIRSALAQPQVFVHRDYMPRNLMVSDPNPGVIDFQDAVAGPISYDVISLFKDAFLSWPE HHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEECHHHHCCCHHHHHHHHHHHHHHCCCH ERVLGWLGEYFDKATAAGLPVPADFDTFLRDCDLMGAQRHIKVIGIFARICHRDGKPKYL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH GDVPRFFAYLRTVIARRPELCDLQWVLDQIEDNQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA