| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834878
Identifier: 110834878
GI number: 110834878
Start: 2304055
End: 2305122
Strand: Direct
Name: 110834878
Synonym: ABO_2017
Alternate gene names: NA
Gene position: 2304055-2305122 (Clockwise)
Preceding gene: 110834877
Following gene: 110834879
Centisome position: 73.84
GC content: 53.18
Gene sequence:
>1068_bases ATGTCGAATCAAACGGCGGATATGTCACGTCTTGAGAATTTCATTCCTTTTGACTGCCTGAGCGAATCCCACCGCAATGA AATCCAGGGCCAAATCAGCGTCATCAAGATTGCCCCTGGCCGGCTCCTGTTCAAGCGCGGCCAAAGCAGCGACAAGGCCT ACTTCCTGATTAAAGGTTCGCTGGATCTCACCGATGCCAGTTTTCAGGTACGCCATTTTACCGCCGACGACGATGAAAAT TACCTGGCTATCGACAACTACGCCGAACACACCATCAATGCGATAACCGCCGAAGCCACCACTTTGTATGCCATCGACCG CACCAAGCTCGACCTGCTGATGACGTGGACCCAAGCCGCCGAGTCCATGCTGGACGATGAGGACGATGCAAATGAACGGG ACTGGATGGACGCGCTGCTTTCATCGGAACTGTTCTCAGCCGTGCCACCGGCCATGATTCACAGCCTGTTCGTAAAATTC CAGGAACGCGAAGTTCAACTAGGTGAAGTCATTGTCAAAGAAGGCGACCACGGCGACACCCTGTTCGTGATCAAACAGGG CAAAGCCATGGTTACCCGCATCAAAGGTGCCAAGCAGGAAACTCTCGCCGCCCTCTCCGCCGGTCGCTTCTTCGGTGAGG ATGCTTTGATCAGTGAAAGCCCTCGTAATGCCACCATTACCATGACCAGCGATGGCGTACTGATGTGCCTAGGGAAAAGT GACTTTCAAGCAATACTGCAAGATTCGGTGATTCGCCACCTCACCGAAGACGAACTGGACACCATGGTGCTTGAGGCAGA AGCAGCCTGCATCTTGGTGGATGTCCGCTTGCCCATGGAGTTTCGCCATGACCGAACTCCAGGCGCCCGCAACCTACCGC TCAATGAATTACGCCGCGAAGCTTTGAACTTAGAAAAGGATTTTTTCTACGTAGTATGCGGTGATGGTCGACGTAGCGAG CTCGGAGCCTATATCCTCTCCGAAGCAGGCTTAAGTGCCTATGTGCTTGACCGGGGAAAACCGACGGATGCAAAACAACA AACCCATGCAAAGGCTATTCAAGCCTGA
Upstream 100 bases:
>100_bases TACCGTGCAGTGGCCCGCGAAAAAGCATAAAGTACAGGCAACTAAGAATTAAAGGTGAGCCGGCTCCGGCTCACCCATCA ACACACCTTCGGGGGTTGCC
Downstream 100 bases:
>100_bases ATCGCTATTCTGGCTATTAGTCCTCGCGTTATGCGGCATAACCAATAGCGTTTTCGCAGATGCGCCTCCCCCTTTTGTGA TTCACAGCGAACCGGATCAG
Product: cAMP-dependent protein kinase regulatory chain
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSNQTADMSRLENFIPFDCLSESHRNEIQGQISVIKIAPGRLLFKRGQSSDKAYFLIKGSLDLTDASFQVRHFTADDDEN YLAIDNYAEHTINAITAEATTLYAIDRTKLDLLMTWTQAAESMLDDEDDANERDWMDALLSSELFSAVPPAMIHSLFVKF QEREVQLGEVIVKEGDHGDTLFVIKQGKAMVTRIKGAKQETLAALSAGRFFGEDALISESPRNATITMTSDGVLMCLGKS DFQAILQDSVIRHLTEDELDTMVLEAEAACILVDVRLPMEFRHDRTPGARNLPLNELRREALNLEKDFFYVVCGDGRRSE LGAYILSEAGLSAYVLDRGKPTDAKQQTHAKAIQA
Sequences:
>Translated_355_residues MSNQTADMSRLENFIPFDCLSESHRNEIQGQISVIKIAPGRLLFKRGQSSDKAYFLIKGSLDLTDASFQVRHFTADDDEN YLAIDNYAEHTINAITAEATTLYAIDRTKLDLLMTWTQAAESMLDDEDDANERDWMDALLSSELFSAVPPAMIHSLFVKF QEREVQLGEVIVKEGDHGDTLFVIKQGKAMVTRIKGAKQETLAALSAGRFFGEDALISESPRNATITMTSDGVLMCLGKS DFQAILQDSVIRHLTEDELDTMVLEAEAACILVDVRLPMEFRHDRTPGARNLPLNELRREALNLEKDFFYVVCGDGRRSE LGAYILSEAGLSAYVLDRGKPTDAKQQTHAKAIQA >Mature_354_residues SNQTADMSRLENFIPFDCLSESHRNEIQGQISVIKIAPGRLLFKRGQSSDKAYFLIKGSLDLTDASFQVRHFTADDDENY LAIDNYAEHTINAITAEATTLYAIDRTKLDLLMTWTQAAESMLDDEDDANERDWMDALLSSELFSAVPPAMIHSLFVKFQ EREVQLGEVIVKEGDHGDTLFVIKQGKAMVTRIKGAKQETLAALSAGRFFGEDALISESPRNATITMTSDGVLMCLGKSD FQAILQDSVIRHLTEDELDTMVLEAEAACILVDVRLPMEFRHDRTPGARNLPLNELRREALNLEKDFFYVVCGDGRRSEL GAYILSEAGLSAYVLDRGKPTDAKQQTHAKAIQA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322156, Length=248, Percent_Identity=24.5967741935484, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39591; Mature: 39460
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00888 CNMP_BINDING_1 ; PS50042 CNMP_BINDING_3 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQTADMSRLENFIPFDCLSESHRNEIQGQISVIKIAPGRLLFKRGQSSDKAYFLIKGS CCCCCHHHHHHHHCCCHHHHCHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEEEEEECC LDLTDASFQVRHFTADDDENYLAIDNYAEHTINAITAEATTLYAIDRTKLDLLMTWTQAA CEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHH ESMLDDEDDANERDWMDALLSSELFSAVPPAMIHSLFVKFQEREVQLGEVIVKEGDHGDT HHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEHEEEECCCCCCE LFVIKQGKAMVTRIKGAKQETLAALSAGRFFGEDALISESPRNATITMTSDGVLMCLGKS EEEEECCCEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCH DFQAILQDSVIRHLTEDELDTMVLEAEAACILVDVRLPMEFRHDRTPGARNLPLNELRRE HHHHHHHHHHHHHHCHHHHHHEEEECCCEEEEEEEECCHHHCCCCCCCCCCCCHHHHHHH ALNLEKDFFYVVCGDGRRSELGAYILSEAGLSAYVLDRGKPTDAKQQTHAKAIQA HHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SNQTADMSRLENFIPFDCLSESHRNEIQGQISVIKIAPGRLLFKRGQSSDKAYFLIKGS CCCCHHHHHHHHCCCHHHHCHHHHHHCCCEEEEEEECCCEEEEECCCCCCCEEEEEECC LDLTDASFQVRHFTADDDENYLAIDNYAEHTINAITAEATTLYAIDRTKLDLLMTWTQAA CEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHH ESMLDDEDDANERDWMDALLSSELFSAVPPAMIHSLFVKFQEREVQLGEVIVKEGDHGDT HHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEHEEEECCCCCCE LFVIKQGKAMVTRIKGAKQETLAALSAGRFFGEDALISESPRNATITMTSDGVLMCLGKS EEEEECCCEEEHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCH DFQAILQDSVIRHLTEDELDTMVLEAEAACILVDVRLPMEFRHDRTPGARNLPLNELRRE HHHHHHHHHHHHHHCHHHHHHEEEECCCEEEEEEEECCHHHCCCCCCCCCCCCHHHHHHH ALNLEKDFFYVVCGDGRRSELGAYILSEAGLSAYVLDRGKPTDAKQQTHAKAIQA HHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA