| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is resA [H]
Identifier: 110834867
GI number: 110834867
Start: 2291985
End: 2292428
Strand: Reverse
Name: resA [H]
Synonym: ABO_2006
Alternate gene names: 110834867
Gene position: 2292428-2291985 (Counterclockwise)
Preceding gene: 110834880
Following gene: 110834866
Centisome position: 73.47
GC content: 55.86
Gene sequence:
>444_bases ATGCGCTTTCTACGGGTGCTTGCCCTGCTGGTCATCCCCTGGCTGGCTCATGCGGAACCGTTGCCATTTTCCCCCGAGCA GGTCGGGGAAGCAAAAGTCATTTACGTAGACTTTTGGGCCAGCTGGTGCGTGCCTTGCCGGCGCTCGTTTCCTTGGCTGA ATCGGATGCAGGCGAAATATGGAGATCGTGGGTTCACCATCATCGGTGTGAATTTGGACCTGCGCAAAGAGGATGCAGAG AAGTTTCTGGCCAATTACCCGGCCACTTTCCCGTTGGTGTTTGACCCACAAGGGGAGCTGGCAAGCCGCTATCAGCTTCA AGGGATGCCCAGTGCCGTGCTGATGGATGAGCGCGGGAACGCGCTAGCCCGTCATATCGGTTTTATGGAAACAAATAAGG ACGCCTACGAGCAAGAAATCGTCCAGCTGCTGGAGGAGCAATGA
Upstream 100 bases:
>100_bases CAGGATAGCCGATAAGTTTCAGGGCAGATTATTAACAGTGCCTTAAGGTTACTTTAAGGCGCCGGTAGGAGGCTGTGGTC TCAATATCAAGGAGAAGCCT
Downstream 100 bases:
>100_bases TGAAATTTGCGTTGGGAATACCCGTGTTTCTGATCACTGTGGGCTGTGTGTCCGGGTGCCAGAACCTGGGGGTGCAACCC TGGGAGCGTGATTTGTTGGC
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ
Sequences:
>Translated_147_residues MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ >Mature_147_residues MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 16949; Mature: 16949
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKY CHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHC GDRGFTIIGVNLDLRKEDAEKFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGN CCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCC ALARHIGFMETNKDAYEQEIVQLLEEQ HHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKY CHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHC GDRGFTIIGVNLDLRKEDAEKFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGN CCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCC ALARHIGFMETNKDAYEQEIVQLLEEQ HHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA