Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834865

Identifier: 110834865

GI number: 110834865

Start: 2291097

End: 2291792

Strand: Reverse

Name: 110834865

Synonym: ABO_2004

Alternate gene names: NA

Gene position: 2291792-2291097 (Counterclockwise)

Preceding gene: 110834866

Following gene: 110834864

Centisome position: 73.45

GC content: 51.44

Gene sequence:

>696_bases
GTGGATTTGGTGGCGGTGGCTGTGGCTGTAATTGAGGAAGGCGTAATGAAAAAAAAACTGGATGGGAAGACGATTGGGAG
TGGCCTGGCCGCTGCGACCTGTGCTCTGCTGGGCCAGCCGGTACAGGCACAGCCCGCAGATGATGCCTGGCAATTTGATT
CCGCCGTGTTGTATTACGCGGAGCAAGATCGTGTCACGGCGGTGGAGCCAGTGGTTCGCGGCAAGAAACAGTTTGGTGAT
GACAGCGAGCTTGAACTGAAACTGACGCTGGATTCGTTAACTGGTGCATCCCATAACGGGGCGATCAAATCGGATAAGCC
GCAGACGTTTACTTCCCCGTCTGGTTCACAGGAATATCAGGCCACCAATGAGGTGCCGTTGGATGACTCCTTCAAGGACA
CGCGTGTTGCCGCAAACATGCAGTATACCCGCCCATTTAGCCGGACTATGCGATGGACGGCGGGGATGAATTTCTCCAAT
GAATATGATTTTACTTCTTTGGGCTTAAATGCTGGACTCTTATGGGATTTGAACAATAAAAACACCACGCTCACATTCGG
CCTAGCCCATGAGGCGGACACCATAGACCCGGTGGGCGGTGTACCGATTGGTTTGACGTTCCAGAGTAATCAACAAAAAA
ATGACGGCACTGAAGATCGAACTATAAATGATCTGTTGTTTGGATTACCCAGGTGA

Upstream 100 bases:

>100_bases
TTGTTGGCCAAACCAGTAATGACGATGGGTGCTGCGGATGGTCTCGATGATGCGCTGGATGATCACATCTATTTTAGCAA
GGAAGCCTCCAGCGGTGGGC

Downstream 100 bases:

>100_bases
TCAACCGTAACTGGCTGATGCAACTCAATTACAGCGTGTCGATATCGGACGGTTACCAGACAGACCCTTACAAGATTGTC
ACGGTAGTAGATGCTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDLVAVAVAVIEEGVMKKKLDGKTIGSGLAAATCALLGQPVQAQPADDAWQFDSAVLYYAEQDRVTAVEPVVRGKKQFGD
DSELELKLTLDSLTGASHNGAIKSDKPQTFTSPSGSQEYQATNEVPLDDSFKDTRVAANMQYTRPFSRTMRWTAGMNFSN
EYDFTSLGLNAGLLWDLNNKNTTLTFGLAHEADTIDPVGGVPIGLTFQSNQQKNDGTEDRTINDLLFGLPR

Sequences:

>Translated_231_residues
MDLVAVAVAVIEEGVMKKKLDGKTIGSGLAAATCALLGQPVQAQPADDAWQFDSAVLYYAEQDRVTAVEPVVRGKKQFGD
DSELELKLTLDSLTGASHNGAIKSDKPQTFTSPSGSQEYQATNEVPLDDSFKDTRVAANMQYTRPFSRTMRWTAGMNFSN
EYDFTSLGLNAGLLWDLNNKNTTLTFGLAHEADTIDPVGGVPIGLTFQSNQQKNDGTEDRTINDLLFGLPR
>Mature_231_residues
MDLVAVAVAVIEEGVMKKKLDGKTIGSGLAAATCALLGQPVQAQPADDAWQFDSAVLYYAEQDRVTAVEPVVRGKKQFGD
DSELELKLTLDSLTGASHNGAIKSDKPQTFTSPSGSQEYQATNEVPLDDSFKDTRVAANMQYTRPFSRTMRWTAGMNFSN
EYDFTSLGLNAGLLWDLNNKNTTLTFGLAHEADTIDPVGGVPIGLTFQSNQQKNDGTEDRTINDLLFGLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25071; Mature: 25071

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVAVAVAVIEEGVMKKKLDGKTIGSGLAAATCALLGQPVQAQPADDAWQFDSAVLYYA
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
EQDRVTAVEPVVRGKKQFGDDSELELKLTLDSLTGASHNGAIKSDKPQTFTSPSGSQEYQ
CCCCCEEHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATNEVPLDDSFKDTRVAANMQYTRPFSRTMRWTAGMNFSNEYDFTSLGLNAGLLWDLNNK
CCCCCCCCCCCCCCEEECCCEECCCHHHHEEECCCCCCCCCCCEEEECCCCEEEEEECCC
NTTLTFGLAHEADTIDPVGGVPIGLTFQSNQQKNDGTEDRTINDLLFGLPR
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MDLVAVAVAVIEEGVMKKKLDGKTIGSGLAAATCALLGQPVQAQPADDAWQFDSAVLYYA
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
EQDRVTAVEPVVRGKKQFGDDSELELKLTLDSLTGASHNGAIKSDKPQTFTSPSGSQEYQ
CCCCCEEHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATNEVPLDDSFKDTRVAANMQYTRPFSRTMRWTAGMNFSNEYDFTSLGLNAGLLWDLNNK
CCCCCCCCCCCCCCEEECCCEECCCHHHHEEECCCCCCCCCCCEEEECCCCEEEEEECCC
NTTLTFGLAHEADTIDPVGGVPIGLTFQSNQQKNDGTEDRTINDLLFGLPR
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA